RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 TFCP2Q12800 502 aa12.88□□□□□ -0.35
TRAPPC12-222ENST00000493792 PDE3AQ14432 1141 aa12.88□□□□□ -0.35
TRAPPC12-222ENST00000493792 FBXO46Q6PJ61 603 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-222ENST00000493792 KIAA0825Q8IV33 1275 aa12.88□□□□□ -0.35
TRAPPC12-222ENST00000493792 LPIN2Q92539 896 aa12.88□□□□□ -0.35
TRAPPC12-222ENST00000493792 GCC1Q96CN9 775 aa12.88□□□□□ -0.35
TRAPPC12-222ENST00000493792 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
TRAPPC12-222ENST00000493792 F8W031 263 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-222ENST00000493792 SURF6O75683 361 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-222ENST00000493792 BCAMP50895 628 aa12.87□□□□□ -0.35
TRAPPC12-222ENST00000493792 MYOZ2Q9NPC6 264 aa12.87□□□□□ -0.35
TRAPPC12-222ENST00000493792 SCAF8Q9UPN6 1271 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-222ENST00000493792 SASH1O94885 1247 aa12.86□□□□□ -0.35
TRAPPC12-222ENST00000493792 FGFR2P21802 821 aa12.86□□□□□ -0.35
TRAPPC12-222ENST00000493792 PRAMEF18Q5VWM3 479 aa12.86□□□□□ -0.35
TRAPPC12-222ENST00000493792 TDRD7Q8NHU6 1098 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-222ENST00000493792 NEUROD6Q96NK8 337 aa12.86□□□□□ -0.35
TRAPPC12-222ENST00000493792 CFHR5Q9BXR6 569 aa12.86□□□□□ -0.35
TRAPPC12-222ENST00000493792 AKAP2Q9Y2D5 859 aa12.86□□□□□ -0.35
TRAPPC12-222ENST00000493792 MMP14P50281 582 aa12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 RRP1P56182 461 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 POLA2Q14181 598 aa12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 MFSD14BQ5SR56 506 aa12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 GORABQ5T7V8 394 aa12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 CEP85Q6P2H3 762 aa12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 FBXO33Q7Z6M2 555 aa12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 SSH3Q8TE77 659 aa12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 BCL11AQ9H165 835 aa12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 GNL3LQ9NVN8 582 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 PITPNM2Q9BZ72 1349 aa12.85□□□□□ -0.35
TRAPPC12-222ENST00000493792 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
TRAPPC12-222ENST00000493792 ADORA1P30542 326 aa12.84□□□□□ -0.35
TRAPPC12-222ENST00000493792 RBM5P52756 815 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAPPC12-222ENST00000493792 TIMM10P62072 90 aa12.84□□□□□ -0.35
TRAPPC12-222ENST00000493792 CERS5Q8N5B7 392 aa12.84□□□□□ -0.35
TRAPPC12-222ENST00000493792 FAM205AQ6ZU69 1335 aa12.84□□□□□ -0.35
TRAPPC12-222ENST00000493792 HTTP42858 3142 aa12.84□□□□□ -0.35
TRAPPC12-222ENST00000493792 A0A1B0GUL7 405 aa12.83□□□□□ -0.36
TRAPPC12-222ENST00000493792 APBB1O00213 710 aa12.83□□□□□ -0.36
TRAPPC12-222ENST00000493792 FKTNO75072 461 aa12.83□□□□□ -0.36
TRAPPC12-222ENST00000493792 HMMRO75330 724 aa12.83□□□□□ -0.36
TRAPPC12-222ENST00000493792 FXR1P51114 621 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAPPC12-222ENST00000493792 NBPF9Q3BBW0 867 aa12.83□□□□□ -0.36
TRAPPC12-222ENST00000493792 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
TRAPPC12-222ENST00000493792 EXOC6BQ9Y2D4 811 aa12.83□□□□□ -0.36
TRAPPC12-222ENST00000493792 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-222ENST00000493792 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
TRAPPC12-222ENST00000493792 PHKA1P46020 1223 aa12.82□□□□□ -0.36
TRAPPC12-222ENST00000493792 FKBP1AP62942 108 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-222ENST00000493792 DLGAP5Q15398 846 aa12.82□□□□□ -0.36
TRAPPC12-222ENST00000493792 CCDC102BQ68D86 513 aa12.82□□□□□ -0.36
TRAPPC12-222ENST00000493792 RPAP2Q8IXW5 612 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-222ENST00000493792 TBC1D22AQ8WUA7 517 aa12.82□□□□□ -0.36
TRAPPC12-222ENST00000493792 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
TRAPPC12-222ENST00000493792 TTF2Q9UNY4 1162 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-222ENST00000493792 MYH13Q9UKX3 1938 aa12.82□□□□□ -0.36
TRAPPC12-222ENST00000493792 WNT10BO00744 389 aa12.81□□□□□ -0.36
TRAPPC12-222ENST00000493792 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-222ENST00000493792 CFAP100Q494V2 611 aa12.81□□□□□ -0.36
TRAPPC12-222ENST00000493792 LDLRAD1Q5T700 205 aa12.81□□□□□ -0.36
TRAPPC12-222ENST00000493792 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-222ENST00000493792 BRCA2P51587 3418 aa12.81□□□□□ -0.36
TRAPPC12-222ENST00000493792 CENPFP49454 3210 aa12.81□□□□□ -0.36
TRAPPC12-222ENST00000493792 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
TRAPPC12-222ENST00000493792 TNNI3KQ59H18 835 aa12.8□□□□□ -0.36
TRAPPC12-222ENST00000493792 ERC1Q8IUD2 1116 aa12.8□□□□□ -0.36
TRAPPC12-222ENST00000493792 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
TRAPPC12-222ENST00000493792 ZBED3Q96IU2 234 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-222ENST00000493792 DENND2AQ9ULE3 1009 aa12.8□□□□□ -0.36
TRAPPC12-222ENST00000493792 NOP58Q9Y2X3 529 aaKnown RBP12.8□□□□□ -0.36
TRAPPC12-222ENST00000493792 FPGT-TNNI3KV9GXZ4 949 aa12.8□□□□□ -0.36
TRAPPC12-222ENST00000493792 ARAP2Q8WZ64 1704 aa12.79□□□□□ -0.36
TRAPPC12-222ENST00000493792 MYO1BO43795 1136 aa12.79□□□□□ -0.36
TRAPPC12-222ENST00000493792 SPRYD7Q5W111 196 aa12.79□□□□□ -0.36
TRAPPC12-222ENST00000493792 OTOP1Q7RTM1 612 aa12.79□□□□□ -0.36
TRAPPC12-222ENST00000493792 CRBNQ96SW2 442 aa12.79□□□□□ -0.36
TRAPPC12-222ENST00000493792 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 SEMA3EO15041 775 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 SREBF2Q12772 1141 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 RASGRF1Q13972 1273 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 GRIK5Q16478 980 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 TTC39AQ5SRH9 613 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 SIRT2Q8IXJ6 389 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 DBNDD2Q9BQY9 259 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 VEZTQ9HBM0 779 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 IL1RAPL2Q9NP60 686 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 GPR108Q9NPR9 543 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 ABCF2Q9UG63 623 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 TRIM17Q9Y577 477 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 PCDHAC2Q9Y5I4 1007 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 MAST3O60307 1309 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 PAPPA2Q9BXP8 1791 aa12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 COL1A1P02452 1464 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC12-222ENST00000493792 LDHBP07195 334 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-222ENST00000493792 UQCRFS1P1P0C7P4 283 aa12.77□□□□□ -0.37
TRAPPC12-222ENST00000493792 EN2P19622 333 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-222ENST00000493792 CRKP46108 304 aa12.77□□□□□ -0.37
TRAPPC12-222ENST00000493792 CAP1Q01518 475 aa12.77□□□□□ -0.37
TRAPPC12-222ENST00000493792 TTLL12Q14166 644 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms