RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 HDLBPQ00341 1268 aaKnown RBP31.48■■■□□ 2.63
PVT1-201ENST00000504719 SPDYE2Q495Y8 402 aa31.48■■■□□ 2.63
PVT1-201ENST00000504719 ZNF70Q9UC06 446 aaPredicted RBP31.48■■■□□ 2.63
PVT1-201ENST00000504719 SUGT1Q9Y2Z0 365 aa31.48■■■□□ 2.63
PVT1-201ENST00000504719 AKAP11Q9UKA4 1901 aa31.47■■■□□ 2.63
PVT1-201ENST00000504719 ARMC9Q7Z3E5 817 aa31.47■■■□□ 2.63
PVT1-201ENST00000504719 TDRD3Q9H7E2 651 aaKnown RBP31.47■■■□□ 2.63
PVT1-201ENST00000504719 RCAN3Q9UKA8 241 aa31.47■■■□□ 2.63
PVT1-201ENST00000504719 MRIQ9BWK5 157 aa31.46■■■□□ 2.63
PVT1-201ENST00000504719 TSKSQ9UJT2 592 aa31.46■■■□□ 2.63
PVT1-201ENST00000504719 PRKG1Q13976 671 aa31.45■■■□□ 2.63
PVT1-201ENST00000504719 WDR66Q8TBY9 1149 aa31.45■■■□□ 2.63
PVT1-201ENST00000504719 SSC5DA1L4H1 1573 aa31.44■■■□□ 2.62
PVT1-201ENST00000504719 PNMA6EA0A0J9YXQ4 647 aa31.44■■■□□ 2.62
PVT1-201ENST00000504719 FTSJ3Q8IY81 847 aaKnown RBP31.44■■■□□ 2.62
PVT1-201ENST00000504719 GNL3LQ9NVN8 582 aaKnown RBP31.44■■■□□ 2.62
PVT1-201ENST00000504719 TNFAIP1Q13829 316 aa31.43■■■□□ 2.62
PVT1-201ENST00000504719 RASA3Q14644 834 aa31.43■■■□□ 2.62
PVT1-201ENST00000504719 TEKT1Q969V4 418 aa31.43■■■□□ 2.62
PVT1-201ENST00000504719 CSRNP1Q96S65 589 aa31.43■■■□□ 2.62
PVT1-201ENST00000504719 ANGEL1Q9UNK9 670 aaKnown RBP31.43■■■□□ 2.62
PVT1-201ENST00000504719 MAST3O60307 1309 aa31.43■■■□□ 2.62
PVT1-201ENST00000504719 ZBTB22O15209 634 aa31.42■■■□□ 2.62
PVT1-201ENST00000504719 RLBP1P12271 317 aa31.42■■■□□ 2.62
PVT1-201ENST00000504719 ADORA1P30542 326 aa31.42■■■□□ 2.62
PVT1-201ENST00000504719 PHKA1P46020 1223 aa31.42■■■□□ 2.62
PVT1-201ENST00000504719 TFCP2Q12800 502 aa31.42■■■□□ 2.62
PVT1-201ENST00000504719 MAP3K11Q16584 847 aa31.42■■■□□ 2.62
PVT1-201ENST00000504719 SUPT20HL1Q3ZLR7 823 aa31.42■■■□□ 2.62
PVT1-201ENST00000504719 LDLRAD1Q5T700 205 aa31.42■■■□□ 2.62
PVT1-201ENST00000504719 FZD1Q9UP38 647 aa31.42■■■□□ 2.62
PVT1-201ENST00000504719 TIMM10P62072 90 aa31.41■■■□□ 2.62
PVT1-201ENST00000504719 NBPF12Q5TAG4 269 aaPredicted RBP31.41■■■□□ 2.62
PVT1-201ENST00000504719 REM2Q8IYK8 340 aaPredicted RBP31.41■■■□□ 2.62
PVT1-201ENST00000504719 AKAP2Q9Y2D5 859 aa31.41■■■□□ 2.62
PVT1-201ENST00000504719 SEMA3EO15041 775 aa31.4■■■□□ 2.62
PVT1-201ENST00000504719 ZDHHC15Q96MV8 337 aa31.4■■■□□ 2.62
PVT1-201ENST00000504719 DENND2AQ9ULE3 1009 aa31.4■■■□□ 2.62
PVT1-201ENST00000504719 CASP8AP2Q9UKL3 1982 aa31.39■■■□□ 2.62
PVT1-201ENST00000504719 PPP1R12BO60237 982 aaPredicted RBP31.39■■■□□ 2.62
PVT1-201ENST00000504719 CCDC102BQ68D86 513 aa31.39■■■□□ 2.62
PVT1-201ENST00000504719 HHIPL2Q6UWX4 724 aa31.39■■■□□ 2.62
PVT1-201ENST00000504719 ITPRIPQ8IWB1 547 aa31.39■■■□□ 2.62
PVT1-201ENST00000504719 SAGE1Q9NXZ1 904 aa31.39■■■□□ 2.62
PVT1-201ENST00000504719 A0A1B0GUL7 405 aa31.38■■■□□ 2.61
PVT1-201ENST00000504719 TCP10L2B9ZVM9 353 aa31.38■■■□□ 2.61
PVT1-201ENST00000504719 ZBTB7BO15156 539 aaPredicted RBP31.38■■■□□ 2.61
PVT1-201ENST00000504719 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.38■■■□□ 2.61
PVT1-201ENST00000504719 ATP8B2P98198 1209 aa31.37■■■□□ 2.61
PVT1-201ENST00000504719 G3BP1Q13283 466 aaKnown RBP eCLIP31.37■■■□□ 2.61
PVT1-201ENST00000504719 POLA2Q14181 598 aa31.37■■■□□ 2.61
PVT1-201ENST00000504719 APOBEC3HQ6NTF7 200 aaKnown RBP31.37■■■□□ 2.61
PVT1-201ENST00000504719 RNF186Q9NXI6 227 aa31.37■■■□□ 2.61
PVT1-201ENST00000504719 SALL1Q9NSC2 1324 aa31.37■■■□□ 2.61
PVT1-201ENST00000504719 TNNI2P48788 182 aa31.36■■■□□ 2.61
PVT1-201ENST00000504719 XAGE2Q96GT9 111 aa31.36■■■□□ 2.61
PVT1-201ENST00000504719 TEPSINQ96N21 525 aa31.36■■■□□ 2.61
PVT1-201ENST00000504719 C1orf115Q9H7X2 142 aa31.35■■■□□ 2.61
PVT1-201ENST00000504719 UNCXA6NJT0 531 aa31.34■■■□□ 2.61
PVT1-201ENST00000504719 USP2O75604 605 aaPredicted RBP31.34■■■□□ 2.61
PVT1-201ENST00000504719 PRDX5P30044 214 aa31.34■■■□□ 2.61
PVT1-201ENST00000504719 PANK1Q8TE04 598 aa31.34■■■□□ 2.61
PVT1-201ENST00000504719 SSH3Q8TE77 659 aa31.34■■■□□ 2.61
PVT1-201ENST00000504719 TRPA1O75762 1119 aa31.33■■■□□ 2.61
PVT1-201ENST00000504719 IREB2P48200 963 aaKnown RBP31.33■■■□□ 2.61
PVT1-201ENST00000504719 TMEM39BQ9GZU3 492 aa31.33■■■□□ 2.61
PVT1-201ENST00000504719 LDHBP07195 334 aaKnown RBP31.32■■■□□ 2.6
PVT1-201ENST00000504719 CACNB3P54284 484 aa31.32■■■□□ 2.6
PVT1-201ENST00000504719 MKRN3Q13064 507 aaKnown RBP31.32■■■□□ 2.6
PVT1-201ENST00000504719 RASGRF1Q13972 1273 aa31.32■■■□□ 2.6
PVT1-201ENST00000504719 MVPQ14764 893 aaKnown RBP31.32■■■□□ 2.6
PVT1-201ENST00000504719 CDAN1Q8IWY9 1227 aa31.32■■■□□ 2.6
PVT1-201ENST00000504719 SLC10A4Q96EP9 437 aa31.32■■■□□ 2.6
PVT1-201ENST00000504719 NEUROD6Q96NK8 337 aa31.32■■■□□ 2.6
PVT1-201ENST00000504719 PDS5AQ29RF7 1337 aaKnown RBP31.31■■■□□ 2.6
PVT1-201ENST00000504719 OTOFQ9HC10 1997 aa31.31■■■□□ 2.6
PVT1-201ENST00000504719 MS4A1P11836 297 aa31.31■■■□□ 2.6
PVT1-201ENST00000504719 TM4SF4P48230 202 aa31.31■■■□□ 2.6
PVT1-201ENST00000504719 FKBP1CQ5VVH2 108 aa31.31■■■□□ 2.6
PVT1-201ENST00000504719 SPRYD7Q5W111 196 aa31.31■■■□□ 2.6
PVT1-201ENST00000504719 TMOD2Q9NZR1 351 aa31.31■■■□□ 2.6
PVT1-201ENST00000504719 MYH2Q9UKX2 1941 aa31.3■■■□□ 2.6
PVT1-201ENST00000504719 DIXDC1Q155Q3 683 aa31.3■■■□□ 2.6
PVT1-201ENST00000504719 ZGPATQ8N5A5 531 aaKnown RBP31.3■■■□□ 2.6
PVT1-201ENST00000504719 CLMNQ96JQ2 1002 aa31.3■■■□□ 2.6
PVT1-201ENST00000504719 DAGLAQ9Y4D2 1042 aa31.3■■■□□ 2.6
PVT1-201ENST00000504719 CAPN15O75808 1086 aa31.29■■■□□ 2.6
PVT1-201ENST00000504719 FAM83AQ86UY5 434 aa31.29■■■□□ 2.6
PVT1-201ENST00000504719 LAMB1P07942 1786 aa31.28■■■□□ 2.6
PVT1-201ENST00000504719 ANKRD13AQ8IZ07 590 aa31.27■■■□□ 2.6
PVT1-201ENST00000504719 WNK4Q96J92 1243 aa31.27■■■□□ 2.6
PVT1-201ENST00000504719 SREBF2Q12772 1141 aa31.26■■■□□ 2.59
PVT1-201ENST00000504719 GPR108Q9NPR9 543 aa31.26■■■□□ 2.59
PVT1-201ENST00000504719 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.26■■■□□ 2.59
PVT1-201ENST00000504719 SURF6O75683 361 aaKnown RBP31.25■■■□□ 2.59
PVT1-201ENST00000504719 ZBTB48P10074 688 aaPredicted RBP31.25■■■□□ 2.59
PVT1-201ENST00000504719 GORABQ5T7V8 394 aa31.25■■■□□ 2.59
PVT1-201ENST00000504719 CDC42EP5Q6NZY7 148 aa31.25■■■□□ 2.59
PVT1-201ENST00000504719 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.25■■■□□ 2.59
PVT1-201ENST00000504719 NOP58Q9Y2X3 529 aaKnown RBP31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms