RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CRKP46108 304 aa11.98□□□□□ -0.49
MSH5-218ENST00000494646 RASA3Q14644 834 aa11.98□□□□□ -0.49
MSH5-218ENST00000494646 PUM3Q15397 648 aaKnown RBP11.98□□□□□ -0.49
MSH5-218ENST00000494646 DZIP1LQ8IYY4 767 aaKnown RBP11.98□□□□□ -0.49
MSH5-218ENST00000494646 ZNF70Q9UC06 446 aaPredicted RBP11.98□□□□□ -0.49
MSH5-218ENST00000494646 TCP10L2B9ZVM9 353 aa11.97□□□□□ -0.49
MSH5-218ENST00000494646 SLC5A1P13866 664 aa11.97□□□□□ -0.49
MSH5-218ENST00000494646 DGKZQ13574 1117 aa11.97□□□□□ -0.49
MSH5-218ENST00000494646 SUPT20HL1Q3ZLR7 823 aa11.97□□□□□ -0.49
MSH5-218ENST00000494646 ARHGAP45Q92619 1136 aa11.97□□□□□ -0.49
MSH5-218ENST00000494646 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
MSH5-218ENST00000494646 SLC10A4Q96EP9 437 aa11.97□□□□□ -0.49
MSH5-218ENST00000494646 CEP126Q9P2H0 1117 aa11.97□□□□□ -0.49
MSH5-218ENST00000494646 SERPINA10Q9UK55 444 aa11.97□□□□□ -0.49
MSH5-218ENST00000494646 AK9Q5TCS8 1911 aa11.96□□□□□ -0.49
MSH5-218ENST00000494646 CCDC85CA6NKD9 419 aa11.96□□□□□ -0.49
MSH5-218ENST00000494646 IPO8O15397 1037 aaKnown RBP11.96□□□□□ -0.49
MSH5-218ENST00000494646 PPP1R12BO60237 982 aaPredicted RBP11.96□□□□□ -0.49
MSH5-218ENST00000494646 USP2O75604 605 aaPredicted RBP11.96□□□□□ -0.49
MSH5-218ENST00000494646 TBC1D8O95759 1140 aa11.96□□□□□ -0.49
MSH5-218ENST00000494646 LDLRAD1Q5T700 205 aa11.96□□□□□ -0.49
MSH5-218ENST00000494646 INTS3Q68E01 1043 aaKnown RBP11.96□□□□□ -0.49
MSH5-218ENST00000494646 TBC1D22AQ8WUA7 517 aa11.96□□□□□ -0.49
MSH5-218ENST00000494646 LPIN2Q92539 896 aa11.96□□□□□ -0.49
MSH5-218ENST00000494646 MCOLN1Q9GZU1 580 aa11.96□□□□□ -0.49
MSH5-218ENST00000494646 HDAC5Q9UQL6 1122 aa11.96□□□□□ -0.49
MSH5-218ENST00000494646 IL15P40933 162 aaPredicted RBP11.95□□□□□ -0.5
MSH5-218ENST00000494646 TM4SF4P48230 202 aa11.95□□□□□ -0.5
MSH5-218ENST00000494646 CACNB3P54284 484 aa11.95□□□□□ -0.5
MSH5-218ENST00000494646 TIMM10P62072 90 aa11.95□□□□□ -0.5
MSH5-218ENST00000494646 ATP2B3Q16720 1220 aa11.95□□□□□ -0.5
MSH5-218ENST00000494646 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
MSH5-218ENST00000494646 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
MSH5-218ENST00000494646 REM2Q8IYK8 340 aaPredicted RBP11.95□□□□□ -0.5
MSH5-218ENST00000494646 CLMNQ96JQ2 1002 aa11.95□□□□□ -0.5
MSH5-218ENST00000494646 SAGE1Q9NXZ1 904 aa11.95□□□□□ -0.5
MSH5-218ENST00000494646 PPP2R3BQ9Y5P8 575 aa11.95□□□□□ -0.5
MSH5-218ENST00000494646 KIF16BQ96L93 1317 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 SRGAP3O43295 1099 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 CIAO1O76071 339 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 GNAI3P08754 354 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 TRIM27P14373 513 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 SPRYD7Q5W111 196 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 ATF7IPQ6VMQ6 1270 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 TEKT1Q969V4 418 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 TMEM39BQ9GZU3 492 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 COPRSQ9NQ92 184 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 ARAP2Q8WZ64 1704 aa11.94□□□□□ -0.5
MSH5-218ENST00000494646 SSC5DA1L4H1 1573 aa11.93□□□□□ -0.5
MSH5-218ENST00000494646 ADORA1P30542 326 aa11.93□□□□□ -0.5
MSH5-218ENST00000494646 TNNI2P48788 182 aa11.93□□□□□ -0.5
MSH5-218ENST00000494646 HDLBPQ00341 1268 aaKnown RBP11.93□□□□□ -0.5
MSH5-218ENST00000494646 MAP3K11Q16584 847 aa11.93□□□□□ -0.5
MSH5-218ENST00000494646 WDR66Q8TBY9 1149 aa11.93□□□□□ -0.5
MSH5-218ENST00000494646 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
MSH5-218ENST00000494646 COL1A1P02452 1464 aaPredicted RBP11.93□□□□□ -0.5
MSH5-218ENST00000494646 GNAI2P04899 355 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 PHKA1P46020 1223 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 IREB2P48200 963 aaKnown RBP11.92□□□□□ -0.5
MSH5-218ENST00000494646 TFCP2Q12800 502 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 TNFAIP1Q13829 316 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 ZKSCAN2Q63HK3 967 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 APOBEC3HQ6NTF7 200 aaKnown RBP11.92□□□□□ -0.5
MSH5-218ENST00000494646 TMEM57Q8N5G2 664 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 ZDHHC15Q96MV8 337 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 TEPSINQ96N21 525 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 NEUROD6Q96NK8 337 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 MRIQ9BWK5 157 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 R3HDMLQ9H3Y0 253 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 ELP3Q9H9T3 547 aa11.92□□□□□ -0.5
MSH5-218ENST00000494646 GNL3LQ9NVN8 582 aaKnown RBP11.92□□□□□ -0.5
MSH5-218ENST00000494646 SREBF2Q12772 1141 aa11.91□□□□□ -0.5
MSH5-218ENST00000494646 ANKRD13AQ8IZ07 590 aa11.91□□□□□ -0.5
MSH5-218ENST00000494646 WNK4Q96J92 1243 aa11.91□□□□□ -0.5
MSH5-218ENST00000494646 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.91□□□□□ -0.5
MSH5-218ENST00000494646 MYH2Q9UKX2 1941 aa11.91□□□□□ -0.5
MSH5-218ENST00000494646 PNMA6EA0A0J9YXQ4 647 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 MANSC4A6NHS7 340 aaPredicted RBP11.9□□□□□ -0.5
MSH5-218ENST00000494646 PRDX5P30044 214 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 GJA5P36382 358 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 MAP3K9P80192 1104 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 DIXDC1Q155Q3 683 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 CCDC102BQ68D86 513 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 HHIPL2Q6UWX4 724 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 ZNF296Q8WUU4 475 aaPredicted RBP11.9□□□□□ -0.5
MSH5-218ENST00000494646 XAGE2Q96GT9 111 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 TMOD2Q9NZR1 351 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 DENND2AQ9ULE3 1009 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 SUGT1Q9Y2Z0 365 aa11.9□□□□□ -0.5
MSH5-218ENST00000494646 A0A1B0GUL7 405 aa11.89□□□□□ -0.51
MSH5-218ENST00000494646 GPR25O00155 361 aa11.89□□□□□ -0.51
MSH5-218ENST00000494646 LDHBP07195 334 aaKnown RBP11.89□□□□□ -0.51
MSH5-218ENST00000494646 ZBTB48P10074 688 aaPredicted RBP11.89□□□□□ -0.51
MSH5-218ENST00000494646 INHBEP58166 350 aa11.89□□□□□ -0.51
MSH5-218ENST00000494646 TCP10Q12799 353 aa11.89□□□□□ -0.51
MSH5-218ENST00000494646 G3BP1Q13283 466 aaKnown RBP eCLIP11.89□□□□□ -0.51
MSH5-218ENST00000494646 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.89□□□□□ -0.51
MSH5-218ENST00000494646 MIGA2Q7L4E1 593 aa11.89□□□□□ -0.51
MSH5-218ENST00000494646 IFNL1Q8IU54 200 aa11.89□□□□□ -0.51
MSH5-218ENST00000494646 OPTNQ96CV9 577 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms