RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 FGFR2P21802 821 aa24.96■■□□□ 1.59
UBE2D3-220ENST00000505307 RFX5P48382 616 aaPredicted RBP24.96■■□□□ 1.59
UBE2D3-220ENST00000505307 TDRD3Q9H7E2 651 aaKnown RBP24.96■■□□□ 1.59
UBE2D3-220ENST00000505307 SSC5DA1L4H1 1573 aa24.96■■□□□ 1.59
UBE2D3-220ENST00000505307 AOX1Q06278 1338 aa24.95■■□□□ 1.58
UBE2D3-220ENST00000505307 TBC1D8O95759 1140 aa24.95■■□□□ 1.58
UBE2D3-220ENST00000505307 TNNI2P48788 182 aa24.95■■□□□ 1.58
UBE2D3-220ENST00000505307 CHAF1AQ13111 956 aaPredicted RBP24.95■■□□□ 1.58
UBE2D3-220ENST00000505307 PKN2Q16513 984 aaKnown RBP24.95■■□□□ 1.58
UBE2D3-220ENST00000505307 LPIN2Q92539 896 aa24.95■■□□□ 1.58
UBE2D3-220ENST00000505307 NOB1Q9ULX3 412 aaKnown RBP24.95■■□□□ 1.58
UBE2D3-220ENST00000505307 IQSEC3Q9UPP2 1182 aaPredicted RBP24.95■■□□□ 1.58
UBE2D3-220ENST00000505307 ARAP2Q8WZ64 1704 aa24.95■■□□□ 1.58
UBE2D3-220ENST00000505307 MAST3O60307 1309 aa24.94■■□□□ 1.58
UBE2D3-220ENST00000505307 SLC5A1P13866 664 aa24.94■■□□□ 1.58
UBE2D3-220ENST00000505307 BCAMP50895 628 aa24.94■■□□□ 1.58
UBE2D3-220ENST00000505307 MLLT1Q03111 559 aaPredicted RBP24.94■■□□□ 1.58
UBE2D3-220ENST00000505307 ANKRD13AQ8IZ07 590 aa24.94■■□□□ 1.58
UBE2D3-220ENST00000505307 TEKT1Q969V4 418 aa24.94■■□□□ 1.58
UBE2D3-220ENST00000505307 FZD1Q9UP38 647 aa24.94■■□□□ 1.58
UBE2D3-220ENST00000505307 GPR25O00155 361 aa24.93■■□□□ 1.58
UBE2D3-220ENST00000505307 USP2O75604 605 aaPredicted RBP24.93■■□□□ 1.58
UBE2D3-220ENST00000505307 ZNF296Q8WUU4 475 aaPredicted RBP24.93■■□□□ 1.58
UBE2D3-220ENST00000505307 WNK4Q96J92 1243 aa24.93■■□□□ 1.58
UBE2D3-220ENST00000505307 CIAO1O76071 339 aa24.92■■□□□ 1.58
UBE2D3-220ENST00000505307 ARHGAP45Q92619 1136 aa24.92■■□□□ 1.58
UBE2D3-220ENST00000505307 WDR66Q8TBY9 1149 aa24.91■■□□□ 1.58
UBE2D3-220ENST00000505307 CLMNQ96JQ2 1002 aa24.91■■□□□ 1.58
UBE2D3-220ENST00000505307 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.91■■□□□ 1.58
UBE2D3-220ENST00000505307 RARSP54136 660 aaKnown RBP24.9■■□□□ 1.58
UBE2D3-220ENST00000505307 GRIK5Q16478 980 aa24.9■■□□□ 1.58
UBE2D3-220ENST00000505307 ATG9AQ7Z3C6 839 aa24.9■■□□□ 1.58
UBE2D3-220ENST00000505307 ZDHHC15Q96MV8 337 aa24.9■■□□□ 1.58
UBE2D3-220ENST00000505307 TMOD2Q9NZR1 351 aa24.9■■□□□ 1.58
UBE2D3-220ENST00000505307 CEP126Q9P2H0 1117 aa24.9■■□□□ 1.58
UBE2D3-220ENST00000505307 TCP10L2B9ZVM9 353 aa24.89■■□□□ 1.58
UBE2D3-220ENST00000505307 FKBP1CQ5VVH2 108 aa24.89■■□□□ 1.58
UBE2D3-220ENST00000505307 OTUD7BQ6GQQ9 843 aa24.89■■□□□ 1.58
UBE2D3-220ENST00000505307 HHIPL2Q6UWX4 724 aa24.89■■□□□ 1.58
UBE2D3-220ENST00000505307 IFNL1Q8IU54 200 aa24.89■■□□□ 1.58
UBE2D3-220ENST00000505307 TEPSINQ96N21 525 aa24.89■■□□□ 1.58
UBE2D3-220ENST00000505307 FKTNO75072 461 aa24.88■■□□□ 1.57
UBE2D3-220ENST00000505307 GNL3LQ9NVN8 582 aaKnown RBP24.88■■□□□ 1.57
UBE2D3-220ENST00000505307 IL15P40933 162 aaPredicted RBP24.87■■□□□ 1.57
UBE2D3-220ENST00000505307 FAM83AQ86UY5 434 aa24.87■■□□□ 1.57
UBE2D3-220ENST00000505307 HOOK2Q96ED9 719 aa24.87■■□□□ 1.57
UBE2D3-220ENST00000505307 TMEM39BQ9GZU3 492 aa24.87■■□□□ 1.57
UBE2D3-220ENST00000505307 LRRFIP2Q9Y608 721 aaKnown RBP24.87■■□□□ 1.57
UBE2D3-220ENST00000505307 ATP2B3Q16720 1220 aa24.86■■□□□ 1.57
UBE2D3-220ENST00000505307 INTS3Q68E01 1043 aaKnown RBP24.86■■□□□ 1.57
UBE2D3-220ENST00000505307 SIL1Q9H173 461 aa24.86■■□□□ 1.57
UBE2D3-220ENST00000505307 IPO8O15397 1037 aaKnown RBP24.85■■□□□ 1.57
UBE2D3-220ENST00000505307 GNAI3P08754 354 aa24.85■■□□□ 1.57
UBE2D3-220ENST00000505307 MAP3K9P80192 1104 aa24.85■■□□□ 1.57
UBE2D3-220ENST00000505307 APOBEC3HQ6NTF7 200 aaKnown RBP24.85■■□□□ 1.57
UBE2D3-220ENST00000505307 COPRSQ9NQ92 184 aa24.85■■□□□ 1.57
UBE2D3-220ENST00000505307 TESPA1A2RU30 521 aaPredicted RBP24.84■■□□□ 1.57
UBE2D3-220ENST00000505307 ZBTB22O15209 634 aa24.84■■□□□ 1.57
UBE2D3-220ENST00000505307 SEMA3EO15041 775 aa24.83■■□□□ 1.57
UBE2D3-220ENST00000505307 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.83■■□□□ 1.57
UBE2D3-220ENST00000505307 OPTNQ96CV9 577 aa24.83■■□□□ 1.57
UBE2D3-220ENST00000505307 MEIS3Q99687 375 aa24.83■■□□□ 1.57
UBE2D3-220ENST00000505307 HPS5Q9UPZ3 1129 aa24.83■■□□□ 1.57
UBE2D3-220ENST00000505307 CSADQ9Y600 493 aa24.83■■□□□ 1.57
UBE2D3-220ENST00000505307 LAMB1P07942 1786 aa24.82■■□□□ 1.56
UBE2D3-220ENST00000505307 IGF2BP3O00425 579 aaKnown RBP eCLIP24.82■■□□□ 1.56
UBE2D3-220ENST00000505307 GJA5P36382 358 aa24.82■■□□□ 1.56
UBE2D3-220ENST00000505307 FBXO46Q6PJ61 603 aaPredicted RBP24.82■■□□□ 1.56
UBE2D3-220ENST00000505307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.82■■□□□ 1.56
UBE2D3-220ENST00000505307 R3HDMLQ9H3Y0 253 aa24.82■■□□□ 1.56
UBE2D3-220ENST00000505307 ELP3Q9H9T3 547 aa24.82■■□□□ 1.56
UBE2D3-220ENST00000505307 DENND2AQ9ULE3 1009 aa24.82■■□□□ 1.56
UBE2D3-220ENST00000505307 CDAN1Q8IWY9 1227 aa24.81■■□□□ 1.56
UBE2D3-220ENST00000505307 CACNB3P54284 484 aa24.8■■□□□ 1.56
UBE2D3-220ENST00000505307 SOX10P56693 466 aa24.8■■□□□ 1.56
UBE2D3-220ENST00000505307 SALL1Q9NSC2 1324 aa24.8■■□□□ 1.56
UBE2D3-220ENST00000505307 RPAP1Q9BWH6 1393 aaPredicted RBP24.8■■□□□ 1.56
UBE2D3-220ENST00000505307 LDHBP07195 334 aaKnown RBP24.79■■□□□ 1.56
UBE2D3-220ENST00000505307 GTF2A2P52657 109 aa24.79■■□□□ 1.56
UBE2D3-220ENST00000505307 MTX1Q13505 466 aa24.79■■□□□ 1.56
UBE2D3-220ENST00000505307 VGLL4Q14135 290 aa24.79■■□□□ 1.56
UBE2D3-220ENST00000505307 DCAF15Q66K64 600 aa24.79■■□□□ 1.56
UBE2D3-220ENST00000505307 ZGPATQ8N5A5 531 aaKnown RBP24.79■■□□□ 1.56
UBE2D3-220ENST00000505307 PA2G4Q9UQ80 394 aaKnown RBP24.79■■□□□ 1.56
UBE2D3-220ENST00000505307 MS4A4AQ96JQ5 239 aa24.78■■□□□ 1.56
UBE2D3-220ENST00000505307 AKAP2Q9Y2D5 859 aa24.78■■□□□ 1.56
UBE2D3-220ENST00000505307 SRGAP3O43295 1099 aa24.77■■□□□ 1.56
UBE2D3-220ENST00000505307 ATF7IPQ6VMQ6 1270 aa24.77■■□□□ 1.56
UBE2D3-220ENST00000505307 FAM151AQ8WW52 585 aa24.77■■□□□ 1.56
UBE2D3-220ENST00000505307 ERO1AQ96HE7 468 aa24.77■■□□□ 1.56
UBE2D3-220ENST00000505307 PTPN18Q99952 460 aa24.77■■□□□ 1.56
UBE2D3-220ENST00000505307 DAGLAQ9Y4D2 1042 aa24.77■■□□□ 1.56
UBE2D3-220ENST00000505307 MYH13Q9UKX3 1938 aa24.76■■□□□ 1.55
UBE2D3-220ENST00000505307 OTOFQ9HC10 1997 aa24.76■■□□□ 1.55
UBE2D3-220ENST00000505307 SPDYE5A6NIY4 337 aa24.76■■□□□ 1.55
UBE2D3-220ENST00000505307 PHKA1P46020 1223 aa24.76■■□□□ 1.55
UBE2D3-220ENST00000505307 CRHR2Q13324 411 aa24.76■■□□□ 1.55
UBE2D3-220ENST00000505307 ERO1BQ86YB8 467 aa24.76■■□□□ 1.55
UBE2D3-220ENST00000505307 TRIM27P14373 513 aa24.75■■□□□ 1.55
UBE2D3-220ENST00000505307 PRDX5P30044 214 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms