RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 CASP8AP2Q9UKL3 1982 aa12.59□□□□□ -0.39
UBE2D3-227ENST00000508818 COL1A1P02452 1464 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-227ENST00000508818 IPO8O15397 1037 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 CRKP46108 304 aa12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 IREB2P48200 963 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 TNNI2P48788 182 aa12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 LDLRAD1Q5T700 205 aa12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 SIL1Q9H173 461 aa12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 TDRD3Q9H7E2 651 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 CEP126Q9P2H0 1117 aa12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 ZNF70Q9UC06 446 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 AKAP11Q9UKA4 1901 aa12.58□□□□□ -0.4
UBE2D3-227ENST00000508818 A0A1B0GUL6 1792 aa12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 TM4SF4P48230 202 aa12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 RARSP54136 660 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 NBPF12Q5TAG4 269 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 VGLL2Q8N8G2 317 aa12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 LPIN2Q92539 896 aa12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 TEKT1Q969V4 418 aa12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 GNL3LQ9NVN8 582 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 TMOD2Q9NZR1 351 aa12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 FZD1Q9UP38 647 aa12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 LRRFIP2Q9Y608 721 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 ZNF646O15015 1829 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 KIF16BQ96L93 1317 aa12.57□□□□□ -0.4
UBE2D3-227ENST00000508818 UNCXA6NJT0 531 aa12.56□□□□□ -0.4
UBE2D3-227ENST00000508818 TCP10L2B9ZVM9 353 aa12.56□□□□□ -0.4
UBE2D3-227ENST00000508818 TBC1D8O95759 1140 aa12.56□□□□□ -0.4
UBE2D3-227ENST00000508818 GNAI3P08754 354 aa12.56□□□□□ -0.4
UBE2D3-227ENST00000508818 RFX5P48382 616 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-227ENST00000508818 INHBEP58166 350 aa12.56□□□□□ -0.4
UBE2D3-227ENST00000508818 HDLBPQ00341 1268 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-227ENST00000508818 SPRYD7Q5W111 196 aa12.56□□□□□ -0.4
UBE2D3-227ENST00000508818 ARHGAP45Q92619 1136 aa12.56□□□□□ -0.4
UBE2D3-227ENST00000508818 MAST3O60307 1309 aa12.56□□□□□ -0.4
UBE2D3-227ENST00000508818 MANSC4A6NHS7 340 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 CIAO1O76071 339 aa12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 ALDH1A1P00352 501 aa12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 FGFR2P21802 821 aa12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 IL15P40933 162 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 MAP3K11Q16584 847 aa12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 ATP2B3Q16720 1220 aa12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 ANKRD13AQ8IZ07 590 aa12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 WDR66Q8TBY9 1149 aa12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 FRAT1Q92837 279 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 SUGT1Q9Y2Z0 365 aa12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 AOX1Q06278 1338 aa12.55□□□□□ -0.4
UBE2D3-227ENST00000508818 USP2O75604 605 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-227ENST00000508818 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-227ENST00000508818 GRIK5Q16478 980 aa12.54□□□□□ -0.4
UBE2D3-227ENST00000508818 INTS3Q68E01 1043 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-227ENST00000508818 OTUD7BQ6GQQ9 843 aa12.54□□□□□ -0.4
UBE2D3-227ENST00000508818 ATG9AQ7Z3C6 839 aa12.54□□□□□ -0.4
UBE2D3-227ENST00000508818 CTU1Q7Z7A3 348 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-227ENST00000508818 WNK4Q96J92 1243 aa12.54□□□□□ -0.4
UBE2D3-227ENST00000508818 CLMNQ96JQ2 1002 aa12.54□□□□□ -0.4
UBE2D3-227ENST00000508818 MRIQ9BWK5 157 aa12.54□□□□□ -0.4
UBE2D3-227ENST00000508818 HOOK2Q96ED9 719 aa12.53□□□□□ -0.4
UBE2D3-227ENST00000508818 ZDHHC15Q96MV8 337 aa12.53□□□□□ -0.4
UBE2D3-227ENST00000508818 MEIS3Q99687 375 aa12.53□□□□□ -0.4
UBE2D3-227ENST00000508818 TMEM39BQ9GZU3 492 aa12.53□□□□□ -0.4
UBE2D3-227ENST00000508818 GPR25O00155 361 aa12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 SRGAP3O43295 1099 aa12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 CACNB3P54284 484 aa12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 MAP3K9P80192 1104 aa12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 DIEXFQ68CQ4 756 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 HHIPL2Q6UWX4 724 aa12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 ZNF296Q8WUU4 475 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 ELP3Q9H9T3 547 aa12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 DENND2AQ9ULE3 1009 aa12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 PA2G4Q9UQ80 394 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 CSADQ9Y600 493 aa12.52□□□□□ -0.41
UBE2D3-227ENST00000508818 ECM29Q5VYK3 1845 aa12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 FKTNO75072 461 aa12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 BCAR3O75815 825 aa12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 LDHBP07195 334 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 MLLT1Q03111 559 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 PKN2Q16513 984 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 ATF7IPQ6VMQ6 1270 aa12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 IFNL1Q8IU54 200 aa12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 MIER1Q8N108 512 aa12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 CLUAP1Q96AJ1 413 aa12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 AKAP2Q9Y2D5 859 aa12.51□□□□□ -0.41
UBE2D3-227ENST00000508818 SEMA3EO15041 775 aa12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 GNAI2P04899 355 aa12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 NOM1Q5C9Z4 860 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 FKBP1CQ5VVH2 108 aa12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 APOBEC3HQ6NTF7 200 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 FAM83AQ86UY5 434 aa12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 OPTNQ96CV9 577 aa12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 NEUROD6Q96NK8 337 aa12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 SSUH2Q9Y2M2 353 aa12.5□□□□□ -0.41
UBE2D3-227ENST00000508818 SSC5DA1L4H1 1573 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms