RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 SPRYD7Q5W111 196 aa31.59■■■□□ 2.65
VEGFA-220ENST00000519767 CEP126Q9P2H0 1117 aa31.59■■■□□ 2.65
VEGFA-220ENST00000519767 CCDC85CA6NKD9 419 aa31.58■■■□□ 2.65
VEGFA-220ENST00000519767 IREB2P48200 963 aaKnown RBP31.58■■■□□ 2.65
VEGFA-220ENST00000519767 INHBEP58166 350 aa31.58■■■□□ 2.65
VEGFA-220ENST00000519767 NBPF12Q5TAG4 269 aaPredicted RBP31.58■■■□□ 2.65
VEGFA-220ENST00000519767 INTS3Q68E01 1043 aaKnown RBP31.58■■■□□ 2.65
VEGFA-220ENST00000519767 TNNI2P48788 182 aa31.57■■■□□ 2.64
VEGFA-220ENST00000519767 TEKT1Q969V4 418 aa31.57■■■□□ 2.64
VEGFA-220ENST00000519767 LRRFIP2Q9Y608 721 aaKnown RBP31.57■■■□□ 2.64
VEGFA-220ENST00000519767 AKAP11Q9UKA4 1901 aa31.57■■■□□ 2.64
VEGFA-220ENST00000519767 GNAI3P08754 354 aa31.56■■■□□ 2.64
VEGFA-220ENST00000519767 MKRN3Q13064 507 aaKnown RBP31.56■■■□□ 2.64
VEGFA-220ENST00000519767 MAST3O60307 1309 aa31.55■■■□□ 2.64
VEGFA-220ENST00000519767 ZBTB48P10074 688 aaPredicted RBP31.55■■■□□ 2.64
VEGFA-220ENST00000519767 IL15P40933 162 aaPredicted RBP31.55■■■□□ 2.64
VEGFA-220ENST00000519767 GRIK5Q16478 980 aa31.55■■■□□ 2.64
VEGFA-220ENST00000519767 WDR66Q8TBY9 1149 aa31.55■■■□□ 2.64
VEGFA-220ENST00000519767 FZD1Q9UP38 647 aa31.55■■■□□ 2.64
VEGFA-220ENST00000519767 USP2O75604 605 aaPredicted RBP31.54■■■□□ 2.64
VEGFA-220ENST00000519767 SIL1Q9H173 461 aa31.54■■■□□ 2.64
VEGFA-220ENST00000519767 GNL3LQ9NVN8 582 aaKnown RBP31.54■■■□□ 2.64
VEGFA-220ENST00000519767 MANSC4A6NHS7 340 aaPredicted RBP31.53■■■□□ 2.64
VEGFA-220ENST00000519767 ALDH1A1P00352 501 aa31.53■■■□□ 2.64
VEGFA-220ENST00000519767 NOM1Q5C9Z4 860 aaKnown RBP31.53■■■□□ 2.64
VEGFA-220ENST00000519767 ZDHHC15Q96MV8 337 aa31.53■■■□□ 2.64
VEGFA-220ENST00000519767 COPRSQ9NQ92 184 aa31.53■■■□□ 2.64
VEGFA-220ENST00000519767 ATP2B3Q16720 1220 aa31.52■■■□□ 2.64
VEGFA-220ENST00000519767 ANKRD13AQ8IZ07 590 aa31.52■■■□□ 2.64
VEGFA-220ENST00000519767 MEIS3Q99687 375 aa31.52■■■□□ 2.64
VEGFA-220ENST00000519767 TCP10L2B9ZVM9 353 aa31.51■■■□□ 2.63
VEGFA-220ENST00000519767 TBC1D8O95759 1140 aa31.51■■■□□ 2.63
VEGFA-220ENST00000519767 HHIPL2Q6UWX4 724 aa31.51■■■□□ 2.63
VEGFA-220ENST00000519767 CTU1Q7Z7A3 348 aaKnown RBP31.51■■■□□ 2.63
VEGFA-220ENST00000519767 CFHR5Q9BXR6 569 aa31.51■■■□□ 2.63
VEGFA-220ENST00000519767 ECM29Q5VYK3 1845 aa31.51■■■□□ 2.63
VEGFA-220ENST00000519767 SSC5DA1L4H1 1573 aa31.51■■■□□ 2.63
VEGFA-220ENST00000519767 FKBP1CQ5VVH2 108 aa31.5■■■□□ 2.63
VEGFA-220ENST00000519767 WNK4Q96J92 1243 aa31.5■■■□□ 2.63
VEGFA-220ENST00000519767 CLMNQ96JQ2 1002 aa31.5■■■□□ 2.63
VEGFA-220ENST00000519767 TEPSINQ96N21 525 aa31.5■■■□□ 2.63
VEGFA-220ENST00000519767 TMOD2Q9NZR1 351 aa31.49■■■□□ 2.63
VEGFA-220ENST00000519767 ATF7IPQ6VMQ6 1270 aa31.48■■■□□ 2.63
VEGFA-220ENST00000519767 SEMA3EO15041 775 aa31.47■■■□□ 2.63
VEGFA-220ENST00000519767 APOBEC3HQ6NTF7 200 aaKnown RBP31.47■■■□□ 2.63
VEGFA-220ENST00000519767 TMEM39BQ9GZU3 492 aa31.47■■■□□ 2.63
VEGFA-220ENST00000519767 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.47■■■□□ 2.63
VEGFA-220ENST00000519767 GPR25O00155 361 aa31.46■■■□□ 2.63
VEGFA-220ENST00000519767 ZBTB22O15209 634 aa31.46■■■□□ 2.63
VEGFA-220ENST00000519767 RGS19P49795 217 aa31.46■■■□□ 2.63
VEGFA-220ENST00000519767 MTX1Q13505 466 aa31.46■■■□□ 2.63
VEGFA-220ENST00000519767 PKN2Q16513 984 aaKnown RBP31.46■■■□□ 2.63
VEGFA-220ENST00000519767 FAM83AQ86UY5 434 aa31.46■■■□□ 2.63
VEGFA-220ENST00000519767 ZNF296Q8WUU4 475 aaPredicted RBP31.46■■■□□ 2.63
VEGFA-220ENST00000519767 HOOK2Q96ED9 719 aa31.46■■■□□ 2.63
VEGFA-220ENST00000519767 PA2G4Q9UQ80 394 aaKnown RBP31.46■■■□□ 2.63
VEGFA-220ENST00000519767 TRIM27P14373 513 aa31.45■■■□□ 2.63
VEGFA-220ENST00000519767 IFNL1Q8IU54 200 aa31.45■■■□□ 2.63
VEGFA-220ENST00000519767 FRAT1Q92837 279 aaPredicted RBP31.45■■■□□ 2.63
VEGFA-220ENST00000519767 DENND2AQ9ULE3 1009 aa31.45■■■□□ 2.63
VEGFA-220ENST00000519767 SRGAP3O43295 1099 aa31.44■■■□□ 2.62
VEGFA-220ENST00000519767 BCAR3O75815 825 aa31.44■■■□□ 2.62
VEGFA-220ENST00000519767 DIEXFQ68CQ4 756 aaKnown RBP31.44■■■□□ 2.62
VEGFA-220ENST00000519767 OTUD7BQ6GQQ9 843 aa31.44■■■□□ 2.62
VEGFA-220ENST00000519767 MIER1Q8N108 512 aa31.44■■■□□ 2.62
VEGFA-220ENST00000519767 MAP3K9P80192 1104 aa31.43■■■□□ 2.62
VEGFA-220ENST00000519767 AKAP2Q9Y2D5 859 aa31.43■■■□□ 2.62
VEGFA-220ENST00000519767 ARAP2Q8WZ64 1704 aa31.42■■■□□ 2.62
VEGFA-220ENST00000519767 FKTNO75072 461 aa31.41■■■□□ 2.62
VEGFA-220ENST00000519767 GNAI2P04899 355 aa31.41■■■□□ 2.62
VEGFA-220ENST00000519767 CACNB3P54284 484 aa31.41■■■□□ 2.62
VEGFA-220ENST00000519767 SALL1Q9NSC2 1324 aa31.41■■■□□ 2.62
VEGFA-220ENST00000519767 LDHBP07195 334 aaKnown RBP31.4■■■□□ 2.62
VEGFA-220ENST00000519767 HNRNPUQ00839 825 aaKnown RBP eCLIP31.4■■■□□ 2.628e-7■□□□□ 10.9
VEGFA-220ENST00000519767 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.4■■■□□ 2.62
VEGFA-220ENST00000519767 CDAN1Q8IWY9 1227 aa31.4■■■□□ 2.62
VEGFA-220ENST00000519767 ELP3Q9H9T3 547 aa31.4■■■□□ 2.62
VEGFA-220ENST00000519767 PHKA1P46020 1223 aa31.39■■■□□ 2.62
VEGFA-220ENST00000519767 ZGPATQ8N5A5 531 aaKnown RBP31.39■■■□□ 2.62
VEGFA-220ENST00000519767 CSADQ9Y600 493 aa31.39■■■□□ 2.62
VEGFA-220ENST00000519767 TESPA1A2RU30 521 aaPredicted RBP31.38■■■□□ 2.61
VEGFA-220ENST00000519767 GJA5P36382 358 aa31.38■■■□□ 2.61
VEGFA-220ENST00000519767 TIMM10P62072 90 aa31.38■■■□□ 2.61
VEGFA-220ENST00000519767 ZKSCAN2Q63HK3 967 aa31.38■■■□□ 2.61
VEGFA-220ENST00000519767 CCDC102BQ68D86 513 aa31.38■■■□□ 2.61
VEGFA-220ENST00000519767 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.38■■■□□ 2.611e-6■□□□□ 11.1
VEGFA-220ENST00000519767 OPTNQ96CV9 577 aa31.38■■■□□ 2.61
VEGFA-220ENST00000519767 MLLT1Q03111 559 aaPredicted RBP31.37■■■□□ 2.61
VEGFA-220ENST00000519767 CLUAP1Q96AJ1 413 aa31.37■■■□□ 2.61
VEGFA-220ENST00000519767 R3HDMLQ9H3Y0 253 aa31.37■■■□□ 2.61
VEGFA-220ENST00000519767 IGF2BP3O00425 579 aaKnown RBP eCLIP31.36■■■□□ 2.61
VEGFA-220ENST00000519767 PRDX5P30044 214 aa31.36■■■□□ 2.61
VEGFA-220ENST00000519767 DAGLAQ9Y4D2 1042 aa31.36■■■□□ 2.61
VEGFA-220ENST00000519767 ADORA1P30542 326 aa31.35■■■□□ 2.61
VEGFA-220ENST00000519767 TFCP2Q12800 502 aa31.35■■■□□ 2.61
VEGFA-220ENST00000519767 VGLL4Q14135 290 aa31.35■■■□□ 2.61
VEGFA-220ENST00000519767 DCAF15Q66K64 600 aa31.35■■■□□ 2.61
VEGFA-220ENST00000519767 FAM151AQ8WW52 585 aa31.35■■■□□ 2.61
VEGFA-220ENST00000519767 PDS5AQ29RF7 1337 aaKnown RBP31.34■■■□□ 2.61
VEGFA-220ENST00000519767 A0A1B0GUL7 405 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms