RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 ZFYP08048 801 aaPredicted RBP18.32■□□□□ 0.52
BRD9-208ENST00000489816 PDE6AP16499 860 aa18.32■□□□□ 0.52
BRD9-208ENST00000489816 CDC27P30260 824 aa18.32■□□□□ 0.52
BRD9-208ENST00000489816 LRRFIP1Q32MZ4 808 aaKnown RBP18.32■□□□□ 0.52
BRD9-208ENST00000489816 SPECC1Q5M775 1068 aa18.32■□□□□ 0.52
BRD9-208ENST00000489816 FBXO18Q8NFZ0 1043 aa18.32■□□□□ 0.52
BRD9-208ENST00000489816 BCAMP50895 628 aa18.32■□□□□ 0.52
BRD9-208ENST00000489816 PKD1L3Q7Z443 1732 aa18.31■□□□□ 0.52
BRD9-208ENST00000489816 FAM160A1Q05DH4 1040 aa18.31■□□□□ 0.52
BRD9-208ENST00000489816 TRIM28Q13263 835 aaKnown RBP18.31■□□□□ 0.52
BRD9-208ENST00000489816 CHMP4CQ96CF2 233 aa18.31■□□□□ 0.52
BRD9-208ENST00000489816 MPHOSPH8Q99549 860 aa18.31■□□□□ 0.52
BRD9-208ENST00000489816 SUSD4Q5VX71 490 aa18.31■□□□□ 0.52
BRD9-208ENST00000489816 RBM43Q6ZSC3 357 aaKnown RBP18.31■□□□□ 0.52
BRD9-208ENST00000489816 ALG1Q9BT22 464 aa18.31■□□□□ 0.52
BRD9-208ENST00000489816 MBD4O95243 580 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.52
BRD9-208ENST00000489816 IQCB1Q15051 598 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 DPCR1Q3MIW9 517 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 ZSCAN25Q6NSZ9 544 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 LINC00301Q8NCQ3 95 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 TRMT1Q9NXH9 659 aaKnown RBP18.3■□□□□ 0.52
BRD9-208ENST00000489816 NEDD4P46934 1319 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 HSP90AA4PQ58FG1 418 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 MYSM1Q5VVJ2 828 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 ENGASEQ8NFI3 743 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 TDRD7Q8NHU6 1098 aaKnown RBP18.3■□□□□ 0.52
BRD9-208ENST00000489816 MRPS27Q92552 414 aaKnown RBP18.3■□□□□ 0.52
BRD9-208ENST00000489816 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
BRD9-208ENST00000489816 RIC1Q4ADV7 1423 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 LMTK3Q96Q04 1460 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 SPTLC2O15270 562 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 RASGRF1Q13972 1273 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 ABCF2Q9UG63 623 aa18.3■□□□□ 0.52
BRD9-208ENST00000489816 RIOK3O14730 519 aaKnown RBP18.29■□□□□ 0.52
BRD9-208ENST00000489816 ZRSR1Q15695 479 aaKnown RBP18.29■□□□□ 0.52
BRD9-208ENST00000489816 BICDL1Q6ZP65 573 aa18.29■□□□□ 0.52
BRD9-208ENST00000489816 CCDC24Q8N4L8 307 aa18.29■□□□□ 0.52
BRD9-208ENST00000489816 CLIC6Q96NY7 704 aa18.29■□□□□ 0.52
BRD9-208ENST00000489816 PDCL3Q9H2J4 239 aa18.29■□□□□ 0.52
BRD9-208ENST00000489816 STX1AQ16623 288 aa18.29■□□□□ 0.52
BRD9-208ENST00000489816 PLA2G4DQ86XP0 818 aa18.29■□□□□ 0.52
BRD9-208ENST00000489816 MYRIPQ8NFW9 859 aa18.29■□□□□ 0.52
BRD9-208ENST00000489816 TJP1Q07157 1748 aa18.29■□□□□ 0.52
BRD9-208ENST00000489816 PDE8AO60658 829 aa18.28■□□□□ 0.52
BRD9-208ENST00000489816 ANGEL1Q9UNK9 670 aaKnown RBP18.28■□□□□ 0.52
BRD9-208ENST00000489816 NUTM2BA6NNL0 878 aaPredicted RBP18.28■□□□□ 0.52
BRD9-208ENST00000489816 NUTM2EB1AL46 878 aaPredicted RBP18.28■□□□□ 0.52
BRD9-208ENST00000489816 WDHD1O75717 1129 aaPredicted RBP18.28■□□□□ 0.52
BRD9-208ENST00000489816 TMEM67Q5HYA8 995 aa18.28■□□□□ 0.52
BRD9-208ENST00000489816 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
BRD9-208ENST00000489816 VGLL2Q8N8G2 317 aa18.28■□□□□ 0.52
BRD9-208ENST00000489816 NAPBQ9H115 298 aa18.28■□□□□ 0.52
BRD9-208ENST00000489816 DYNC1I1O14576 645 aa18.28■□□□□ 0.52
BRD9-208ENST00000489816 DHX16O60231 1041 aaKnown RBP18.28■□□□□ 0.52
BRD9-208ENST00000489816 ATP6V1AP38606 617 aa18.28■□□□□ 0.52
BRD9-208ENST00000489816 FMR1NBQ8N0W7 255 aaPredicted RBP18.28■□□□□ 0.52
BRD9-208ENST00000489816 TACC3Q9Y6A5 838 aa18.28■□□□□ 0.52
BRD9-208ENST00000489816 hCG_1642624A0A1W2PR95 340 aa18.27■□□□□ 0.52
BRD9-208ENST00000489816 USP27XA6NNY8 438 aa18.27■□□□□ 0.52
BRD9-208ENST00000489816 NAA30Q147X3 362 aaPredicted RBP18.27■□□□□ 0.52
BRD9-208ENST00000489816 SPATA5Q8NB90 893 aa18.27■□□□□ 0.52
BRD9-208ENST00000489816 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.27■□□□□ 0.52
BRD9-208ENST00000489816 SLC26A6Q9BXS9 759 aa18.27■□□□□ 0.52
BRD9-208ENST00000489816 SPTLC3Q9NUV7 552 aa18.27■□□□□ 0.52
BRD9-208ENST00000489816 ZSWIM5Q9P217 1185 aa18.27■□□□□ 0.52
BRD9-208ENST00000489816 IFIT3O14879 490 aaKnown RBP18.27■□□□□ 0.51
BRD9-208ENST00000489816 TERF1P54274 439 aa18.27■□□□□ 0.51
BRD9-208ENST00000489816 SLC4A8Q2Y0W8 1093 aa18.27■□□□□ 0.51
BRD9-208ENST00000489816 APOA5Q6Q788 366 aa18.27■□□□□ 0.51
BRD9-208ENST00000489816 DHX40Q8IX18 779 aaKnown RBP18.27■□□□□ 0.51
BRD9-208ENST00000489816 ADALQ6DHV7 355 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 VPS37DQ86XT2 251 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 NUP133Q8WUM0 1156 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 UBE2Q2Q8WVN8 375 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 EPB41L4AQ9HCS5 686 aaPredicted RBP18.26■□□□□ 0.51
BRD9-208ENST00000489816 RTEL1Q9NZ71 1219 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 TNS2Q63HR2 1409 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 MINDY4BA8MYZ0 360 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 KIF23Q02241 960 aaPredicted RBP18.26■□□□□ 0.51
BRD9-208ENST00000489816 TPD52L1Q16890 204 aaPredicted RBP18.26■□□□□ 0.51
BRD9-208ENST00000489816 KRT40Q6A162 431 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 STRBPQ96SI9 672 aaKnown RBP18.26■□□□□ 0.51
BRD9-208ENST00000489816 KCNJ14Q9UNX9 436 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 ZNF202O95125 648 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 GUCY1A2P33402 732 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 SDR42E1Q8WUS8 393 aa18.26■□□□□ 0.51
BRD9-208ENST00000489816 MYO5AQ9Y4I1 1855 aaKnown RBP18.25■□□□□ 0.51
BRD9-208ENST00000489816 GOLGA8AA7E2F4 631 aa18.25■□□□□ 0.51
BRD9-208ENST00000489816 SMC2O95347 1197 aa18.25■□□□□ 0.51
BRD9-208ENST00000489816 TDO2P48775 406 aa18.25■□□□□ 0.51
BRD9-208ENST00000489816 ANO1Q5XXA6 986 aa18.25■□□□□ 0.51
BRD9-208ENST00000489816 ANO10Q9NW15 660 aa18.25■□□□□ 0.51
BRD9-208ENST00000489816 LRP2BPQ9P2M1 347 aa18.25■□□□□ 0.51
BRD9-208ENST00000489816 NIP7Q9Y221 180 aaKnown RBP eCLIP18.25■□□□□ 0.51
BRD9-208ENST00000489816 ZBTB43O43298 467 aa18.25■□□□□ 0.51
BRD9-208ENST00000489816 LMOD1P29536 600 aaPredicted RBP18.25■□□□□ 0.51
BRD9-208ENST00000489816 PUM3Q15397 648 aaKnown RBP18.25■□□□□ 0.51
BRD9-208ENST00000489816 IFNL3Q8IZI9 196 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms