RNA–Protein interactions for RNA: ENST00000518607.1

EFCAB2-214, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-214ENST00000518607 PPP1R12BO60237 982 aaPredicted RBP27.59■■■□□ 2.01
EFCAB2-214ENST00000518607 IL15P40933 162 aaPredicted RBP27.59■■■□□ 2.01
EFCAB2-214ENST00000518607 HDLBPQ00341 1268 aaKnown RBP27.59■■■□□ 2.01
EFCAB2-214ENST00000518607 ATP2B3Q16720 1220 aa27.59■■■□□ 2.01
EFCAB2-214ENST00000518607 SUPT20HL1Q3ZLR7 823 aa27.59■■■□□ 2.01
EFCAB2-214ENST00000518607 DZIP1LQ8IYY4 767 aaKnown RBP27.59■■■□□ 2.01
EFCAB2-214ENST00000518607 COPRSQ9NQ92 184 aa27.59■■■□□ 2.01
EFCAB2-214ENST00000518607 ZNF70Q9UC06 446 aaPredicted RBP27.59■■■□□ 2.01
EFCAB2-214ENST00000518607 SUGT1Q9Y2Z0 365 aa27.59■■■□□ 2.01
EFCAB2-214ENST00000518607 MAP3K11Q16584 847 aa27.58■■■□□ 2.01
EFCAB2-214ENST00000518607 LDLRAD1Q5T700 205 aa27.58■■■□□ 2.01
EFCAB2-214ENST00000518607 TEKT1Q969V4 418 aa27.58■■■□□ 2.01
EFCAB2-214ENST00000518607 TRPA1O75762 1119 aa27.57■■■□□ 2
EFCAB2-214ENST00000518607 RASA3Q14644 834 aa27.57■■■□□ 2
EFCAB2-214ENST00000518607 GRIK5Q16478 980 aa27.57■■■□□ 2
EFCAB2-214ENST00000518607 TDRD3Q9H7E2 651 aaKnown RBP27.57■■■□□ 2
EFCAB2-214ENST00000518607 PA2G4Q9UQ80 394 aaKnown RBP27.57■■■□□ 2
EFCAB2-214ENST00000518607 MTX1Q13505 466 aa27.56■■■□□ 2
EFCAB2-214ENST00000518607 WDR66Q8TBY9 1149 aa27.56■■■□□ 2
EFCAB2-214ENST00000518607 SRGAP3O43295 1099 aa27.55■■■□□ 2
EFCAB2-214ENST00000518607 ABHD8Q96I13 439 aa27.55■■■□□ 2
EFCAB2-214ENST00000518607 GNL3LQ9NVN8 582 aaKnown RBP27.55■■■□□ 2
EFCAB2-214ENST00000518607 LAMB1P07942 1786 aa27.55■■■□□ 2
EFCAB2-214ENST00000518607 TNNI2P48788 182 aa27.54■■■□□ 2
EFCAB2-214ENST00000518607 SREBF2Q12772 1141 aa27.54■■■□□ 2
EFCAB2-214ENST00000518607 NBPF12Q5TAG4 269 aaPredicted RBP27.54■■■□□ 2
EFCAB2-214ENST00000518607 ZKSCAN2Q63HK3 967 aa27.54■■■□□ 2
EFCAB2-214ENST00000518607 CLUAP1Q96AJ1 413 aa27.54■■■□□ 2
EFCAB2-214ENST00000518607 OTOFQ9HC10 1997 aa27.54■■■□□ 2
EFCAB2-214ENST00000518607 FZD1Q9UP38 647 aa27.54■■■□□ 2
EFCAB2-214ENST00000518607 ZBED9Q6R2W3 1325 aa27.53■■■□□ 2
EFCAB2-214ENST00000518607 UNCXA6NJT0 531 aa27.53■■■□□ 2
EFCAB2-214ENST00000518607 IREB2P48200 963 aaKnown RBP27.53■■■□□ 2
EFCAB2-214ENST00000518607 MKRN3Q13064 507 aaKnown RBP27.53■■■□□ 2
EFCAB2-214ENST00000518607 ZDHHC15Q96MV8 337 aa27.53■■■□□ 2
EFCAB2-214ENST00000518607 MRIQ9BWK5 157 aa27.53■■■□□ 2
EFCAB2-214ENST00000518607 TNNQ9UQP3 1299 aa27.53■■■□□ 2
EFCAB2-214ENST00000518607 GNAI2P04899 355 aa27.52■■■□□ 2
EFCAB2-214ENST00000518607 TCP10L2B9ZVM9 353 aa27.51■■□□□ 1.99
EFCAB2-214ENST00000518607 SEMA3EO15041 775 aa27.51■■□□□ 1.99
EFCAB2-214ENST00000518607 SPRYD7Q5W111 196 aa27.51■■□□□ 1.99
EFCAB2-214ENST00000518607 TMOD2Q9NZR1 351 aa27.51■■□□□ 1.99
EFCAB2-214ENST00000518607 TM4SF4P48230 202 aa27.5■■□□□ 1.99
EFCAB2-214ENST00000518607 SLC10A4Q96EP9 437 aa27.5■■□□□ 1.99
EFCAB2-214ENST00000518607 ZBTB48P10074 688 aaPredicted RBP27.49■■□□□ 1.99
EFCAB2-214ENST00000518607 HHIPL2Q6UWX4 724 aa27.49■■□□□ 1.99
EFCAB2-214ENST00000518607 DENND2AQ9ULE3 1009 aa27.49■■□□□ 1.99
EFCAB2-214ENST00000518607 SALL1Q9NSC2 1324 aa27.48■■□□□ 1.99
EFCAB2-214ENST00000518607 ZBTB22O15209 634 aa27.48■■□□□ 1.99
EFCAB2-214ENST00000518607 PHKA1P46020 1223 aa27.48■■□□□ 1.99
EFCAB2-214ENST00000518607 ANKRD13AQ8IZ07 590 aa27.48■■□□□ 1.99
EFCAB2-214ENST00000518607 TMEM57Q8N5G2 664 aa27.48■■□□□ 1.99
EFCAB2-214ENST00000518607 CLMNQ96JQ2 1002 aa27.48■■□□□ 1.99
EFCAB2-214ENST00000518607 TEPSINQ96N21 525 aa27.48■■□□□ 1.99
EFCAB2-214ENST00000518607 MCOLN1Q9GZU1 580 aa27.48■■□□□ 1.99
EFCAB2-214ENST00000518607 AKAP2Q9Y2D5 859 aa27.48■■□□□ 1.99
EFCAB2-214ENST00000518607 USP2O75604 605 aaPredicted RBP27.47■■□□□ 1.99
EFCAB2-214ENST00000518607 DGKZQ13574 1117 aa27.47■■□□□ 1.99
EFCAB2-214ENST00000518607 FTSJ3Q8IY81 847 aaKnown RBP27.47■■□□□ 1.99
EFCAB2-214ENST00000518607 WNK4Q96J92 1243 aa27.47■■□□□ 1.99
EFCAB2-214ENST00000518607 TMEM39BQ9GZU3 492 aa27.47■■□□□ 1.99
EFCAB2-214ENST00000518607 ADORA1P30542 326 aa27.46■■□□□ 1.99
EFCAB2-214ENST00000518607 APOBEC3HQ6NTF7 200 aaKnown RBP27.46■■□□□ 1.99
EFCAB2-214ENST00000518607 MANSC4A6NHS7 340 aaPredicted RBP27.45■■□□□ 1.98
EFCAB2-214ENST00000518607 PRDX5P30044 214 aa27.45■■□□□ 1.98
EFCAB2-214ENST00000518607 CACNB3P54284 484 aa27.45■■□□□ 1.98
EFCAB2-214ENST00000518607 FKBP1CQ5VVH2 108 aa27.45■■□□□ 1.98
EFCAB2-214ENST00000518607 CCDC102BQ68D86 513 aa27.45■■□□□ 1.98
EFCAB2-214ENST00000518607 FAM83AQ86UY5 434 aa27.45■■□□□ 1.98
EFCAB2-214ENST00000518607 CDAN1Q8IWY9 1227 aa27.45■■□□□ 1.98
EFCAB2-214ENST00000518607 RPAP1Q9BWH6 1393 aaPredicted RBP27.45■■□□□ 1.98
EFCAB2-214ENST00000518607 PDS5AQ29RF7 1337 aaKnown RBP27.44■■□□□ 1.98
EFCAB2-214ENST00000518607 A0A1B0GUL7 405 aa27.44■■□□□ 1.98
EFCAB2-214ENST00000518607 LDHBP07195 334 aaKnown RBP27.44■■□□□ 1.98
EFCAB2-214ENST00000518607 TFCP2Q12800 502 aa27.44■■□□□ 1.98
EFCAB2-214ENST00000518607 ZGPATQ8N5A5 531 aaKnown RBP27.44■■□□□ 1.98
EFCAB2-214ENST00000518607 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.44■■□□□ 1.98
EFCAB2-214ENST00000518607 MVPQ14764 893 aaKnown RBP27.43■■□□□ 1.98
EFCAB2-214ENST00000518607 PNMA6EA0A0J9YXQ4 647 aa27.42■■□□□ 1.98
EFCAB2-214ENST00000518607 ALDH1A1P00352 501 aa27.42■■□□□ 1.98
EFCAB2-214ENST00000518607 INHBEP58166 350 aa27.42■■□□□ 1.98
EFCAB2-214ENST00000518607 TIMM10P62072 90 aa27.42■■□□□ 1.98
EFCAB2-214ENST00000518607 HOOK2Q96ED9 719 aa27.42■■□□□ 1.98
EFCAB2-214ENST00000518607 CFHR5Q9BXR6 569 aa27.42■■□□□ 1.98
EFCAB2-214ENST00000518607 DAGLAQ9Y4D2 1042 aa27.42■■□□□ 1.98
EFCAB2-214ENST00000518607 MYH2Q9UKX2 1941 aa27.41■■□□□ 1.98
EFCAB2-214ENST00000518607 TBC1D8O95759 1140 aa27.41■■□□□ 1.98
EFCAB2-214ENST00000518607 RASGRF1Q13972 1273 aa27.41■■□□□ 1.98
EFCAB2-214ENST00000518607 DIXDC1Q155Q3 683 aa27.41■■□□□ 1.98
EFCAB2-214ENST00000518607 NOM1Q5C9Z4 860 aaKnown RBP27.41■■□□□ 1.98
EFCAB2-214ENST00000518607 XAGE2Q96GT9 111 aa27.41■■□□□ 1.98
EFCAB2-214ENST00000518607 ITPRIPQ8IWB1 547 aa27.4■■□□□ 1.98
EFCAB2-214ENST00000518607 CCDC85CA6NKD9 419 aa27.39■■□□□ 1.98
EFCAB2-214ENST00000518607 G3BP1Q13283 466 aaKnown RBP eCLIP27.39■■□□□ 1.98
EFCAB2-214ENST00000518607 CTU1Q7Z7A3 348 aaKnown RBP27.39■■□□□ 1.98
EFCAB2-214ENST00000518607 IFNL1Q8IU54 200 aa27.39■■□□□ 1.98
EFCAB2-214ENST00000518607 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.39■■□□□ 1.98
EFCAB2-214ENST00000518607 ELP3Q9H9T3 547 aa27.39■■□□□ 1.98
EFCAB2-214ENST00000518607 CSADQ9Y600 493 aa27.39■■□□□ 1.98
EFCAB2-214ENST00000518607 AK9Q5TCS8 1911 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms