RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SLC38A3Q99624 504 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 USP26Q9BXU7 913 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 RAPGEFL1Q9UHV5 662 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 ZBTB39O15060 712 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 ESRRAP11474 423 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 DRD2P14416 443 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 RFX1P22670 979 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 ZNF124Q15973 351 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 HGSNATQ68CP4 663 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 ZNF765Q7L2R6 523 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 SIAH1Q8IUQ4 282 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 FAM168AQ92567 244 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 NUDT16Q96DE0 195 aaKnown RBP4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 ACSS3Q9H6R3 686 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 MKNK2Q9HBH9 465 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 FAM53CQ9NYF3 392 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 KANSL3Q9P2N6 904 aa4.85□□□□□ -1.63
HMGB1P35-201ENST00000503360 SUPT5HO00267 1087 aaKnown RBP4.84□□□□□ -1.63
HMGB1P35-201ENST00000503360 PRMT3O60678 531 aa4.84□□□□□ -1.63
HMGB1P35-201ENST00000503360 EDN3P14138 238 aa4.84□□□□□ -1.63
HMGB1P35-201ENST00000503360 CYP27C1Q4G0S4 372 aa4.84□□□□□ -1.63
HMGB1P35-201ENST00000503360 CILP2Q8IUL8 1156 aa4.84□□□□□ -1.63
HMGB1P35-201ENST00000503360 C1orf127Q8N9H9 656 aa4.84□□□□□ -1.63
HMGB1P35-201ENST00000503360 CHRDQ9H2X0 955 aa4.84□□□□□ -1.63
HMGB1P35-201ENST00000503360 SEMA6CQ9H3T2 930 aa4.84□□□□□ -1.63
HMGB1P35-201ENST00000503360 VAV3Q9UKW4 847 aa4.84□□□□□ -1.63
HMGB1P35-201ENST00000503360 CYP11A1P05108 521 aa4.83□□□□□ -1.64
HMGB1P35-201ENST00000503360 MESP2Q0VG99 397 aa4.83□□□□□ -1.64
HMGB1P35-201ENST00000503360 SPRED2Q7Z698 418 aa4.83□□□□□ -1.64
HMGB1P35-201ENST00000503360 CLUAP1Q96AJ1 413 aa4.83□□□□□ -1.64
HMGB1P35-201ENST00000503360 OSMRQ99650 979 aa4.83□□□□□ -1.64
HMGB1P35-201ENST00000503360 C1GALT1Q9NS00 363 aa4.83□□□□□ -1.64
HMGB1P35-201ENST00000503360 ACTL7BQ9Y614 415 aa4.83□□□□□ -1.64
HMGB1P35-201ENST00000503360 NFICP08651 508 aa4.82□□□□□ -1.64
HMGB1P35-201ENST00000503360 ACPPP15309 386 aa4.82□□□□□ -1.64
HMGB1P35-201ENST00000503360 PRKCQQ04759 706 aa4.82□□□□□ -1.64
HMGB1P35-201ENST00000503360 NETO1Q8TDF5 533 aa4.82□□□□□ -1.64
HMGB1P35-201ENST00000503360 CLP1Q92989 425 aaKnown RBP4.82□□□□□ -1.64
HMGB1P35-201ENST00000503360 TOX2Q96NM4 488 aa4.82□□□□□ -1.64
HMGB1P35-201ENST00000503360 HHIPQ96QV1 700 aa4.82□□□□□ -1.64
HMGB1P35-201ENST00000503360 ZKSCAN3Q9BRR0 538 aa4.82□□□□□ -1.64
HMGB1P35-201ENST00000503360 LRRC4CQ9HCJ2 640 aa4.82□□□□□ -1.64
HMGB1P35-201ENST00000503360 ZMIZ1Q9ULJ6 1067 aa4.82□□□□□ -1.64
HMGB1P35-201ENST00000503360 MZF1P28698 734 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P35-201ENST00000503360 FLAD1Q8NFF5 587 aa4.81□□□□□ -1.64
HMGB1P35-201ENST00000503360 RC3H2Q9HBD1 1191 aaKnown RBP4.81□□□□□ -1.64
HMGB1P35-201ENST00000503360 MBNL3Q9NUK0 354 aaKnown RBP4.81□□□□□ -1.64
HMGB1P35-201ENST00000503360 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P35-201ENST00000503360 TSPAN15O95858 294 aa4.8□□□□□ -1.64
HMGB1P35-201ENST00000503360 RNASE1P07998 156 aaKnown RBP4.8□□□□□ -1.64
HMGB1P35-201ENST00000503360 GSTM4Q03013 218 aa4.8□□□□□ -1.64
HMGB1P35-201ENST00000503360 NAA30Q147X3 362 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P35-201ENST00000503360 ZNF574Q6ZN55 896 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P35-201ENST00000503360 CAPN12Q6ZSI9 719 aa4.8□□□□□ -1.64
HMGB1P35-201ENST00000503360 TTC16Q8NEE8 873 aa4.8□□□□□ -1.64
HMGB1P35-201ENST00000503360 PPP1R16BQ96T49 567 aa4.8□□□□□ -1.64
HMGB1P35-201ENST00000503360 NCANO14594 1321 aa4.79□□□□□ -1.64
HMGB1P35-201ENST00000503360 TRPA1O75762 1119 aa4.79□□□□□ -1.64
HMGB1P35-201ENST00000503360 PDGFAP04085 211 aa4.79□□□□□ -1.64
HMGB1P35-201ENST00000503360 EHHADHQ08426 723 aa4.79□□□□□ -1.64
HMGB1P35-201ENST00000503360 SLC23A3Q6PIS1 610 aa4.79□□□□□ -1.64
HMGB1P35-201ENST00000503360 DDX54Q8TDD1 881 aaKnown RBP4.79□□□□□ -1.64
HMGB1P35-201ENST00000503360 SNX29Q8TEQ0 813 aa4.79□□□□□ -1.64
HMGB1P35-201ENST00000503360 CLEC4MQ9H2X3 399 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P35-201ENST00000503360 GGNBP2Q9H3C7 697 aa4.79□□□□□ -1.64
HMGB1P35-201ENST00000503360 FAM105AQ9NUU6 356 aa4.79□□□□□ -1.64
HMGB1P35-201ENST00000503360 PRRG2O14669 202 aa4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 ATG7O95352 703 aa4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 CD8BP10966 210 aa4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 ASPAP45381 313 aa4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 USP5P45974 858 aa4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 NOM1Q5C9Z4 860 aaKnown RBP4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 ALKBH2Q6NS38 261 aa4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 LILRA6Q6PI73 481 aa4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 ZSCAN18Q8TBC5 510 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 PI4K2BQ8TCG2 481 aa4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 HELQQ8TDG4 1101 aa4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 MKNK1Q9BUB5 465 aa4.78□□□□□ -1.64
HMGB1P35-201ENST00000503360 EREGO14944 169 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 PHACTR2O75167 634 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 TNFRSF21O75509 655 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 RAB6AP20340 208 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 MAOBP27338 520 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 RAP1GAPP47736 663 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 SRPK2P78362 688 aaKnown RBP4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 PCDH1Q08174 1060 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 POU4F3Q15319 338 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 IFI16Q16666 785 aaKnown RBP4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 PEAR1Q5VY43 1037 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 DYMQ7RTS9 669 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 C1QL4Q86Z23 238 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 LRRN4CLQ8ND94 238 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 EDEM1Q92611 657 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 ADAMTS6Q9UKP5 1117 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 SNX11Q9Y5W9 270 aa4.77□□□□□ -1.65
HMGB1P35-201ENST00000503360 TMEM265A0A087WTH1 108 aa4.76□□□□□ -1.65
HMGB1P35-201ENST00000503360 ARID3CA6NKF2 412 aa4.76□□□□□ -1.65
HMGB1P35-201ENST00000503360 DNM1Q05193 864 aaKnown RBP4.76□□□□□ -1.65
HMGB1P35-201ENST00000503360 ATCAYQ86WG3 371 aa4.76□□□□□ -1.65
HMGB1P35-201ENST00000503360 AMIGO3Q86WK7 504 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms