RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 DDX41Q9UJV9 622 aaKnown RBP3.11□□□□□ -1.91
RNU6-1041P-201ENST00000516254 SYNGAP1Q96PV0 1343 aa3.11□□□□□ -1.91
RNU6-1041P-201ENST00000516254 SOX1O00570 391 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 ENC1O14682 589 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 ARHGEF15O94989 841 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 EPHA1P21709 976 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 GBP2P32456 591 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 LIG3P49916 1009 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 LMNB2Q03252 620 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 TRIM28Q13263 835 aaKnown RBP3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 COL9A2Q14055 689 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 ZNF423Q2M1K9 1284 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 PRRT3Q5FWE3 981 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 TRAPPC3LQ5T215 181 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 LCE2CQ5TA81 110 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 TTBK2Q6IQ55 1244 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 FBXO11Q86XK2 927 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 SULF2Q8IWU5 870 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 ZSCAN1Q8NBB4 408 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 SLC43A3Q8NBI5 491 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 SCARF2Q96GP6 870 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 CORO1BQ9BR76 489 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 KCNQ5Q9NR82 932 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 SH2B1Q9NRF2 756 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 KRT82Q9NSB4 513 aa3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.1□□□□□ -1.91
RNU6-1041P-201ENST00000516254 LINC01387J3KSC0 135 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 TRIM37O94972 964 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 ELNP15502 786 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 CD68P34810 354 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 EIF4A3P38919 411 aaKnown RBP3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 GSTM4Q03013 218 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 FAAP100Q0VG06 881 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 COL9A3Q14050 684 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 SETDB1Q15047 1291 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 POU4F3Q15319 338 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 SF3A1Q15459 793 aaKnown RBP3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 PCNX4Q63HM2 1172 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 LLGL2Q6P1M3 1020 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 IGF2-ASQ6U949 168 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 LINC00114Q6XXX2 140 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 KIAA0825Q8IV33 1275 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 TRIM42Q8IWZ5 723 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 DMRTC2Q8IXT2 367 aaPredicted RBP3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 PHC3Q8NDX5 983 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 SLC7A3Q8WY07 619 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 NACC1Q96RE7 527 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 PLVAPQ9BX97 442 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 MIR1-1HGQ9H1L0 117 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 KBTBD4Q9NVX7 518 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 SUPT16HQ9Y5B9 1047 aaKnown RBP3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 TACC3Q9Y6A5 838 aa3.09□□□□□ -1.91
RNU6-1041P-201ENST00000516254 A0A0A0MRY4 1105 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 MEGF11A6BM72 1044 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 DLL1O00548 723 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 CELA3AP09093 270 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 GSTP1P09211 210 aaKnown RBP3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 SLFN14P0C7P3 912 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 SPATA31C1P0DKV0 1188 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 HOXB4P17483 251 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 BMP6P22004 513 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 NRG1Q02297 640 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 RAD51AP2Q09MP3 1159 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 ZNF252P-AS1Q0IIN9 211 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 CAMK2GQ13555 558 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 SNAP47Q5SQN1 464 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 FMR1NBQ8N0W7 255 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 TMEM130Q8N3G9 435 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 RASGRP4Q8TDF6 673 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 WHAMMQ8TF30 809 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 RHOVQ96L33 236 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 SPON2Q9BUD6 331 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 NT5C1AQ9BXI3 368 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 MRPL18Q9H0U6 180 aaKnown RBP3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 CBX8Q9HC52 389 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 CACNA2D2Q9NY47 1150 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 INPP5FQ9Y2H2 1132 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 SNCAIPQ9Y6H5 919 aa3.08□□□□□ -1.92
RNU6-1041P-201ENST00000516254 MINDY4BA8MYZ0 360 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 RNF225M0QZC1 329 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 GREM1O60565 184 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 FBXO24O75426 580 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 BPNT1O95861 308 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 TFE3P19532 575 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 GJA8P48165 433 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 RACK1P63244 317 aaKnown RBP3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 MPP2Q14168 576 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 DUOXA2Q1HG44 320 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 NAALADL2Q58DX5 795 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 EXOSC6Q5RKV6 272 aaKnown RBP3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 C9orf131Q5VYM1 1079 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 C8orf86Q6ZUL3 223 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 PDZD3Q86UT5 571 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 ZNF296Q8WUU4 475 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 GATAD2BQ8WXI9 593 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 ARMC5Q96C12 935 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 KLHDC7BQ96G42 594 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 SEC16BQ96JE7 1060 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 GMLQ99445 158 aa3.07□□□□□ -1.92
RNU6-1041P-201ENST00000516254 LRRC3Q9BY71 257 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms