RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 PUS3Q9BZE2 481 aaKnown RBP18.59■□□□□ 0.57
SEC61A1-207ENST00000498837 MYH13Q9UKX3 1938 aa18.59■□□□□ 0.57
SEC61A1-207ENST00000498837 TCP10L2B9ZVM9 353 aa18.58■□□□□ 0.56
SEC61A1-207ENST00000498837 HIBADHP31937 336 aaKnown RBP18.58■□□□□ 0.56
SEC61A1-207ENST00000498837 TNFAIP1Q13829 316 aa18.58■□□□□ 0.56
SEC61A1-207ENST00000498837 UBE4AQ14139 1066 aa18.58■□□□□ 0.56
SEC61A1-207ENST00000498837 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
SEC61A1-207ENST00000498837 DZIP1LQ8IYY4 767 aaKnown RBP18.58■□□□□ 0.56
SEC61A1-207ENST00000498837 ARMC5Q96C12 935 aa18.58■□□□□ 0.56
SEC61A1-207ENST00000498837 SERPINA10Q9UK55 444 aa18.58■□□□□ 0.56
SEC61A1-207ENST00000498837 GRIK5Q16478 980 aa18.57■□□□□ 0.56
SEC61A1-207ENST00000498837 HABP4Q5JVS0 413 aaKnown RBP18.57■□□□□ 0.56
SEC61A1-207ENST00000498837 WDR63Q8IWG1 891 aa18.57■□□□□ 0.56
SEC61A1-207ENST00000498837 BRI3BPQ8WY22 251 aa18.57■□□□□ 0.56
SEC61A1-207ENST00000498837 TMEM39BQ9GZU3 492 aa18.57■□□□□ 0.56
SEC61A1-207ENST00000498837 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
SEC61A1-207ENST00000498837 C9orf78Q9NZ63 289 aaPredicted RBP18.57■□□□□ 0.56
SEC61A1-207ENST00000498837 CRKP46108 304 aa18.56■□□□□ 0.56
SEC61A1-207ENST00000498837 CCL15-CCL14A0A0B4J2E2 113 aa18.55■□□□□ 0.56
SEC61A1-207ENST00000498837 VGLL4Q14135 290 aa18.55■□□□□ 0.56
SEC61A1-207ENST00000498837 TAF1CQ15572 869 aaPredicted RBP18.55■□□□□ 0.56
SEC61A1-207ENST00000498837 CCL15Q16663 113 aa18.55■□□□□ 0.56
SEC61A1-207ENST00000498837 KAZALD1Q96I82 304 aa18.55■□□□□ 0.56
SEC61A1-207ENST00000498837 SUCLG2Q96I99 432 aa18.55■□□□□ 0.56
SEC61A1-207ENST00000498837 IQSEC3Q9UPP2 1182 aaPredicted RBP18.55■□□□□ 0.56
SEC61A1-207ENST00000498837 MAP3K9P80192 1104 aa18.54■□□□□ 0.56
SEC61A1-207ENST00000498837 SLC4A10Q6U841 1118 aa18.54■□□□□ 0.56
SEC61A1-207ENST00000498837 FAM43AQ8N2R8 423 aa18.54■□□□□ 0.56
SEC61A1-207ENST00000498837 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.54■□□□□ 0.564e-6■□□□□ 9.2
SEC61A1-207ENST00000498837 RIPOR2Q9Y4F9 1068 aa18.54■□□□□ 0.56
SEC61A1-207ENST00000498837 PTCH2Q9Y6C5 1203 aa18.54■□□□□ 0.56
SEC61A1-207ENST00000498837 ALDH1L1O75891 902 aa18.53■□□□□ 0.56
SEC61A1-207ENST00000498837 TNNI2P48788 182 aa18.53■□□□□ 0.56
SEC61A1-207ENST00000498837 GTF2A2P52657 109 aa18.53■□□□□ 0.56
SEC61A1-207ENST00000498837 CACNB3P54284 484 aa18.53■□□□□ 0.56
SEC61A1-207ENST00000498837 OTUD5Q96G74 571 aa18.53■□□□□ 0.56
SEC61A1-207ENST00000498837 ZNF333Q96JL9 665 aa18.53■□□□□ 0.56
SEC61A1-207ENST00000498837 TMEM106CQ9BVX2 250 aa18.53■□□□□ 0.56
SEC61A1-207ENST00000498837 SRCIN1Q9C0H9 1055 aa18.53■□□□□ 0.56
SEC61A1-207ENST00000498837 ZFYVE28Q9HCC9 887 aa18.53■□□□□ 0.56
SEC61A1-207ENST00000498837 CHAF1AQ13111 956 aaPredicted RBP18.52■□□□□ 0.56
SEC61A1-207ENST00000498837 FBXO33Q7Z6M2 555 aa18.52■□□□□ 0.56
SEC61A1-207ENST00000498837 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
SEC61A1-207ENST00000498837 CSADQ9Y600 493 aa18.52■□□□□ 0.56
SEC61A1-207ENST00000498837 NBPF7P0C2Y1 421 aaPredicted RBP18.51■□□□□ 0.55
SEC61A1-207ENST00000498837 SLC9C1Q4G0N8 1177 aa18.51■□□□□ 0.55
SEC61A1-207ENST00000498837 MROH5Q6ZUA9 1318 aa18.5■□□□□ 0.55
SEC61A1-207ENST00000498837 LRRC24Q50LG9 513 aa18.5■□□□□ 0.55
SEC61A1-207ENST00000498837 VPS37DQ86XT2 251 aa18.5■□□□□ 0.55
SEC61A1-207ENST00000498837 ARHGAP39Q9C0H5 1083 aa18.5■□□□□ 0.55
SEC61A1-207ENST00000498837 SNCAIPQ9Y6H5 919 aa18.5■□□□□ 0.55
SEC61A1-207ENST00000498837 TRIOBPQ9H2D6 2365 aa18.5■□□□□ 0.55
SEC61A1-207ENST00000498837 SPDYE5A6NIY4 337 aa18.49■□□□□ 0.55
SEC61A1-207ENST00000498837 MYCP01106 439 aaPredicted RBP18.49■□□□□ 0.55
SEC61A1-207ENST00000498837 HDLBPQ00341 1268 aaKnown RBP18.49■□□□□ 0.55
SEC61A1-207ENST00000498837 ARHGEF6Q15052 776 aa18.49■□□□□ 0.55
SEC61A1-207ENST00000498837 NBPF11Q86T75 865 aa18.49■□□□□ 0.55
SEC61A1-207ENST00000498837 ZKSCAN4Q969J2 545 aaPredicted RBP18.49■□□□□ 0.55
SEC61A1-207ENST00000498837 BICC1Q9H694 974 aaKnown RBP18.49■□□□□ 0.55
SEC61A1-207ENST00000498837 MGAMO43451 1857 aa18.49■□□□□ 0.55
SEC61A1-207ENST00000498837 FRAT2O75474 233 aaPredicted RBP18.48■□□□□ 0.55
SEC61A1-207ENST00000498837 TBC1D22AQ8WUA7 517 aa18.48■□□□□ 0.55
SEC61A1-207ENST00000498837 TEKT1Q969V4 418 aa18.48■□□□□ 0.55
SEC61A1-207ENST00000498837 UTYO14607 1347 aa18.48■□□□□ 0.55
SEC61A1-207ENST00000498837 BTBD19C9JJ37 291 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 IRF6O14896 467 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 TLR2O60603 784 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 CETPP11597 493 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 BCAMP50895 628 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 SLC4A8Q2Y0W8 1093 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 CAVIN4Q5BKX8 364 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 METTL24Q5JXM2 366 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 ERO1BQ86YB8 467 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 VGLL2Q8N8G2 317 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 SH3TC2Q8TF17 1288 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 WRNIP1Q96S55 665 aa18.47■□□□□ 0.55
SEC61A1-207ENST00000498837 FXR1P51114 621 aaKnown RBP eCLIP18.46■□□□□ 0.55
SEC61A1-207ENST00000498837 RABL6Q3YEC7 729 aaPredicted RBP18.46■□□□□ 0.55
SEC61A1-207ENST00000498837 APOBEC3HQ6NTF7 200 aaKnown RBP18.46■□□□□ 0.55
SEC61A1-207ENST00000498837 ANKRD44Q8N8A2 993 aa18.46■□□□□ 0.55
SEC61A1-207ENST00000498837 KLHDC4Q8TBB5 520 aa18.46■□□□□ 0.55
SEC61A1-207ENST00000498837 ZDHHC15Q96MV8 337 aa18.46■□□□□ 0.55
SEC61A1-207ENST00000498837 ECM2O94769 699 aaPredicted RBP18.45■□□□□ 0.54
SEC61A1-207ENST00000498837 PDE8BO95263 885 aa18.45■□□□□ 0.54
SEC61A1-207ENST00000498837 LACTBP83111 547 aaPredicted RBP18.45■□□□□ 0.54
SEC61A1-207ENST00000498837 FAM83AQ86UY5 434 aa18.45■□□□□ 0.54
SEC61A1-207ENST00000498837 MRIQ9BWK5 157 aa18.45■□□□□ 0.54
SEC61A1-207ENST00000498837 TMOD2Q9NZR1 351 aa18.45■□□□□ 0.54
SEC61A1-207ENST00000498837 WDHD1O75717 1129 aaPredicted RBP18.44■□□□□ 0.54
SEC61A1-207ENST00000498837 PPIL2Q13356 520 aa18.44■□□□□ 0.54
SEC61A1-207ENST00000498837 SNAPC2Q13487 334 aa18.44■□□□□ 0.54
SEC61A1-207ENST00000498837 KIF22Q14807 665 aa18.44■□□□□ 0.54
SEC61A1-207ENST00000498837 MIGA2Q7L4E1 593 aa18.44■□□□□ 0.54
SEC61A1-207ENST00000498837 ZCCHC17Q9NP64 241 aaKnown RBP18.44■□□□□ 0.54
SEC61A1-207ENST00000498837 COLQQ9Y215 455 aaPredicted RBP18.44■□□□□ 0.54
SEC61A1-207ENST00000498837 MYH2Q9UKX2 1941 aa18.44■□□□□ 0.54
SEC61A1-207ENST00000498837 FKBP1CQ5VVH2 108 aa18.43■□□□□ 0.54
SEC61A1-207ENST00000498837 DOCK3Q8IZD9 2030 aa18.43■□□□□ 0.54
SEC61A1-207ENST00000498837 CTGFP29279 349 aa18.42■□□□□ 0.54
SEC61A1-207ENST00000498837 INPP5BP32019 993 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms