RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 AIFM3Q96NN9 605 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 MINPP1Q9UNW1 487 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 HPS5Q9UPZ3 1129 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 BTAF1O14981 1849 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 PFKFB2O60825 505 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 MEX3CQ5U5Q3 659 aaKnown RBP12.28□□□□□ -0.44
SAMM50-206ENST00000494795 SDR42E1Q8WUS8 393 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
SAMM50-206ENST00000494795 ZKSCAN3Q9BRR0 538 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 MYH7P12883 1935 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 ZNF213O14771 459 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 PTMSP20962 102 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 CAMK4Q16566 473 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 IMMTQ16891 758 aaKnown RBP12.28□□□□□ -0.44
SAMM50-206ENST00000494795 LRSAM1Q6UWE0 723 aa12.28□□□□□ -0.44
SAMM50-206ENST00000494795 CYP2D7A0A087X1C5 515 aa12.27□□□□□ -0.44
SAMM50-206ENST00000494795 SLC4A8Q2Y0W8 1093 aa12.27□□□□□ -0.44
SAMM50-206ENST00000494795 FAM196AQ6ZSG2 479 aa12.27□□□□□ -0.44
SAMM50-206ENST00000494795 ZFYP08048 801 aaPredicted RBP12.27□□□□□ -0.45
SAMM50-206ENST00000494795 ILDR1Q86SU0 546 aaPredicted RBP12.27□□□□□ -0.45
SAMM50-206ENST00000494795 SEPT12Q8IYM1 358 aa12.27□□□□□ -0.45
SAMM50-206ENST00000494795 AIDAQ96BJ3 306 aa12.27□□□□□ -0.45
SAMM50-206ENST00000494795 SRCAPQ6ZRS2 3230 aa12.27□□□□□ -0.45
SAMM50-206ENST00000494795 KLF18A0A0U1RQI7 1052 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 TMEM87AQ8NBN3 555 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 SMARCC2Q8TAQ2 1214 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 ZNF512BQ96KM6 892 aaPredicted RBP12.26□□□□□ -0.45
SAMM50-206ENST00000494795 GSG1L2A8MUP6 293 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 DYNLL1P63167 89 aaKnown RBP12.26□□□□□ -0.45
SAMM50-206ENST00000494795 RESTQ13127 1097 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 NBPF5PQ86XG9 351 aaPredicted RBP12.26□□□□□ -0.45
SAMM50-206ENST00000494795 ANKRD18AQ8IVF6 992 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 PGBD1Q96JS3 809 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.26□□□□□ -0.45
SAMM50-206ENST00000494795 CASZ1Q86V15 1759 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 A0A087WWV3 80 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 RPS6KA4O75676 772 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 ADD1P35611 737 aaKnown RBP12.26□□□□□ -0.45
SAMM50-206ENST00000494795 UBE3CQ15386 1083 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 NARFQ9UHQ1 456 aa12.26□□□□□ -0.45
SAMM50-206ENST00000494795 CLEC4GQ6UXB4 293 aa12.25□□□□□ -0.45
SAMM50-206ENST00000494795 IFNL3Q8IZI9 196 aa12.25□□□□□ -0.45
SAMM50-206ENST00000494795 CMTR1Q8N1G2 835 aaKnown RBP12.25□□□□□ -0.45
SAMM50-206ENST00000494795 FAM84BQ96KN1 310 aaPredicted RBP12.25□□□□□ -0.45
SAMM50-206ENST00000494795 SETDB2Q96T68 719 aa12.25□□□□□ -0.45
SAMM50-206ENST00000494795 LRP2BPQ9P2M1 347 aa12.25□□□□□ -0.45
SAMM50-206ENST00000494795 ZNF652Q9Y2D9 606 aa12.25□□□□□ -0.45
SAMM50-206ENST00000494795 CNTNAP4Q9C0A0 1308 aa12.25□□□□□ -0.45
SAMM50-206ENST00000494795 BCORQ6W2J9 1755 aa12.25□□□□□ -0.45
SAMM50-206ENST00000494795 MBD3O95983 291 aa12.25□□□□□ -0.45
SAMM50-206ENST00000494795 TM4SF1P30408 202 aa12.25□□□□□ -0.45
SAMM50-206ENST00000494795 SALL1Q9NSC2 1324 aa12.25□□□□□ -0.45
SAMM50-206ENST00000494795 GOLGA8BA8MQT2 603 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 ZPR1O75312 459 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 UQCRFS1P1P0C7P4 283 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 CDC27P30260 824 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 UBE2HP62256 183 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 RRP12Q5JTH9 1297 aaKnown RBP12.24□□□□□ -0.45
SAMM50-206ENST00000494795 FAM184AQ8NB25 1140 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 H3BQV1 296 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 NFIXQ14938 502 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 SF3B3Q15393 1217 aaKnown RBP12.24□□□□□ -0.45
SAMM50-206ENST00000494795 IFFO2Q5TF58 517 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 PHKBQ93100 1093 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 AK7Q96M32 723 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 RTCBQ9Y3I0 505 aaKnown RBP12.24□□□□□ -0.45
SAMM50-206ENST00000494795 HMGB1P09429 215 aaKnown RBP12.24□□□□□ -0.45
SAMM50-206ENST00000494795 TTF1Q15361 905 aaPredicted RBP12.24□□□□□ -0.45
SAMM50-206ENST00000494795 NCOA7Q8NI08 942 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 LEO1Q8WVC0 666 aaPredicted RBP12.24□□□□□ -0.45
SAMM50-206ENST00000494795 ZSWIM5Q9P217 1185 aa12.24□□□□□ -0.45
SAMM50-206ENST00000494795 MCM5P33992 734 aa12.23□□□□□ -0.45
SAMM50-206ENST00000494795 ERCC4Q92889 916 aaPredicted RBP12.23□□□□□ -0.45
SAMM50-206ENST00000494795 BSDC1Q9NW68 430 aaPredicted RBP12.23□□□□□ -0.45
SAMM50-206ENST00000494795 SLC4A4Q9Y6R1 1079 aa12.23□□□□□ -0.45
SAMM50-206ENST00000494795 POLR3DP05423 398 aaPredicted RBP12.23□□□□□ -0.45
SAMM50-206ENST00000494795 CYP7A1P22680 504 aa12.23□□□□□ -0.45
SAMM50-206ENST00000494795 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
SAMM50-206ENST00000494795 GRIK5Q16478 980 aa12.23□□□□□ -0.45
SAMM50-206ENST00000494795 MICU3Q86XE3 530 aa12.23□□□□□ -0.45
SAMM50-206ENST00000494795 CKAP2LQ8IYA6 745 aa12.23□□□□□ -0.45
SAMM50-206ENST00000494795 CCDC82Q8N4S0 544 aa12.23□□□□□ -0.45
SAMM50-206ENST00000494795 RAI14Q9P0K7 980 aa12.23□□□□□ -0.45
SAMM50-206ENST00000494795 CTNNA3Q9UI47 895 aa12.23□□□□□ -0.45
SAMM50-206ENST00000494795 CARMIL3Q8ND23 1372 aa12.23□□□□□ -0.45
SAMM50-206ENST00000494795 PRDM1O75626 825 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 TRIM37O94972 964 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 PRDX5P30044 214 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 MAP3K12Q12852 859 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
SAMM50-206ENST00000494795 SPATA32Q96LK8 384 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 CDC5LQ99459 802 aaKnown RBP12.22□□□□□ -0.45
SAMM50-206ENST00000494795 LAMB2P55268 1798 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 KIF28PB7ZC32 967 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 NR1I2O75469 434 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 RPS8P62241 208 aaKnown RBP12.22□□□□□ -0.45
SAMM50-206ENST00000494795 KRT85P78386 507 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 CHAF1AQ13111 956 aaPredicted RBP12.22□□□□□ -0.45
SAMM50-206ENST00000494795 CHMP4CQ96CF2 233 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms