RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 NECAB1Q8N987 351 aa29.23■■■□□ 2.27
DHFR-203ENST00000505337 PIM2Q9P1W9 311 aa29.23■■■□□ 2.27
DHFR-203ENST00000505337 Q6ZUG5 572 aa29.23■■■□□ 2.27
DHFR-203ENST00000505337 BRIP1Q9BX63 1249 aa29.23■■■□□ 2.27
DHFR-203ENST00000505337 AGXT2Q9BYV1 514 aa29.23■■■□□ 2.27
DHFR-203ENST00000505337 FGAP02671 866 aa29.22■■■□□ 2.27
DHFR-203ENST00000505337 GJB2P29033 226 aa29.22■■■□□ 2.27
DHFR-203ENST00000505337 EXOSC10Q01780 885 aaKnown RBP29.22■■■□□ 2.27
DHFR-203ENST00000505337 LMBRD1Q9NUN5 540 aa29.22■■■□□ 2.27
DHFR-203ENST00000505337 SYT1P21579 422 aa29.21■■■□□ 2.27
DHFR-203ENST00000505337 RPS8P62241 208 aaKnown RBP29.21■■■□□ 2.27
DHFR-203ENST00000505337 IMMTQ16891 758 aaKnown RBP29.21■■■□□ 2.27
DHFR-203ENST00000505337 FOXD4L5Q5VV16 416 aaPredicted RBP29.21■■■□□ 2.27
DHFR-203ENST00000505337 FOXD4L4Q8WXT5 416 aaPredicted RBP29.21■■■□□ 2.27
DHFR-203ENST00000505337 CCDC88AQ3V6T2 1871 aa29.21■■■□□ 2.27
DHFR-203ENST00000505337 MAP3K12Q12852 859 aa29.2■■■□□ 2.27
DHFR-203ENST00000505337 STX6O43752 255 aa29.2■■■□□ 2.26
DHFR-203ENST00000505337 C2CD5Q86YS7 1000 aa29.2■■■□□ 2.26
DHFR-203ENST00000505337 ST5P78524 1137 aa29.19■■■□□ 2.26
DHFR-203ENST00000505337 ZMYM6O95789 1325 aa29.18■■■□□ 2.26
DHFR-203ENST00000505337 NPHP1O15259 732 aa29.18■■■□□ 2.26
DHFR-203ENST00000505337 PDE6BP35913 854 aa29.18■■■□□ 2.26
DHFR-203ENST00000505337 KLHL40Q2TBA0 621 aa29.18■■■□□ 2.26
DHFR-203ENST00000505337 DALRD3Q5D0E6 543 aaKnown RBP29.18■■■□□ 2.26
DHFR-203ENST00000505337 GTF3C6Q969F1 213 aa29.18■■■□□ 2.26
DHFR-203ENST00000505337 MYH15Q9Y2K3 1946 aa29.18■■■□□ 2.26
DHFR-203ENST00000505337 DLEC1Q9Y238 1755 aa29.17■■■□□ 2.26
DHFR-203ENST00000505337 H0YIN7 160 aa29.17■■■□□ 2.26
DHFR-203ENST00000505337 ZSCAN22P10073 491 aaPredicted RBP29.17■■■□□ 2.26
DHFR-203ENST00000505337 MAGEB6Q8N7X4 407 aa29.17■■■□□ 2.26
DHFR-203ENST00000505337 CHAMP1Q96JM3 812 aa29.17■■■□□ 2.26
DHFR-203ENST00000505337 WTIPA6NIX2 430 aaPredicted RBP29.17■■■□□ 2.26
DHFR-203ENST00000505337 GYG1P46976 350 aa29.17■■■□□ 2.26
DHFR-203ENST00000505337 FBXL16Q8N461 479 aa29.17■■■□□ 2.26
DHFR-203ENST00000505337 BRF1Q92994 677 aa29.17■■■□□ 2.26
DHFR-203ENST00000505337 GZF1Q9H116 711 aaPredicted RBP29.17■■■□□ 2.26
DHFR-203ENST00000505337 STRBPQ96SI9 672 aaKnown RBP29.16■■■□□ 2.26
DHFR-203ENST00000505337 LRRC2Q9BYS8 371 aa29.16■■■□□ 2.26
DHFR-203ENST00000505337 LRRC37AA6NMS7 1700 aa29.15■■■□□ 2.26
DHFR-203ENST00000505337 HAND2P61296 217 aa29.15■■■□□ 2.26
DHFR-203ENST00000505337 ANKRD2Q9GZV1 360 aa29.15■■■□□ 2.26
DHFR-203ENST00000505337 GNL3LQ9NVN8 582 aaKnown RBP29.15■■■□□ 2.26
DHFR-203ENST00000505337 COL11A2P13942 1736 aaPredicted RBP29.15■■■□□ 2.26
DHFR-203ENST00000505337 ARFGEF1Q9Y6D6 1849 aa29.14■■■□□ 2.26
DHFR-203ENST00000505337 AIDAQ96BJ3 306 aa29.14■■■□□ 2.26
DHFR-203ENST00000505337 CAVIN4Q5BKX8 364 aa29.14■■■□□ 2.25
DHFR-203ENST00000505337 MB21D2Q8IYB1 491 aaPredicted RBP29.14■■■□□ 2.25
DHFR-203ENST00000505337 NBPF3Q9H094 633 aa29.14■■■□□ 2.25
DHFR-203ENST00000505337 MTMR6Q9Y217 621 aa29.14■■■□□ 2.25
DHFR-203ENST00000505337 F13A1P00488 732 aa29.13■■■□□ 2.25
DHFR-203ENST00000505337 ALX1Q15699 326 aa29.13■■■□□ 2.25
DHFR-203ENST00000505337 FAM84BQ96KN1 310 aaPredicted RBP29.13■■■□□ 2.25
DHFR-203ENST00000505337 DDX49Q9Y6V7 483 aaKnown RBP29.13■■■□□ 2.25
DHFR-203ENST00000505337 PDS5AQ29RF7 1337 aaKnown RBP29.13■■■□□ 2.25
DHFR-203ENST00000505337 PDIA4P13667 645 aaKnown RBP29.12■■■□□ 2.25
DHFR-203ENST00000505337 STK3Q13188 491 aa29.12■■■□□ 2.25
DHFR-203ENST00000505337 FBXO33Q7Z6M2 555 aa29.12■■■□□ 2.25
DHFR-203ENST00000505337 KLRG2A4D1S0 409 aaPredicted RBP29.11■■■□□ 2.25
DHFR-203ENST00000505337 ZNF213O14771 459 aa29.11■■■□□ 2.25
DHFR-203ENST00000505337 PFKFB2O60825 505 aa29.11■■■□□ 2.25
DHFR-203ENST00000505337 MBD4O95243 580 aa29.11■■■□□ 2.25
DHFR-203ENST00000505337 TTLL6Q8N841 843 aa29.11■■■□□ 2.25
DHFR-203ENST00000505337 WDR19Q8NEZ3 1342 aa29.11■■■□□ 2.25
DHFR-203ENST00000505337 IRS2Q9Y4H2 1338 aa29.11■■■□□ 2.25
DHFR-203ENST00000505337 SEMA3EO15041 775 aa29.11■■■□□ 2.25
DHFR-203ENST00000505337 ZBTB22O15209 634 aa29.11■■■□□ 2.25
DHFR-203ENST00000505337 PRPF40AO75400 957 aaKnown RBP29.11■■■□□ 2.25
DHFR-203ENST00000505337 SRGNP10124 158 aa29.11■■■□□ 2.25
DHFR-203ENST00000505337 FGD1P98174 961 aa29.11■■■□□ 2.25
DHFR-203ENST00000505337 IQSEC3Q9UPP2 1182 aaPredicted RBP29.11■■■□□ 2.25
DHFR-203ENST00000505337 FSD2A1L4K1 749 aa29.1■■■□□ 2.25
DHFR-203ENST00000505337 DTNBO60941 627 aa29.1■■■□□ 2.25
DHFR-203ENST00000505337 KLRK1P26718 216 aa29.1■■■□□ 2.25
DHFR-203ENST00000505337 GRAPQ13588 217 aa29.1■■■□□ 2.25
DHFR-203ENST00000505337 GRAPLQ8TC17 118 aaPredicted RBP29.1■■■□□ 2.25
DHFR-203ENST00000505337 ZNF622Q969S3 477 aaKnown RBP eCLIP29.1■■■□□ 2.25
DHFR-203ENST00000505337 EPB41L4AQ9HCS5 686 aaPredicted RBP29.1■■■□□ 2.25
DHFR-203ENST00000505337 DENND2AQ9ULE3 1009 aa29.1■■■□□ 2.25
DHFR-203ENST00000505337 LTBP1Q14766 1721 aa29.1■■■□□ 2.25
DHFR-203ENST00000505337 LAMB1P07942 1786 aa29.09■■■□□ 2.25
DHFR-203ENST00000505337 EVCP57679 992 aa29.09■■■□□ 2.25
DHFR-203ENST00000505337 SCRN1Q12765 414 aa29.09■■■□□ 2.25
DHFR-203ENST00000505337 ARHGAP27Q6ZUM4 889 aa29.09■■■□□ 2.25
DHFR-203ENST00000505337 NCOA7Q8NI08 942 aa29.09■■■□□ 2.25
DHFR-203ENST00000505337 LRP2BPQ9P2M1 347 aa29.09■■■□□ 2.25
DHFR-203ENST00000505337 BAZ2AQ9UIF9 1905 aaKnown RBP29.09■■■□□ 2.25
DHFR-203ENST00000505337 PDCP20941 246 aa29.08■■■□□ 2.25
DHFR-203ENST00000505337 APOBRQ0VD83 1088 aa29.08■■■□□ 2.25
DHFR-203ENST00000505337 TBC1D10CQ8IV04 446 aa29.08■■■□□ 2.25
DHFR-203ENST00000505337 PATL2C9JE40 543 aaKnown RBP29.08■■■□□ 2.25
DHFR-203ENST00000505337 CRY2Q49AN0 593 aa29.08■■■□□ 2.25
DHFR-203ENST00000505337 ARMT1Q9H993 441 aa29.08■■■□□ 2.25
DHFR-203ENST00000505337 MCM5P33992 734 aa29.07■■■□□ 2.24
DHFR-203ENST00000505337 ANTXR2P58335 489 aa29.07■■■□□ 2.24
DHFR-203ENST00000505337 VPS37DQ86XT2 251 aa29.07■■■□□ 2.24
DHFR-203ENST00000505337 TMEM87AQ8NBN3 555 aa29.07■■■□□ 2.24
DHFR-203ENST00000505337 LLPHQ9BRT6 129 aaKnown RBP29.07■■■□□ 2.24
DHFR-203ENST00000505337 GNAT2P19087 354 aa29.06■■■□□ 2.24
DHFR-203ENST00000505337 STYK1Q6J9G0 422 aa29.06■■■□□ 2.24
DHFR-203ENST00000505337 CHST3Q7LGC8 479 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms