RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 C9orf78Q9NZ63 289 aaPredicted RBP17.53■□□□□ 0.4
TSPAN17-206ENST00000507471 TCP10L2B9ZVM9 353 aa17.52■□□□□ 0.4
TSPAN17-206ENST00000507471 CNKSR2Q8WXI2 1034 aa17.52■□□□□ 0.4
TSPAN17-206ENST00000507471 ARMC5Q96C12 935 aa17.52■□□□□ 0.4
TSPAN17-206ENST00000507471 TMEM39BQ9GZU3 492 aa17.52■□□□□ 0.4
TSPAN17-206ENST00000507471 MRS2Q9HD23 443 aa17.52■□□□□ 0.4
TSPAN17-206ENST00000507471 ALDH1L1O75891 902 aa17.51■□□□□ 0.39
TSPAN17-206ENST00000507471 CRKP46108 304 aa17.51■□□□□ 0.39
TSPAN17-206ENST00000507471 SLC4A10Q6U841 1118 aa17.51■□□□□ 0.39
TSPAN17-206ENST00000507471 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.51■□□□□ 0.39
TSPAN17-206ENST00000507471 BRI3BPQ8WY22 251 aa17.51■□□□□ 0.39
TSPAN17-206ENST00000507471 KAZALD1Q96I82 304 aa17.51■□□□□ 0.39
TSPAN17-206ENST00000507471 SUCLG2Q96I99 432 aa17.51■□□□□ 0.39
TSPAN17-206ENST00000507471 EN2P19622 333 aaPredicted RBP17.5■□□□□ 0.39
TSPAN17-206ENST00000507471 VGLL4Q14135 290 aa17.5■□□□□ 0.39
TSPAN17-206ENST00000507471 GRIK5Q16478 980 aa17.5■□□□□ 0.39
TSPAN17-206ENST00000507471 SRCIN1Q9C0H9 1055 aa17.5■□□□□ 0.39
TSPAN17-206ENST00000507471 CCL15-CCL14A0A0B4J2E2 113 aa17.49■□□□□ 0.39
TSPAN17-206ENST00000507471 TNNI2P48788 182 aa17.49■□□□□ 0.39
TSPAN17-206ENST00000507471 TAF1CQ15572 869 aaPredicted RBP17.49■□□□□ 0.39
TSPAN17-206ENST00000507471 CCL15Q16663 113 aa17.49■□□□□ 0.39
TSPAN17-206ENST00000507471 IQSEC3Q9UPP2 1182 aaPredicted RBP17.49■□□□□ 0.39
TSPAN17-206ENST00000507471 RIPOR2Q9Y4F9 1068 aa17.49■□□□□ 0.39
TSPAN17-206ENST00000507471 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
TSPAN17-206ENST00000507471 NBPF7P0C2Y1 421 aaPredicted RBP17.48■□□□□ 0.39
TSPAN17-206ENST00000507471 GTF2A2P52657 109 aa17.48■□□□□ 0.39
TSPAN17-206ENST00000507471 MAP3K9P80192 1104 aa17.48■□□□□ 0.39
TSPAN17-206ENST00000507471 HABP4Q5JVS0 413 aaKnown RBP17.48■□□□□ 0.39
TSPAN17-206ENST00000507471 FAM43AQ8N2R8 423 aa17.48■□□□□ 0.39
TSPAN17-206ENST00000507471 OTUD5Q96G74 571 aa17.48■□□□□ 0.39
TSPAN17-206ENST00000507471 ZFYVE28Q9HCC9 887 aa17.48■□□□□ 0.39
TSPAN17-206ENST00000507471 CSADQ9Y600 493 aa17.48■□□□□ 0.39
TSPAN17-206ENST00000507471 CENPFP49454 3210 aa17.47■□□□□ 0.39
TSPAN17-206ENST00000507471 CACNB3P54284 484 aa17.47■□□□□ 0.39
TSPAN17-206ENST00000507471 FBXO33Q7Z6M2 555 aa17.47■□□□□ 0.39
TSPAN17-206ENST00000507471 ZNF333Q96JL9 665 aa17.47■□□□□ 0.39
TSPAN17-206ENST00000507471 MKI67P46013 3256 aaKnown RBP17.47■□□□□ 0.39
TSPAN17-206ENST00000507471 UTYO14607 1347 aa17.47■□□□□ 0.39
TSPAN17-206ENST00000507471 HDLBPQ00341 1268 aaKnown RBP17.46■□□□□ 0.39
TSPAN17-206ENST00000507471 CHAF1AQ13111 956 aaPredicted RBP17.46■□□□□ 0.39
TSPAN17-206ENST00000507471 RABL6Q3YEC7 729 aaPredicted RBP17.46■□□□□ 0.39
TSPAN17-206ENST00000507471 LRRC24Q50LG9 513 aa17.46■□□□□ 0.39
TSPAN17-206ENST00000507471 VPS37DQ86XT2 251 aa17.46■□□□□ 0.39
TSPAN17-206ENST00000507471 BICC1Q9H694 974 aaKnown RBP17.46■□□□□ 0.39
TSPAN17-206ENST00000507471 PTCH2Q9Y6C5 1203 aa17.46■□□□□ 0.39
TSPAN17-206ENST00000507471 SNCAIPQ9Y6H5 919 aa17.46■□□□□ 0.39
TSPAN17-206ENST00000507471 ZSWIM8A7E2V4 1837 aa17.46■□□□□ 0.39
TSPAN17-206ENST00000507471 BRCA2P51587 3418 aa17.46■□□□□ 0.38
TSPAN17-206ENST00000507471 SPDYE5A6NIY4 337 aa17.45■□□□□ 0.38
TSPAN17-206ENST00000507471 SLC9C1Q4G0N8 1177 aa17.45■□□□□ 0.38
TSPAN17-206ENST00000507471 CAVIN4Q5BKX8 364 aa17.45■□□□□ 0.38
TSPAN17-206ENST00000507471 VGLL2Q8N8G2 317 aa17.45■□□□□ 0.38
TSPAN17-206ENST00000507471 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
TSPAN17-206ENST00000507471 TEKT1Q969V4 418 aa17.45■□□□□ 0.38
TSPAN17-206ENST00000507471 FRAT2O75474 233 aaPredicted RBP17.44■□□□□ 0.38
TSPAN17-206ENST00000507471 ARHGEF6Q15052 776 aa17.44■□□□□ 0.38
TSPAN17-206ENST00000507471 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
TSPAN17-206ENST00000507471 ZDHHC15Q96MV8 337 aa17.44■□□□□ 0.38
TSPAN17-206ENST00000507471 TMEM106CQ9BVX2 250 aa17.44■□□□□ 0.38
TSPAN17-206ENST00000507471 TLR2O60603 784 aa17.43■□□□□ 0.38
TSPAN17-206ENST00000507471 PDE8BO95263 885 aa17.43■□□□□ 0.38
TSPAN17-206ENST00000507471 NBPF11Q86T75 865 aa17.43■□□□□ 0.38
TSPAN17-206ENST00000507471 ERO1BQ86YB8 467 aa17.43■□□□□ 0.38
TSPAN17-206ENST00000507471 ANKRD44Q8N8A2 993 aa17.43■□□□□ 0.38
TSPAN17-206ENST00000507471 ZKSCAN4Q969J2 545 aaPredicted RBP17.43■□□□□ 0.38
TSPAN17-206ENST00000507471 WRNIP1Q96S55 665 aa17.43■□□□□ 0.38
TSPAN17-206ENST00000507471 BTBD19C9JJ37 291 aa17.42■□□□□ 0.38
TSPAN17-206ENST00000507471 CETPP11597 493 aa17.42■□□□□ 0.38
TSPAN17-206ENST00000507471 BCAMP50895 628 aa17.42■□□□□ 0.38
TSPAN17-206ENST00000507471 FAM83AQ86UY5 434 aa17.42■□□□□ 0.38
TSPAN17-206ENST00000507471 KLHDC4Q8TBB5 520 aa17.42■□□□□ 0.38
TSPAN17-206ENST00000507471 MRIQ9BWK5 157 aa17.42■□□□□ 0.38
TSPAN17-206ENST00000507471 ARHGAP39Q9C0H5 1083 aa17.42■□□□□ 0.38
TSPAN17-206ENST00000507471 TMOD2Q9NZR1 351 aa17.42■□□□□ 0.38
TSPAN17-206ENST00000507471 IRF6O14896 467 aa17.41■□□□□ 0.38
TSPAN17-206ENST00000507471 LACTBP83111 547 aaPredicted RBP17.41■□□□□ 0.38
TSPAN17-206ENST00000507471 FKBP1CQ5VVH2 108 aa17.41■□□□□ 0.38
TSPAN17-206ENST00000507471 APOBEC3HQ6NTF7 200 aaKnown RBP17.41■□□□□ 0.38
TSPAN17-206ENST00000507471 ZCCHC17Q9NP64 241 aaKnown RBP17.41■□□□□ 0.38
TSPAN17-206ENST00000507471 MAST3O60307 1309 aa17.41■□□□□ 0.38
TSPAN17-206ENST00000507471 RPAP1Q9BWH6 1393 aaPredicted RBP17.4■□□□□ 0.38
TSPAN17-206ENST00000507471 ANP32CO43423 234 aa17.4■□□□□ 0.38
TSPAN17-206ENST00000507471 WDHD1O75717 1129 aaPredicted RBP17.4■□□□□ 0.38
TSPAN17-206ENST00000507471 SNAPC2Q13487 334 aa17.4■□□□□ 0.38
TSPAN17-206ENST00000507471 SLC4A8Q2Y0W8 1093 aa17.4■□□□□ 0.38
TSPAN17-206ENST00000507471 SH3TC2Q8TF17 1288 aa17.4■□□□□ 0.38
TSPAN17-206ENST00000507471 HOOK2Q96ED9 719 aa17.4■□□□□ 0.38
TSPAN17-206ENST00000507471 SUGT1Q9Y2Z0 365 aa17.4■□□□□ 0.38
TSPAN17-206ENST00000507471 KIF16BQ96L93 1317 aa17.4■□□□□ 0.38
TSPAN17-206ENST00000507471 MYCP01106 439 aaPredicted RBP17.39■□□□□ 0.37
TSPAN17-206ENST00000507471 FGFR2P21802 821 aa17.39■□□□□ 0.37
TSPAN17-206ENST00000507471 PPIL2Q13356 520 aa17.39■□□□□ 0.37
TSPAN17-206ENST00000507471 KIF22Q14807 665 aa17.39■□□□□ 0.37
TSPAN17-206ENST00000507471 HHIPL2Q6UWX4 724 aa17.39■□□□□ 0.37
TSPAN17-206ENST00000507471 MYH13Q9UKX3 1938 aa17.39■□□□□ 0.37
TSPAN17-206ENST00000507471 PUM3Q15397 648 aaKnown RBP17.38■□□□□ 0.37
TSPAN17-206ENST00000507471 DCAF15Q66K64 600 aa17.38■□□□□ 0.37
TSPAN17-206ENST00000507471 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
TSPAN17-206ENST00000507471 GNRH1P01148 92 aa17.37■□□□□ 0.37
TSPAN17-206ENST00000507471 IFIT1P09914 478 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms