RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
PFDN1-203ENST00000510217 PPP2R3BQ9Y5P8 575 aa12.83□□□□□ -0.36
PFDN1-203ENST00000510217 UBE2Q2LH0YL09 131 aa12.82□□□□□ -0.36
PFDN1-203ENST00000510217 MYO1BO43795 1136 aa12.82□□□□□ -0.36
PFDN1-203ENST00000510217 GNAI3P08754 354 aa12.82□□□□□ -0.36
PFDN1-203ENST00000510217 NF2P35240 595 aa12.82□□□□□ -0.36
PFDN1-203ENST00000510217 RBM5P52756 815 aaKnown RBP eCLIP12.82□□□□□ -0.36
PFDN1-203ENST00000510217 KIF23Q02241 960 aaPredicted RBP12.82□□□□□ -0.36
PFDN1-203ENST00000510217 MTX1Q13505 466 aa12.82□□□□□ -0.36
PFDN1-203ENST00000510217 CLUAP1Q96AJ1 413 aa12.82□□□□□ -0.36
PFDN1-203ENST00000510217 COPRSQ9NQ92 184 aa12.82□□□□□ -0.36
PFDN1-203ENST00000510217 IL15P40933 162 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-203ENST00000510217 CRKP46108 304 aa12.81□□□□□ -0.36
PFDN1-203ENST00000510217 TTLL12Q14166 644 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-203ENST00000510217 ATP2B3Q16720 1220 aa12.81□□□□□ -0.36
PFDN1-203ENST00000510217 SPDYE2Q495Y8 402 aa12.81□□□□□ -0.36
PFDN1-203ENST00000510217 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
PFDN1-203ENST00000510217 ZKSCAN2Q63HK3 967 aa12.81□□□□□ -0.36
PFDN1-203ENST00000510217 TMEM57Q8N5G2 664 aa12.81□□□□□ -0.36
PFDN1-203ENST00000510217 TBC1D22AQ8WUA7 517 aa12.81□□□□□ -0.36
PFDN1-203ENST00000510217 VEZTQ9HBM0 779 aa12.81□□□□□ -0.36
PFDN1-203ENST00000510217 FZD1Q9UP38 647 aa12.81□□□□□ -0.36
PFDN1-203ENST00000510217 SRGAP3O43295 1099 aa12.8□□□□□ -0.36
PFDN1-203ENST00000510217 FRAT2O75474 233 aaPredicted RBP12.8□□□□□ -0.36
PFDN1-203ENST00000510217 PRKG1Q13976 671 aa12.8□□□□□ -0.36
PFDN1-203ENST00000510217 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
PFDN1-203ENST00000510217 TDRD3Q9H7E2 651 aaKnown RBP12.8□□□□□ -0.36
PFDN1-203ENST00000510217 SAGE1Q9NXZ1 904 aa12.8□□□□□ -0.36
PFDN1-203ENST00000510217 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
PFDN1-203ENST00000510217 ZNF70Q9UC06 446 aaPredicted RBP12.8□□□□□ -0.36
PFDN1-203ENST00000510217 CAPN15O75808 1086 aa12.79□□□□□ -0.36
PFDN1-203ENST00000510217 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
PFDN1-203ENST00000510217 MAP3K11Q16584 847 aa12.79□□□□□ -0.36
PFDN1-203ENST00000510217 LDLRAD1Q5T700 205 aa12.79□□□□□ -0.36
PFDN1-203ENST00000510217 ARMC9Q7Z3E5 817 aa12.79□□□□□ -0.36
PFDN1-203ENST00000510217 CSRNP1Q96S65 589 aa12.79□□□□□ -0.36
PFDN1-203ENST00000510217 ANGEL1Q9UNK9 670 aaKnown RBP12.79□□□□□ -0.36
PFDN1-203ENST00000510217 CASP8AP2Q9UKL3 1982 aa12.79□□□□□ -0.36
PFDN1-203ENST00000510217 PNMA6EA0A0J9YXQ4 647 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 GNAI2P04899 355 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 ADORA1P30542 326 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 PHKA1P46020 1223 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 TNFAIP1Q13829 316 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 RASA3Q14644 834 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 NBPF12Q5TAG4 269 aaPredicted RBP12.78□□□□□ -0.36
PFDN1-203ENST00000510217 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 TEKT1Q969V4 418 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 RNF186Q9NXI6 227 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 SUGT1Q9Y2Z0 365 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.78□□□□□ -0.36
PFDN1-203ENST00000510217 MAST3O60307 1309 aa12.78□□□□□ -0.36
PFDN1-203ENST00000510217 RLBP1P12271 317 aa12.77□□□□□ -0.37
PFDN1-203ENST00000510217 WDR66Q8TBY9 1149 aa12.77□□□□□ -0.37
PFDN1-203ENST00000510217 ZDHHC15Q96MV8 337 aa12.77□□□□□ -0.37
PFDN1-203ENST00000510217 TEPSINQ96N21 525 aa12.77□□□□□ -0.37
PFDN1-203ENST00000510217 TCP10L2B9ZVM9 353 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 TRPA1O75762 1119 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 PRDX5P30044 214 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 CACNB3P54284 484 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 TFCP2Q12800 502 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 MKRN3Q13064 507 aaKnown RBP12.76□□□□□ -0.37
PFDN1-203ENST00000510217 SUPT20HL1Q3ZLR7 823 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 CCDC102BQ68D86 513 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 APOBEC3HQ6NTF7 200 aaKnown RBP12.76□□□□□ -0.37
PFDN1-203ENST00000510217 FTSJ3Q8IY81 847 aaKnown RBP12.76□□□□□ -0.37
PFDN1-203ENST00000510217 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
PFDN1-203ENST00000510217 CLMNQ96JQ2 1002 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 MRIQ9BWK5 157 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 SALL1Q9NSC2 1324 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 RPAP1Q9BWH6 1393 aaPredicted RBP12.76□□□□□ -0.37
PFDN1-203ENST00000510217 MYH2Q9UKX2 1941 aa12.76□□□□□ -0.37
PFDN1-203ENST00000510217 A0A1B0GUL7 405 aa12.75□□□□□ -0.37
PFDN1-203ENST00000510217 SEMA3EO15041 775 aa12.75□□□□□ -0.37
PFDN1-203ENST00000510217 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
PFDN1-203ENST00000510217 SPRYD7Q5W111 196 aa12.75□□□□□ -0.37
PFDN1-203ENST00000510217 HHIPL2Q6UWX4 724 aa12.75□□□□□ -0.37
PFDN1-203ENST00000510217 GNL3LQ9NVN8 582 aaKnown RBP12.75□□□□□ -0.37
PFDN1-203ENST00000510217 DAGLAQ9Y4D2 1042 aa12.75□□□□□ -0.37
PFDN1-203ENST00000510217 DOCK2Q92608 1830 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 MAST2Q6P0Q8 1798 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 PDS5AQ29RF7 1337 aaKnown RBP12.74□□□□□ -0.37
PFDN1-203ENST00000510217 USP2O75604 605 aaPredicted RBP12.74□□□□□ -0.37
PFDN1-203ENST00000510217 TNNI2P48788 182 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 TIMM10P62072 90 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 RASGRF1Q13972 1273 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 POLA2Q14181 598 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 DIXDC1Q155Q3 683 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 ITPRIPQ8IWB1 547 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 XAGE2Q96GT9 111 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 ABHD8Q96I13 439 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 DENND2AQ9ULE3 1009 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 AKAP2Q9Y2D5 859 aa12.74□□□□□ -0.37
PFDN1-203ENST00000510217 RFX7Q2KHR2 1363 aa12.73□□□□□ -0.37
PFDN1-203ENST00000510217 UNCXA6NJT0 531 aa12.73□□□□□ -0.37
PFDN1-203ENST00000510217 GJA5P36382 358 aa12.73□□□□□ -0.37
PFDN1-203ENST00000510217 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
PFDN1-203ENST00000510217 TM4SF4P48230 202 aa12.73□□□□□ -0.37
PFDN1-203ENST00000510217 SREBF2Q12772 1141 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms