RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 DDNO94850 711 aaPredicted RBP6.06□□□□□ -1.44
LMNB1-208ENST00000504788 KCNJ4P48050 445 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 GTF2IP78347 998 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 RFX7Q2KHR2 1363 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 CAVIN4Q5BKX8 364 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 TTLL5Q6EMB2 1281 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 RSBN1LQ6PCB5 846 aaPredicted RBP6.06□□□□□ -1.44
LMNB1-208ENST00000504788 TBC1D9Q6ZT07 1266 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 USP17L1Q7RTZ2 530 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 ADGRA1Q86SQ6 560 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 NIM1KQ8IY84 436 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 GPC2Q8N158 579 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 SPATA5Q8NB90 893 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 DPF2Q92785 391 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 PAPPA2Q9BXP8 1791 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 PIH1D3Q9NQM4 214 aaKnown RBP6.06□□□□□ -1.44
LMNB1-208ENST00000504788 PCDHAC2Q9Y5I4 1007 aa6.06□□□□□ -1.44
LMNB1-208ENST00000504788 UQCRFS1P1P0C7P4 283 aa6.05□□□□□ -1.44
LMNB1-208ENST00000504788 HIRAP54198 1017 aaPredicted RBP6.05□□□□□ -1.44
LMNB1-208ENST00000504788 ZNF280AP59817 542 aaPredicted RBP6.05□□□□□ -1.44
LMNB1-208ENST00000504788 CIAPIN1Q6FI81 312 aa6.05□□□□□ -1.44
LMNB1-208ENST00000504788 JDP2Q8WYK2 163 aa6.05□□□□□ -1.44
LMNB1-208ENST00000504788 NSUN4Q96CB9 384 aaKnown RBP6.05□□□□□ -1.44
LMNB1-208ENST00000504788 TMX4Q9H1E5 349 aaPredicted RBP6.05□□□□□ -1.44
LMNB1-208ENST00000504788 SNRKQ9NRH2 765 aa6.05□□□□□ -1.44
LMNB1-208ENST00000504788 DENND2AQ9ULE3 1009 aa6.05□□□□□ -1.44
LMNB1-208ENST00000504788 JAG2Q9Y219 1238 aa6.05□□□□□ -1.44
LMNB1-208ENST00000504788 PCNTO95613 3336 aa6.05□□□□□ -1.44
LMNB1-208ENST00000504788 GAKO14976 1311 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 POTEB2H3BUK9 544 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 FOXP2O15409 715 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 GLRX3O76003 335 aaKnown RBP6.04□□□□□ -1.44
LMNB1-208ENST00000504788 IFIT2P09913 472 aaKnown RBP6.04□□□□□ -1.44
LMNB1-208ENST00000504788 MKRN4PQ13434 485 aaPredicted RBP6.04□□□□□ -1.44
LMNB1-208ENST00000504788 SLFNL1Q499Z3 407 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 CCDC158Q5M9N0 1113 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 MFSD14BQ5SR56 506 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 MTMR14Q8NCE2 650 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 AGBL3Q8NEM8 1001 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 FAM163AQ96GL9 167 aaPredicted RBP6.04□□□□□ -1.44
LMNB1-208ENST00000504788 MRIQ9BWK5 157 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 IL25Q9H293 177 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 BOLA2Q9H3K6 86 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 GPRC5DQ9NZD1 345 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 SUGT1Q9Y2Z0 365 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 GMPSP49915 693 aaPredicted RBP6.04□□□□□ -1.44
LMNB1-208ENST00000504788 TTC39AQ5SRH9 613 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 TTC22Q5TAA0 569 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 APOBEC3HQ6NTF7 200 aaKnown RBP6.04□□□□□ -1.44
LMNB1-208ENST00000504788 KBTBD3Q8NAB2 608 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 WDR66Q8TBY9 1149 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 PAG1Q9NWQ8 432 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 PGAP2Q9UHJ9 254 aa6.04□□□□□ -1.44
LMNB1-208ENST00000504788 MYO3BQ8WXR4 1341 aa6.03□□□□□ -1.44
LMNB1-208ENST00000504788 BAZ2AQ9UIF9 1905 aaKnown RBP6.03□□□□□ -1.44
LMNB1-208ENST00000504788 IGSF3O75054 1194 aa6.03□□□□□ -1.44
LMNB1-208ENST00000504788 RPS12P25398 132 aaKnown RBP6.03□□□□□ -1.44
LMNB1-208ENST00000504788 EPS15P42566 896 aa6.03□□□□□ -1.44
LMNB1-208ENST00000504788 RHBDL3P58872 404 aa6.03□□□□□ -1.44
LMNB1-208ENST00000504788 HDLBPQ00341 1268 aaKnown RBP6.03□□□□□ -1.44
LMNB1-208ENST00000504788 MECOMQ03112 1051 aa6.03□□□□□ -1.44
LMNB1-208ENST00000504788 DIXDC1Q155Q3 683 aa6.03□□□□□ -1.44
LMNB1-208ENST00000504788 TBC1D22AQ8WUA7 517 aa6.03□□□□□ -1.44
LMNB1-208ENST00000504788 RIOK1Q9BRS2 568 aaKnown RBP6.03□□□□□ -1.44
LMNB1-208ENST00000504788 MKRN1Q9UHC7 482 aaKnown RBP6.03□□□□□ -1.44
LMNB1-208ENST00000504788 ASTN2O75129 1339 aaPredicted RBP6.02□□□□□ -1.45
LMNB1-208ENST00000504788 GOLIM4O00461 696 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 WNT10BO00744 389 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 KIF3CO14782 793 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 GALR2O43603 387 aaPredicted RBP6.02□□□□□ -1.45
LMNB1-208ENST00000504788 POTEJP0CG39 1038 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 SDSP20132 328 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 ADD2P35612 726 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 EIF6P56537 245 aaKnown RBP6.02□□□□□ -1.45
LMNB1-208ENST00000504788 TNIP1Q15025 636 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 BMP2KLQ5H9B9 411 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 HHIPL2Q6UWX4 724 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 TICAM2Q86XR7 235 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 VPS37DQ86XT2 251 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 KIAA0825Q8IV33 1275 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 TRPM4Q8TD43 1214 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 PRMT6Q96LA8 375 aaPredicted RBP6.02□□□□□ -1.45
LMNB1-208ENST00000504788 NMRK2Q9NPI5 230 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 GNL3LQ9NVN8 582 aaKnown RBP6.02□□□□□ -1.45
LMNB1-208ENST00000504788 CNOT7Q9UIV1 285 aaKnown RBP6.02□□□□□ -1.45
LMNB1-208ENST00000504788 SERPINA10Q9UK55 444 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 LAMB1P07942 1786 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 MYH1P12882 1939 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 GPR75-ASB3A0A0A6YYF3 556 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 MAP4K4O95819 1239 aaPredicted RBP6.02□□□□□ -1.45
LMNB1-208ENST00000504788 USP17L8P0C7I0 530 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 PDE6AP16499 860 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 PPP4CP60510 307 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 CHAF1AQ13111 956 aaPredicted RBP6.02□□□□□ -1.45
LMNB1-208ENST00000504788 NBPF9Q3BBW0 867 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 GORABQ5T7V8 394 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 SAMD7Q7Z3H4 446 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 MICALL2Q8IY33 904 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 ZDHHC15Q96MV8 337 aa6.02□□□□□ -1.45
LMNB1-208ENST00000504788 DNAJC2Q99543 621 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms