RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 PCNTO95613 3336 aa10.08□□□□□ -0.8
RFC1-207ENST00000504554 ASTN2O75129 1339 aaPredicted RBP10.07□□□□□ -0.8
RFC1-207ENST00000504554 ZBED9Q6R2W3 1325 aa10.07□□□□□ -0.8
RFC1-207ENST00000504554 PLIN1O60240 522 aa10.07□□□□□ -0.8
RFC1-207ENST00000504554 TRIM27P14373 513 aa10.07□□□□□ -0.8
RFC1-207ENST00000504554 TBC1D10BQ4KMP7 808 aaPredicted RBP10.07□□□□□ -0.8
RFC1-207ENST00000504554 RSBN1LQ6PCB5 846 aaPredicted RBP10.07□□□□□ -0.8
RFC1-207ENST00000504554 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
RFC1-207ENST00000504554 KCTD12Q96CX2 325 aaKnown RBP10.07□□□□□ -0.8
RFC1-207ENST00000504554 MEIS3Q99687 375 aa10.07□□□□□ -0.8
RFC1-207ENST00000504554 API5Q9BZZ5 524 aaKnown RBP10.07□□□□□ -0.8
RFC1-207ENST00000504554 ANKRD2Q9GZV1 360 aa10.07□□□□□ -0.8
RFC1-207ENST00000504554 PGAP2Q9UHJ9 254 aa10.07□□□□□ -0.8
RFC1-207ENST00000504554 USP17L3A6NCW0 530 aa10.06□□□□□ -0.8
RFC1-207ENST00000504554 USP17L4A6NCW7 530 aa10.06□□□□□ -0.8
RFC1-207ENST00000504554 DACT2Q5SW24 774 aa10.06□□□□□ -0.8
RFC1-207ENST00000504554 RBM26Q5T8P6 1007 aaKnown RBP10.06□□□□□ -0.8
RFC1-207ENST00000504554 C15orf52Q6ZUT6 534 aaKnown RBP10.06□□□□□ -0.8
RFC1-207ENST00000504554 USP17L1Q7RTZ2 530 aa10.06□□□□□ -0.8
RFC1-207ENST00000504554 PODNQ7Z5L7 613 aa10.06□□□□□ -0.8
RFC1-207ENST00000504554 ARHGAP45Q92619 1136 aa10.06□□□□□ -0.8
RFC1-207ENST00000504554 KLRG1Q96E93 195 aa10.06□□□□□ -0.8
RFC1-207ENST00000504554 GLIS2Q9BZE0 524 aaPredicted RBP10.06□□□□□ -0.8
RFC1-207ENST00000504554 COA1Q9GZY4 146 aa10.06□□□□□ -0.8
RFC1-207ENST00000504554 CNNM1Q9NRU3 951 aa10.06□□□□□ -0.8
RFC1-207ENST00000504554 EVI5O60447 810 aa10.05□□□□□ -0.8
RFC1-207ENST00000504554 RPS12P25398 132 aaKnown RBP10.05□□□□□ -0.8
RFC1-207ENST00000504554 KCNJ4P48050 445 aa10.05□□□□□ -0.8
RFC1-207ENST00000504554 PTPN12Q05209 780 aaKnown RBP10.05□□□□□ -0.8
RFC1-207ENST00000504554 TAF7LQ5H9L4 462 aa10.05□□□□□ -0.8
RFC1-207ENST00000504554 CST9Q5W186 159 aa10.05□□□□□ -0.8
RFC1-207ENST00000504554 INTS3Q68E01 1043 aaKnown RBP10.05□□□□□ -0.8
RFC1-207ENST00000504554 ATF7IPQ6VMQ6 1270 aa10.05□□□□□ -0.8
RFC1-207ENST00000504554 VGLL2Q8N8G2 317 aa10.05□□□□□ -0.8
RFC1-207ENST00000504554 FRAT1Q92837 279 aaPredicted RBP10.05□□□□□ -0.8
RFC1-207ENST00000504554 CLUAP1Q96AJ1 413 aa10.05□□□□□ -0.8
RFC1-207ENST00000504554 CD209Q9NNX6 404 aa10.05□□□□□ -0.8
RFC1-207ENST00000504554 LRRFIP2Q9Y608 721 aaKnown RBP10.05□□□□□ -0.8
RFC1-207ENST00000504554 ZNF609O15014 1411 aa10.05□□□□□ -0.8
RFC1-207ENST00000504554 ZNF646O15015 1829 aaPredicted RBP10.05□□□□□ -0.8
RFC1-207ENST00000504554 KIF16BQ96L93 1317 aa10.05□□□□□ -0.8
RFC1-207ENST00000504554 A0A1B0GUL6 1792 aa10.04□□□□□ -0.8
RFC1-207ENST00000504554 H7C1D1 291 aa10.04□□□□□ -0.8
RFC1-207ENST00000504554 UBTFL1P0CB47 393 aaPredicted RBP10.04□□□□□ -0.8
RFC1-207ENST00000504554 ZNF280AP59817 542 aaPredicted RBP10.04□□□□□ -0.8
RFC1-207ENST00000504554 GTF2IP78347 998 aa10.04□□□□□ -0.8
RFC1-207ENST00000504554 CERS5Q8N5B7 392 aa10.04□□□□□ -0.8
RFC1-207ENST00000504554 TMEM57Q8N5G2 664 aa10.04□□□□□ -0.8
RFC1-207ENST00000504554 AGBL3Q8NEM8 1001 aa10.04□□□□□ -0.8
RFC1-207ENST00000504554 FBXW7Q969H0 707 aa10.04□□□□□ -0.8
RFC1-207ENST00000504554 MKRN1Q9UHC7 482 aaKnown RBP10.04□□□□□ -0.8
RFC1-207ENST00000504554 SCAF8Q9UPN6 1271 aaKnown RBP10.04□□□□□ -0.8
RFC1-207ENST00000504554 PA2G4Q9UQ80 394 aaKnown RBP10.04□□□□□ -0.8
RFC1-207ENST00000504554 JAG2Q9Y219 1238 aa10.04□□□□□ -0.8
RFC1-207ENST00000504554 TMEM88BA6NKF7 163 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 ADM5C9JUS6 153 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 RLBP1P12271 317 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 IL1R1P14778 569 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 GYG1P46976 350 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 KIF4BQ2VIQ3 1234 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 STRIP1Q5VSL9 837 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 TTLL5Q6EMB2 1281 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 ATG9AQ7Z3C6 839 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 USP48Q86UV5 1035 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 JMYQ8N9B5 988 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 FAM84BQ96KN1 310 aaPredicted RBP10.03□□□□□ -0.8
RFC1-207ENST00000504554 SLC4A5Q9BY07 1137 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 EMILIN3Q9NT22 766 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 PCDHAC2Q9Y5I4 1007 aa10.03□□□□□ -0.8
RFC1-207ENST00000504554 SPDYE16A6NNV3 312 aaPredicted RBP10.02□□□□□ -0.81
RFC1-207ENST00000504554 USP17L8P0C7I0 530 aa10.02□□□□□ -0.81
RFC1-207ENST00000504554 FGFR2P21802 821 aa10.02□□□□□ -0.81
RFC1-207ENST00000504554 PTPREP23469 700 aa10.02□□□□□ -0.81
RFC1-207ENST00000504554 UBE4AQ14139 1066 aa10.02□□□□□ -0.81
RFC1-207ENST00000504554 SCARF1Q14162 830 aa10.02□□□□□ -0.81
RFC1-207ENST00000504554 METTL24Q5JXM2 366 aa10.02□□□□□ -0.81
RFC1-207ENST00000504554 MYOZ2Q9NPC6 264 aa10.02□□□□□ -0.81
RFC1-207ENST00000504554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.02□□□□□ -0.81
RFC1-207ENST00000504554 AOX1Q06278 1338 aa10.02□□□□□ -0.81
RFC1-207ENST00000504554 MROH5Q6ZUA9 1318 aa10.02□□□□□ -0.81
RFC1-207ENST00000504554 CNTNAP1P78357 1384 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 EYA2O00167 538 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 IPO8O15397 1037 aaKnown RBP10.01□□□□□ -0.81
RFC1-207ENST00000504554 PDE8BO95263 885 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 GRIK5Q16478 980 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 NBPF9Q3BBW0 867 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 ZKSCAN2Q63HK3 967 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 FBXO33Q7Z6M2 555 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 KIAA0825Q8IV33 1275 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 TDRD7Q8NHU6 1098 aaKnown RBP10.01□□□□□ -0.81
RFC1-207ENST00000504554 ADAM33Q9BZ11 813 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 SIL1Q9H173 461 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 GGA3Q9NZ52 723 aa10.01□□□□□ -0.81
RFC1-207ENST00000504554 PSME4Q14997 1843 aa10□□□□□ -0.81
RFC1-207ENST00000504554 PNMA6EA0A0J9YXQ4 647 aa10□□□□□ -0.81
RFC1-207ENST00000504554 RASSF10A6NK89 507 aa10□□□□□ -0.81
RFC1-207ENST00000504554 ZMYND10O75800 440 aa10□□□□□ -0.81
RFC1-207ENST00000504554 SASH1O94885 1247 aa10□□□□□ -0.81
RFC1-207ENST00000504554 CELF2O95319 508 aaKnown RBP10□□□□□ -0.81
RFC1-207ENST00000504554 HIBADHP31937 336 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms