RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 CHAF1AQ13111 956 aaPredicted RBP32.47■■■□□ 2.79
CUL4A-211ENST00000498562 TRMT2AQ8IZ69 625 aaKnown RBP32.47■■■□□ 2.79
CUL4A-211ENST00000498562 RFX5P48382 616 aaPredicted RBP32.46■■■□□ 2.79
CUL4A-211ENST00000498562 PKN2Q16513 984 aaKnown RBP32.46■■■□□ 2.79
CUL4A-211ENST00000498562 TBC1D22AQ8WUA7 517 aa32.46■■■□□ 2.79
CUL4A-211ENST00000498562 MYH13Q9UKX3 1938 aa32.45■■■□□ 2.79
CUL4A-211ENST00000498562 ALDH1A1P00352 501 aa32.45■■■□□ 2.79
CUL4A-211ENST00000498562 FGFR2P21802 821 aa32.45■■■□□ 2.79
CUL4A-211ENST00000498562 BCAMP50895 628 aa32.45■■■□□ 2.79
CUL4A-211ENST00000498562 INHBEP58166 350 aa32.45■■■□□ 2.79
CUL4A-211ENST00000498562 IFNL1Q8IU54 200 aa32.45■■■□□ 2.79
CUL4A-211ENST00000498562 CDAN1Q8IWY9 1227 aa32.45■■■□□ 2.79
CUL4A-211ENST00000498562 TEPSINQ96N21 525 aa32.45■■■□□ 2.79
CUL4A-211ENST00000498562 HPS5Q9UPZ3 1129 aa32.45■■■□□ 2.79
CUL4A-211ENST00000498562 KIF16BQ96L93 1317 aa32.45■■■□□ 2.78
CUL4A-211ENST00000498562 FRAT2O75474 233 aaPredicted RBP32.44■■■□□ 2.78
CUL4A-211ENST00000498562 GJA5P36382 358 aa32.44■■■□□ 2.78
CUL4A-211ENST00000498562 SOX10P56693 466 aa32.44■■■□□ 2.78
CUL4A-211ENST00000498562 PUM3Q15397 648 aaKnown RBP32.44■■■□□ 2.78
CUL4A-211ENST00000498562 ANKRD13AQ8IZ07 590 aa32.44■■■□□ 2.78
CUL4A-211ENST00000498562 TNRC18O15417 2968 aaPredicted RBP32.43■■■□□ 2.78
CUL4A-211ENST00000498562 TCP10L2B9ZVM9 353 aa32.43■■■□□ 2.78
CUL4A-211ENST00000498562 HDLBPQ00341 1268 aaKnown RBP32.43■■■□□ 2.78
CUL4A-211ENST00000498562 EYA2O00167 538 aa32.42■■■□□ 2.78
CUL4A-211ENST00000498562 IGF2BP3O00425 579 aaKnown RBP eCLIP32.42■■■□□ 2.78
CUL4A-211ENST00000498562 FKTNO75072 461 aa32.42■■■□□ 2.78
CUL4A-211ENST00000498562 IFIT1P09914 478 aaKnown RBP32.41■■■□□ 2.78
CUL4A-211ENST00000498562 TMEM39BQ9GZU3 492 aa32.41■■■□□ 2.78
CUL4A-211ENST00000498562 CT47B1P0C2W7 299 aaPredicted RBP32.4■■■□□ 2.78
CUL4A-211ENST00000498562 TNNI2P48788 182 aa32.39■■■□□ 2.78
CUL4A-211ENST00000498562 TEKT1Q969V4 418 aa32.39■■■□□ 2.78
CUL4A-211ENST00000498562 ATG9AQ7Z3C6 839 aa32.38■■■□□ 2.77
CUL4A-211ENST00000498562 UBTFL1P0CB47 393 aaPredicted RBP32.37■■■□□ 2.77
CUL4A-211ENST00000498562 LPIN2Q92539 896 aa32.37■■■□□ 2.77
CUL4A-211ENST00000498562 ELP3Q9H9T3 547 aa32.37■■■□□ 2.77
CUL4A-211ENST00000498562 NOB1Q9ULX3 412 aaKnown RBP32.37■■■□□ 2.77
CUL4A-211ENST00000498562 SUGT1Q9Y2Z0 365 aa32.37■■■□□ 2.77
CUL4A-211ENST00000498562 MAST3O60307 1309 aa32.36■■■□□ 2.77
CUL4A-211ENST00000498562 SLC5A1P13866 664 aa32.36■■■□□ 2.77
CUL4A-211ENST00000498562 FBXO46Q6PJ61 603 aaPredicted RBP32.36■■■□□ 2.77
CUL4A-211ENST00000498562 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.36■■■□□ 2.77
CUL4A-211ENST00000498562 ZDHHC15Q96MV8 337 aa32.36■■■□□ 2.77
CUL4A-211ENST00000498562 MRIQ9BWK5 157 aa32.36■■■□□ 2.77
CUL4A-211ENST00000498562 CACNB3P54284 484 aa32.35■■■□□ 2.77
CUL4A-211ENST00000498562 OPTNQ96CV9 577 aa32.35■■■□□ 2.77
CUL4A-211ENST00000498562 TESPA1A2RU30 521 aaPredicted RBP32.34■■■□□ 2.77
CUL4A-211ENST00000498562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.34■■■□□ 2.77
CUL4A-211ENST00000498562 APOBEC3HQ6NTF7 200 aaKnown RBP32.33■■■□□ 2.77
CUL4A-211ENST00000498562 PTPN18Q99952 460 aa32.33■■■□□ 2.77
CUL4A-211ENST00000498562 SIL1Q9H173 461 aa32.33■■■□□ 2.77
CUL4A-211ENST00000498562 FBXO3Q9UK99 471 aa32.33■■■□□ 2.77
CUL4A-211ENST00000498562 VGLL4Q14135 290 aa32.32■■■□□ 2.76
CUL4A-211ENST00000498562 MS4A4AQ96JQ5 239 aa32.32■■■□□ 2.76
CUL4A-211ENST00000498562 API5Q9BZZ5 524 aaKnown RBP32.32■■■□□ 2.76
CUL4A-211ENST00000498562 HTTP42858 3142 aa32.31■■■□□ 2.76
CUL4A-211ENST00000498562 CIAO1O76071 339 aa32.31■■■□□ 2.76
CUL4A-211ENST00000498562 CRHR2Q13324 411 aa32.31■■■□□ 2.76
CUL4A-211ENST00000498562 OTUD7BQ6GQQ9 843 aa32.31■■■□□ 2.76
CUL4A-211ENST00000498562 HHIPL2Q6UWX4 724 aa32.31■■■□□ 2.76
CUL4A-211ENST00000498562 CNKSR2Q8WXI2 1034 aa32.31■■■□□ 2.76
CUL4A-211ENST00000498562 TMOD2Q9NZR1 351 aa32.31■■■□□ 2.76
CUL4A-211ENST00000498562 CCER2I3L3R5 266 aa32.3■■■□□ 2.76
CUL4A-211ENST00000498562 MAP3K9P80192 1104 aa32.3■■■□□ 2.76
CUL4A-211ENST00000498562 FKBP1CQ5VVH2 108 aa32.3■■■□□ 2.76
CUL4A-211ENST00000498562 FAM83AQ86UY5 434 aa32.3■■■□□ 2.76
CUL4A-211ENST00000498562 WDR66Q8TBY9 1149 aa32.3■■■□□ 2.76
CUL4A-211ENST00000498562 LRRFIP2Q9Y608 721 aaKnown RBP32.3■■■□□ 2.76
CUL4A-211ENST00000498562 RPAP1Q9BWH6 1393 aaPredicted RBP32.3■■■□□ 2.76
CUL4A-211ENST00000498562 ATP2B3Q16720 1220 aa32.28■■■□□ 2.76
CUL4A-211ENST00000498562 CSADQ9Y600 493 aa32.28■■■□□ 2.76
CUL4A-211ENST00000498562 RARSP54136 660 aaKnown RBP32.27■■■□□ 2.76
CUL4A-211ENST00000498562 OTOP1Q7RTM1 612 aa32.27■■■□□ 2.76
CUL4A-211ENST00000498562 MEIS3Q99687 375 aa32.27■■■□□ 2.76
CUL4A-211ENST00000498562 CEP126Q9P2H0 1117 aa32.27■■■□□ 2.76
CUL4A-211ENST00000498562 TRIM17Q9Y577 477 aa32.27■■■□□ 2.76
CUL4A-211ENST00000498562 BRI3BPQ8WY22 251 aa32.26■■■□□ 2.75
CUL4A-211ENST00000498562 PA2G4Q9UQ80 394 aaKnown RBP32.26■■■□□ 2.75
CUL4A-211ENST00000498562 OTUD5Q96G74 571 aa32.25■■■□□ 2.75
CUL4A-211ENST00000498562 HDAC5Q9UQL6 1122 aa32.25■■■□□ 2.75
CUL4A-211ENST00000498562 SNCAIPQ9Y6H5 919 aa32.25■■■□□ 2.75
CUL4A-211ENST00000498562 SPDYE5A6NIY4 337 aa32.24■■■□□ 2.75
CUL4A-211ENST00000498562 PRDX5P30044 214 aa32.24■■■□□ 2.75
CUL4A-211ENST00000498562 IL15P40933 162 aaPredicted RBP32.24■■■□□ 2.75
CUL4A-211ENST00000498562 GTF2A2P52657 109 aa32.24■■■□□ 2.75
CUL4A-211ENST00000498562 ERO1AQ96HE7 468 aa32.24■■■□□ 2.75
CUL4A-211ENST00000498562 DAGLAQ9Y4D2 1042 aa32.24■■■□□ 2.75
CUL4A-211ENST00000498562 PDE4DIPQ5VU43 2346 aa32.24■■■□□ 2.75
CUL4A-211ENST00000498562 CCL15-CCL14A0A0B4J2E2 113 aa32.23■■■□□ 2.75
CUL4A-211ENST00000498562 CCL15Q16663 113 aa32.23■■■□□ 2.75
CUL4A-211ENST00000498562 CD99L2Q8TCZ2 262 aa32.23■■■□□ 2.75
CUL4A-211ENST00000498562 WRNIP1Q96S55 665 aa32.23■■■□□ 2.75
CUL4A-211ENST00000498562 DIXDC1Q155Q3 683 aa32.22■■■□□ 2.75
CUL4A-211ENST00000498562 HOOK2Q96ED9 719 aa32.22■■■□□ 2.75
CUL4A-211ENST00000498562 COPRSQ9NQ92 184 aa32.22■■■□□ 2.75
CUL4A-211ENST00000498562 SALL1Q9NSC2 1324 aa32.22■■■□□ 2.75
CUL4A-211ENST00000498562 PHKA1P46020 1223 aa32.21■■■□□ 2.75
CUL4A-211ENST00000498562 ARHGAP45Q92619 1136 aa32.21■■■□□ 2.75
CUL4A-211ENST00000498562 GNL3LQ9NVN8 582 aaKnown RBP32.21■■■□□ 2.75
CUL4A-211ENST00000498562 SP3Q02447 781 aa32.2■■■□□ 2.75
CUL4A-211ENST00000498562 INTS3Q68E01 1043 aaKnown RBP32.2■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms