RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 PDE8BO95263 885 aa18.28■□□□□ 0.52
SEC24D-208ENST00000506622 CRKP46108 304 aa18.28■□□□□ 0.52
SEC24D-208ENST00000506622 TNNI2P48788 182 aa18.28■□□□□ 0.52
SEC24D-208ENST00000506622 CHAF1AQ13111 956 aaPredicted RBP18.28■□□□□ 0.52
SEC24D-208ENST00000506622 ANKRD44Q8N8A2 993 aa18.28■□□□□ 0.52
SEC24D-208ENST00000506622 TBC1D22AQ8WUA7 517 aa18.28■□□□□ 0.52
SEC24D-208ENST00000506622 TCP10L2B9ZVM9 353 aa18.27■□□□□ 0.52
SEC24D-208ENST00000506622 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.52
SEC24D-208ENST00000506622 ARAP2Q8WZ64 1704 aa18.27■□□□□ 0.52
SEC24D-208ENST00000506622 IGF2BP3O00425 579 aaKnown RBP eCLIP18.26■□□□□ 0.51
SEC24D-208ENST00000506622 HDLBPQ00341 1268 aaKnown RBP18.26■□□□□ 0.51
SEC24D-208ENST00000506622 USP44Q9H0E7 712 aa18.26■□□□□ 0.51
SEC24D-208ENST00000506622 LAMB1P07942 1786 aa18.26■□□□□ 0.51
SEC24D-208ENST00000506622 KLHDC4Q8TBB5 520 aa18.25■□□□□ 0.51
SEC24D-208ENST00000506622 TEKT1Q969V4 418 aa18.25■□□□□ 0.51
SEC24D-208ENST00000506622 TMEM39BQ9GZU3 492 aa18.25■□□□□ 0.51
SEC24D-208ENST00000506622 ELP3Q9H9T3 547 aa18.25■□□□□ 0.51
SEC24D-208ENST00000506622 SLC34A2O95436 690 aa18.24■□□□□ 0.51
SEC24D-208ENST00000506622 IFIT1P09914 478 aaKnown RBP18.24■□□□□ 0.51
SEC24D-208ENST00000506622 GJA5P36382 358 aa18.24■□□□□ 0.51
SEC24D-208ENST00000506622 BCAMP50895 628 aa18.24■□□□□ 0.51
SEC24D-208ENST00000506622 GRIK5Q16478 980 aa18.24■□□□□ 0.51
SEC24D-208ENST00000506622 VGLL2Q8N8G2 317 aa18.24■□□□□ 0.51
SEC24D-208ENST00000506622 OPTNQ96CV9 577 aa18.24■□□□□ 0.51
SEC24D-208ENST00000506622 TEPSINQ96N21 525 aa18.24■□□□□ 0.51
SEC24D-208ENST00000506622 TRIM17Q9Y577 477 aa18.24■□□□□ 0.51
SEC24D-208ENST00000506622 OTOFQ9HC10 1997 aa18.24■□□□□ 0.51
SEC24D-208ENST00000506622 MAP3K9P80192 1104 aa18.23■□□□□ 0.51
SEC24D-208ENST00000506622 SLFN5Q08AF3 891 aa18.23■□□□□ 0.51
SEC24D-208ENST00000506622 PUM3Q15397 648 aaKnown RBP18.23■□□□□ 0.51
SEC24D-208ENST00000506622 ERO1AQ96HE7 468 aa18.23■□□□□ 0.51
SEC24D-208ENST00000506622 MRIQ9BWK5 157 aa18.23■□□□□ 0.51
SEC24D-208ENST00000506622 TMOD2Q9NZR1 351 aa18.23■□□□□ 0.51
SEC24D-208ENST00000506622 KIAA0100Q14667 2235 aaKnown RBP18.23■□□□□ 0.51
SEC24D-208ENST00000506622 MKI67P46013 3256 aaKnown RBP18.23■□□□□ 0.51
SEC24D-208ENST00000506622 TESPA1A2RU30 521 aaPredicted RBP18.23■□□□□ 0.51
SEC24D-208ENST00000506622 CRHR2Q13324 411 aa18.23■□□□□ 0.51
SEC24D-208ENST00000506622 ALDH1L2Q3SY69 923 aa18.23■□□□□ 0.51
SEC24D-208ENST00000506622 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.23■□□□□ 0.51
SEC24D-208ENST00000506622 CDAN1Q8IWY9 1227 aa18.23■□□□□ 0.51
SEC24D-208ENST00000506622 CSADQ9Y600 493 aa18.23■□□□□ 0.51
SEC24D-208ENST00000506622 MAST3O60307 1309 aa18.22■□□□□ 0.51
SEC24D-208ENST00000506622 KIF16BQ96L93 1317 aa18.22■□□□□ 0.51
SEC24D-208ENST00000506622 EYA2O00167 538 aa18.22■□□□□ 0.51
SEC24D-208ENST00000506622 OTOP1Q7RTM1 612 aa18.22■□□□□ 0.51
SEC24D-208ENST00000506622 ZDHHC15Q96MV8 337 aa18.22■□□□□ 0.51
SEC24D-208ENST00000506622 PTPN18Q99952 460 aa18.22■□□□□ 0.51
SEC24D-208ENST00000506622 SMC4Q9NTJ3 1288 aa18.22■□□□□ 0.51
SEC24D-208ENST00000506622 SUGT1Q9Y2Z0 365 aa18.22■□□□□ 0.51
SEC24D-208ENST00000506622 BRCA2P51587 3418 aa18.21■□□□□ 0.51
SEC24D-208ENST00000506622 MYH13Q9UKX3 1938 aa18.21■□□□□ 0.51
SEC24D-208ENST00000506622 SLC5A1P13866 664 aa18.21■□□□□ 0.51
SEC24D-208ENST00000506622 FGFR2P21802 821 aa18.21■□□□□ 0.51
SEC24D-208ENST00000506622 CACNB3P54284 484 aa18.21■□□□□ 0.51
SEC24D-208ENST00000506622 VGLL4Q14135 290 aa18.21■□□□□ 0.51
SEC24D-208ENST00000506622 HOOK2Q96ED9 719 aa18.21■□□□□ 0.51
SEC24D-208ENST00000506622 GTF2A2P52657 109 aa18.2■□□□□ 0.5
SEC24D-208ENST00000506622 SP3Q02447 781 aa18.2■□□□□ 0.5
SEC24D-208ENST00000506622 FKBP1CQ5VVH2 108 aa18.2■□□□□ 0.5
SEC24D-208ENST00000506622 FAM83AQ86UY5 434 aa18.2■□□□□ 0.5
SEC24D-208ENST00000506622 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.2■□□□□ 0.5
SEC24D-208ENST00000506622 CD99L2Q8TCZ2 262 aa18.2■□□□□ 0.5
SEC24D-208ENST00000506622 LPIN2Q92539 896 aa18.2■□□□□ 0.5
SEC24D-208ENST00000506622 MS4A4AQ96JQ5 239 aa18.2■□□□□ 0.5
SEC24D-208ENST00000506622 AK9Q5TCS8 1911 aa18.19■□□□□ 0.5
SEC24D-208ENST00000506622 CCL15-CCL14A0A0B4J2E2 113 aa18.19■□□□□ 0.5
SEC24D-208ENST00000506622 UBTFL1P0CB47 393 aaPredicted RBP18.19■□□□□ 0.5
SEC24D-208ENST00000506622 RFX5P48382 616 aaPredicted RBP18.19■□□□□ 0.5
SEC24D-208ENST00000506622 CCL15Q16663 113 aa18.19■□□□□ 0.5
SEC24D-208ENST00000506622 INTS3Q68E01 1043 aaKnown RBP18.19■□□□□ 0.5
SEC24D-208ENST00000506622 HHIPL2Q6UWX4 724 aa18.19■□□□□ 0.5
SEC24D-208ENST00000506622 WDR66Q8TBY9 1149 aa18.19■□□□□ 0.5
SEC24D-208ENST00000506622 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
SEC24D-208ENST00000506622 OTUD5Q96G74 571 aa18.19■□□□□ 0.5
SEC24D-208ENST00000506622 CDCA7LQ96GN5 454 aa18.19■□□□□ 0.5
SEC24D-208ENST00000506622 EFCC1Q9HA90 598 aa18.19■□□□□ 0.5
SEC24D-208ENST00000506622 WDHD1O75717 1129 aaPredicted RBP18.18■□□□□ 0.5
SEC24D-208ENST00000506622 TAF1CQ15572 869 aaPredicted RBP18.18■□□□□ 0.5
SEC24D-208ENST00000506622 PRPF38BQ5VTL8 546 aaKnown RBP18.18■□□□□ 0.5
SEC24D-208ENST00000506622 APOBEC3HQ6NTF7 200 aaKnown RBP18.18■□□□□ 0.5
SEC24D-208ENST00000506622 BRI3BPQ8WY22 251 aa18.18■□□□□ 0.5
SEC24D-208ENST00000506622 ZFYVE28Q9HCC9 887 aa18.18■□□□□ 0.5
SEC24D-208ENST00000506622 PTPN22Q9Y2R2 807 aa18.18■□□□□ 0.5
SEC24D-208ENST00000506622 ARHGEF6Q15052 776 aa18.17■□□□□ 0.5
SEC24D-208ENST00000506622 WRNIP1Q96S55 665 aa18.17■□□□□ 0.5
SEC24D-208ENST00000506622 GNL3LQ9NVN8 582 aaKnown RBP18.17■□□□□ 0.5
SEC24D-208ENST00000506622 FBXO3Q9UK99 471 aa18.17■□□□□ 0.5
SEC24D-208ENST00000506622 HDAC5Q9UQL6 1122 aa18.17■□□□□ 0.5
SEC24D-208ENST00000506622 SPDYE5A6NIY4 337 aa18.16■□□□□ 0.5
SEC24D-208ENST00000506622 DCAF15Q66K64 600 aa18.16■□□□□ 0.5
SEC24D-208ENST00000506622 ATG9AQ7Z3C6 839 aa18.16■□□□□ 0.5
SEC24D-208ENST00000506622 ERO1BQ86YB8 467 aa18.16■□□□□ 0.5
SEC24D-208ENST00000506622 SIL1Q9H173 461 aa18.16■□□□□ 0.5
SEC24D-208ENST00000506622 CEP126Q9P2H0 1117 aa18.16■□□□□ 0.5
SEC24D-208ENST00000506622 CIAO1O76071 339 aa18.15■□□□□ 0.5
SEC24D-208ENST00000506622 CT47B1P0C2W7 299 aaPredicted RBP18.15■□□□□ 0.5
SEC24D-208ENST00000506622 CETPP11597 493 aa18.15■□□□□ 0.5
SEC24D-208ENST00000506622 ATP2B3Q16720 1220 aa18.15■□□□□ 0.5
SEC24D-208ENST00000506622 ZKSCAN4Q969J2 545 aaPredicted RBP18.15■□□□□ 0.5
SEC24D-208ENST00000506622 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms