RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 PTPN22Q9Y2R2 807 aa21.27■■□□□ 1
TNPO1-211ENST00000518279 HIBADHP31937 336 aaKnown RBP21.26■□□□□ 0.99
TNPO1-211ENST00000518279 SLFN5Q08AF3 891 aa21.26■□□□□ 0.99
TNPO1-211ENST00000518279 UBE4AQ14139 1066 aa21.26■□□□□ 0.99
TNPO1-211ENST00000518279 GRIK5Q16478 980 aa21.26■□□□□ 0.99
TNPO1-211ENST00000518279 CNKSR2Q8WXI2 1034 aa21.26■□□□□ 0.99
TNPO1-211ENST00000518279 ERO1AQ96HE7 468 aa21.26■□□□□ 0.99
TNPO1-211ENST00000518279 SUCLG2Q96I99 432 aa21.26■□□□□ 0.99
TNPO1-211ENST00000518279 C9orf78Q9NZ63 289 aaPredicted RBP21.26■□□□□ 0.99
TNPO1-211ENST00000518279 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.25■□□□□ 0.99
TNPO1-211ENST00000518279 DZIP1LQ8IYY4 767 aaKnown RBP21.25■□□□□ 0.99
TNPO1-211ENST00000518279 ARAP2Q8WZ64 1704 aa21.25■□□□□ 0.99
TNPO1-211ENST00000518279 OPTNQ96CV9 577 aa21.25■□□□□ 0.99
TNPO1-211ENST00000518279 MS4A4AQ96JQ5 239 aa21.25■□□□□ 0.99
TNPO1-211ENST00000518279 TCP10L2B9ZVM9 353 aa21.24■□□□□ 0.99
TNPO1-211ENST00000518279 ALDH1L1O75891 902 aa21.24■□□□□ 0.99
TNPO1-211ENST00000518279 TNFAIP1Q13829 316 aa21.24■□□□□ 0.99
TNPO1-211ENST00000518279 OTUD7BQ6GQQ9 843 aa21.24■□□□□ 0.99
TNPO1-211ENST00000518279 SLC4A10Q6U841 1118 aa21.24■□□□□ 0.99
TNPO1-211ENST00000518279 TMEM39BQ9GZU3 492 aa21.24■□□□□ 0.99
TNPO1-211ENST00000518279 CRKP46108 304 aa21.23■□□□□ 0.99
TNPO1-211ENST00000518279 SP3Q02447 781 aa21.23■□□□□ 0.99
TNPO1-211ENST00000518279 INTS3Q68E01 1043 aaKnown RBP21.23■□□□□ 0.99
TNPO1-211ENST00000518279 MRPL50Q8N5N7 158 aaKnown RBP21.23■□□□□ 0.99
TNPO1-211ENST00000518279 CDCA7LQ96GN5 454 aa21.23■□□□□ 0.99
TNPO1-211ENST00000518279 EFCC1Q9HA90 598 aa21.23■□□□□ 0.99
TNPO1-211ENST00000518279 RIPOR2Q9Y4F9 1068 aa21.23■□□□□ 0.99
TNPO1-211ENST00000518279 NBPF7P0C2Y1 421 aaPredicted RBP21.22■□□□□ 0.99
TNPO1-211ENST00000518279 BRI3BPQ8WY22 251 aa21.22■□□□□ 0.99
TNPO1-211ENST00000518279 SRCIN1Q9C0H9 1055 aa21.22■□□□□ 0.99
TNPO1-211ENST00000518279 IQSEC3Q9UPP2 1182 aaPredicted RBP21.22■□□□□ 0.99
TNPO1-211ENST00000518279 RBBP6Q7Z6E9 1792 aaKnown RBP21.21■□□□□ 0.99
TNPO1-211ENST00000518279 VGLL4Q14135 290 aa21.21■□□□□ 0.99
TNPO1-211ENST00000518279 TRMT2AQ8IZ69 625 aaKnown RBP21.21■□□□□ 0.99
TNPO1-211ENST00000518279 ARMC5Q96C12 935 aa21.21■□□□□ 0.99
TNPO1-211ENST00000518279 FBXO33Q7Z6M2 555 aa21.2■□□□□ 0.98
TNPO1-211ENST00000518279 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.2■□□□□ 0.98
TNPO1-211ENST00000518279 EN2P19622 333 aaPredicted RBP21.19■□□□□ 0.98
TNPO1-211ENST00000518279 CACNB3P54284 484 aa21.19■□□□□ 0.98
TNPO1-211ENST00000518279 MAP3K9P80192 1104 aa21.19■□□□□ 0.98
TNPO1-211ENST00000518279 LRRC24Q50LG9 513 aa21.19■□□□□ 0.98
TNPO1-211ENST00000518279 SSH1Q8WYL5 1049 aa21.19■□□□□ 0.98
TNPO1-211ENST00000518279 BICC1Q9H694 974 aaKnown RBP21.19■□□□□ 0.98
TNPO1-211ENST00000518279 UTYO14607 1347 aa21.19■□□□□ 0.98
TNPO1-211ENST00000518279 MROH5Q6ZUA9 1318 aa21.19■□□□□ 0.98
TNPO1-211ENST00000518279 CCL15-CCL14A0A0B4J2E2 113 aa21.18■□□□□ 0.98
TNPO1-211ENST00000518279 CHAF1AQ13111 956 aaPredicted RBP21.18■□□□□ 0.98
TNPO1-211ENST00000518279 CCL15Q16663 113 aa21.18■□□□□ 0.98
TNPO1-211ENST00000518279 FAM43AQ8N2R8 423 aa21.18■□□□□ 0.98
TNPO1-211ENST00000518279 OTUD5Q96G74 571 aa21.18■□□□□ 0.98
TNPO1-211ENST00000518279 TNNI2P48788 182 aa21.17■□□□□ 0.98
TNPO1-211ENST00000518279 GTF2A2P52657 109 aa21.17■□□□□ 0.98
TNPO1-211ENST00000518279 TAF1CQ15572 869 aaPredicted RBP21.17■□□□□ 0.98
TNPO1-211ENST00000518279 RABL6Q3YEC7 729 aaPredicted RBP21.17■□□□□ 0.98
TNPO1-211ENST00000518279 ANKRD44Q8N8A2 993 aa21.17■□□□□ 0.98
TNPO1-211ENST00000518279 PTPRCP08575 1304 aa21.16■□□□□ 0.98
TNPO1-211ENST00000518279 VPS37DQ86XT2 251 aa21.16■□□□□ 0.98
TNPO1-211ENST00000518279 VGLL2Q8N8G2 317 aa21.16■□□□□ 0.98
TNPO1-211ENST00000518279 CEP290O15078 2479 aa21.15■□□□□ 0.98
TNPO1-211ENST00000518279 METTL24Q5JXM2 366 aa21.15■□□□□ 0.98
TNPO1-211ENST00000518279 GCC1Q96CN9 775 aa21.15■□□□□ 0.98
TNPO1-211ENST00000518279 ZNF333Q96JL9 665 aa21.15■□□□□ 0.98
TNPO1-211ENST00000518279 ZFYVE28Q9HCC9 887 aa21.15■□□□□ 0.98
TNPO1-211ENST00000518279 CSADQ9Y600 493 aa21.15■□□□□ 0.98
TNPO1-211ENST00000518279 PTCH2Q9Y6C5 1203 aa21.15■□□□□ 0.98
TNPO1-211ENST00000518279 SNCAIPQ9Y6H5 919 aa21.15■□□□□ 0.98
TNPO1-211ENST00000518279 BCAMP50895 628 aa21.14■□□□□ 0.97
TNPO1-211ENST00000518279 HDLBPQ00341 1268 aaKnown RBP21.14■□□□□ 0.97
TNPO1-211ENST00000518279 ALDH1L2Q3SY69 923 aa21.14■□□□□ 0.97
TNPO1-211ENST00000518279 HABP4Q5JVS0 413 aaKnown RBP21.14■□□□□ 0.97
TNPO1-211ENST00000518279 KLHDC4Q8TBB5 520 aa21.14■□□□□ 0.97
TNPO1-211ENST00000518279 ZKSCAN4Q969J2 545 aaPredicted RBP21.14■□□□□ 0.97
TNPO1-211ENST00000518279 TEKT1Q969V4 418 aa21.14■□□□□ 0.97
TNPO1-211ENST00000518279 ZSWIM8A7E2V4 1837 aa21.13■□□□□ 0.97
TNPO1-211ENST00000518279 SPDYE5A6NIY4 337 aa21.13■□□□□ 0.97
TNPO1-211ENST00000518279 FRAT2O75474 233 aaPredicted RBP21.13■□□□□ 0.97
TNPO1-211ENST00000518279 PDE8BO95263 885 aa21.13■□□□□ 0.97
TNPO1-211ENST00000518279 CAVIN4Q5BKX8 364 aa21.13■□□□□ 0.97
TNPO1-211ENST00000518279 APOBEC3HQ6NTF7 200 aaKnown RBP21.13■□□□□ 0.97
TNPO1-211ENST00000518279 TBC1D22AQ8WUA7 517 aa21.13■□□□□ 0.97
TNPO1-211ENST00000518279 ZDHHC15Q96MV8 337 aa21.12■□□□□ 0.97
TNPO1-211ENST00000518279 WRNIP1Q96S55 665 aa21.12■□□□□ 0.97
TNPO1-211ENST00000518279 ARHGAP39Q9C0H5 1083 aa21.12■□□□□ 0.97
TNPO1-211ENST00000518279 BTBD19C9JJ37 291 aa21.11■□□□□ 0.97
TNPO1-211ENST00000518279 SLC9C1Q4G0N8 1177 aa21.11■□□□□ 0.97
TNPO1-211ENST00000518279 ERO1BQ86YB8 467 aa21.11■□□□□ 0.97
TNPO1-211ENST00000518279 MRIQ9BWK5 157 aa21.11■□□□□ 0.97
TNPO1-211ENST00000518279 IRF6O14896 467 aa21.1■□□□□ 0.97
TNPO1-211ENST00000518279 CT47B1P0C2W7 299 aaPredicted RBP21.1■□□□□ 0.97
TNPO1-211ENST00000518279 CETPP11597 493 aa21.1■□□□□ 0.97
TNPO1-211ENST00000518279 FAM83AQ86UY5 434 aa21.1■□□□□ 0.97
TNPO1-211ENST00000518279 TMEM106CQ9BVX2 250 aa21.1■□□□□ 0.97
TNPO1-211ENST00000518279 SMC4Q9NTJ3 1288 aa21.1■□□□□ 0.97
TNPO1-211ENST00000518279 TLR2O60603 784 aa21.09■□□□□ 0.97
TNPO1-211ENST00000518279 MYCP01106 439 aaPredicted RBP21.09■□□□□ 0.97
TNPO1-211ENST00000518279 FGFR2P21802 821 aa21.09■□□□□ 0.97
TNPO1-211ENST00000518279 FKBP1CQ5VVH2 108 aa21.09■□□□□ 0.97
TNPO1-211ENST00000518279 SZT2Q5T011 3432 aa21.09■□□□□ 0.97
TNPO1-211ENST00000518279 RANBP2P49792 3224 aaKnown RBP21.08■□□□□ 0.97
TNPO1-211ENST00000518279 LACTBP83111 547 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms