RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 BEND4Q6ZU67 534 aa6.36□□□□□ -1.39
NF1-213ENST00000489712 TRIM42Q8IWZ5 723 aa6.36□□□□□ -1.39
NF1-213ENST00000489712 C12orf50Q8NA57 414 aaPredicted RBP6.36□□□□□ -1.39
NF1-213ENST00000489712 DBNDD2Q9BQY9 259 aa6.36□□□□□ -1.39
NF1-213ENST00000489712 ZFYVE1Q9HBF4 777 aa6.36□□□□□ -1.39
NF1-213ENST00000489712 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 HMX2A2RU54 273 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 DLGAP3O95886 979 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 MAOBP27338 520 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 MAP4P27816 1152 aaKnown RBP6.35□□□□□ -1.39
NF1-213ENST00000489712 GRM2Q14416 872 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 POU4F3Q15319 338 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 EXOSC6Q5RKV6 272 aaKnown RBP6.35□□□□□ -1.39
NF1-213ENST00000489712 RNF43Q68DV7 783 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 NBPF11Q86T75 865 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 CLEC10AQ8IUN9 316 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 FAM83CQ9BQN1 747 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 CORO1BQ9BR76 489 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 NLRP2Q9NX02 1062 aa6.35□□□□□ -1.39
NF1-213ENST00000489712 PNMA6FA0A0J9YX94 578 aa6.34□□□□□ -1.39
NF1-213ENST00000489712 PATL2C9JE40 543 aaKnown RBP6.34□□□□□ -1.39
NF1-213ENST00000489712 TREHO43280 583 aa6.34□□□□□ -1.39
NF1-213ENST00000489712 SGO2Q562F6 1265 aa6.34□□□□□ -1.39
NF1-213ENST00000489712 RPS26P11Q5JNZ5 115 aaPredicted RBP6.34□□□□□ -1.39
NF1-213ENST00000489712 ZSCAN29Q8IWY8 852 aaPredicted RBP6.34□□□□□ -1.39
NF1-213ENST00000489712 EPS8L3Q8TE67 593 aaKnown RBP6.34□□□□□ -1.39
NF1-213ENST00000489712 TRIM56Q9BRZ2 755 aaKnown RBP6.34□□□□□ -1.39
NF1-213ENST00000489712 HYAL3O43820 417 aaPredicted RBP6.33□□□□□ -1.4
NF1-213ENST00000489712 ADH5P11766 374 aa6.33□□□□□ -1.4
NF1-213ENST00000489712 RXRBP28702 533 aa6.33□□□□□ -1.4
NF1-213ENST00000489712 AP3B2Q13367 1082 aa6.33□□□□□ -1.4
NF1-213ENST00000489712 ENOX2Q16206 610 aaKnown RBP6.33□□□□□ -1.4
NF1-213ENST00000489712 DTHD1Q6ZMT9 781 aa6.33□□□□□ -1.4
NF1-213ENST00000489712 ZDHHC13Q8IUH4 622 aa6.33□□□□□ -1.4
NF1-213ENST00000489712 GLIS3Q8NEA6 775 aa6.33□□□□□ -1.4
NF1-213ENST00000489712 TRAIPQ9BWF2 469 aa6.33□□□□□ -1.4
NF1-213ENST00000489712 YIPF2Q9BWQ6 316 aa6.33□□□□□ -1.4
NF1-213ENST00000489712 TGFB1P01137 390 aa6.32□□□□□ -1.4
NF1-213ENST00000489712 CTSBP07858 339 aa6.32□□□□□ -1.4
NF1-213ENST00000489712 USP11P51784 963 aa6.32□□□□□ -1.4
NF1-213ENST00000489712 HNRNPUQ00839 825 aaKnown RBP eCLIP6.32□□□□□ -1.4
NF1-213ENST00000489712 SOX4Q06945 474 aaPredicted RBP6.32□□□□□ -1.4
NF1-213ENST00000489712 PDE3AQ14432 1141 aa6.32□□□□□ -1.4
NF1-213ENST00000489712 DSC3Q14574 896 aa6.32□□□□□ -1.4
NF1-213ENST00000489712 PI16Q6UXB8 463 aa6.32□□□□□ -1.4
NF1-213ENST00000489712 C2CD4AQ8NCU7 369 aaPredicted RBP6.32□□□□□ -1.4
NF1-213ENST00000489712 PCMTD2Q9NV79 361 aa6.32□□□□□ -1.4
NF1-213ENST00000489712 PPP4R2Q9NY27 417 aa6.32□□□□□ -1.4
NF1-213ENST00000489712 XRCC5P13010 732 aaKnown RBP6.31□□□□□ -1.4
NF1-213ENST00000489712 DRD2P14416 443 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 SSTR4P31391 388 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 GRIK1P39086 918 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 CD97P48960 835 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 FCGRTP55899 365 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 PLCB3Q01970 1234 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 PAOXQ6QHF9 649 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 GIMAP7Q8NHV1 300 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 SHKBP1Q8TBC3 707 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 FBF1Q8TES7 1133 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 ASB16Q96NS5 453 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 RAD18Q9NS91 495 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 GPN3Q9UHW5 284 aaPredicted RBP6.31□□□□□ -1.4
NF1-213ENST00000489712 AP4E1Q9UPM8 1137 aa6.31□□□□□ -1.4
NF1-213ENST00000489712 FAM95CA0A1B0GW59 222 aa6.3□□□□□ -1.4
NF1-213ENST00000489712 COBLO75128 1261 aa6.3□□□□□ -1.4
NF1-213ENST00000489712 ECEL1O95672 775 aa6.3□□□□□ -1.4
NF1-213ENST00000489712 MAPK8P45983 427 aa6.3□□□□□ -1.4
NF1-213ENST00000489712 FMR1Q06787 632 aaKnown RBP eCLIP6.3□□□□□ -1.42e-6■■■■□ 22.7
NF1-213ENST00000489712 FAAP100Q0VG06 881 aa6.3□□□□□ -1.4
NF1-213ENST00000489712 AKAP4Q5JQC9 854 aa6.3□□□□□ -1.4
NF1-213ENST00000489712 BCO2Q9BYV7 579 aa6.3□□□□□ -1.4
NF1-213ENST00000489712 ACTL7BQ9Y614 415 aa6.3□□□□□ -1.4
NF1-213ENST00000489712 KIAA1324LA8MWY0 1029 aaPredicted RBP6.29□□□□□ -1.4
NF1-213ENST00000489712 RAB6AP20340 208 aa6.29□□□□□ -1.4
NF1-213ENST00000489712 ATP2B2Q01814 1243 aa6.29□□□□□ -1.4
NF1-213ENST00000489712 PPP2R3AQ06190 1150 aa6.29□□□□□ -1.4
NF1-213ENST00000489712 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.29□□□□□ -1.4
NF1-213ENST00000489712 CDPF1Q6NVV7 123 aa6.29□□□□□ -1.4
NF1-213ENST00000489712 INTS5Q6P9B9 1019 aaKnown RBP6.29□□□□□ -1.4
NF1-213ENST00000489712 FBLIM1Q8WUP2 373 aa6.29□□□□□ -1.4
NF1-213ENST00000489712 MFSD14AQ96MC6 490 aa6.29□□□□□ -1.4
NF1-213ENST00000489712 WDR64B1ANS9 1081 aa6.28□□□□□ -1.4
NF1-213ENST00000489712 ZNF157P51786 506 aaPredicted RBP6.28□□□□□ -1.4
NF1-213ENST00000489712 NFKBIBQ15653 356 aa6.28□□□□□ -1.4
NF1-213ENST00000489712 CPSF6Q16630 551 aaKnown RBP eCLIP6.28□□□□□ -1.4
NF1-213ENST00000489712 DYMQ7RTS9 669 aa6.28□□□□□ -1.4
NF1-213ENST00000489712 FBXL6Q8N531 539 aa6.28□□□□□ -1.4
NF1-213ENST00000489712 EZH1Q92800 747 aaPredicted RBP6.28□□□□□ -1.4
NF1-213ENST00000489712 WDR18Q9BV38 432 aa6.28□□□□□ -1.4
NF1-213ENST00000489712 TMEM39AQ9NV64 488 aa6.28□□□□□ -1.4
NF1-213ENST00000489712 SYNGAP1Q96PV0 1343 aa6.27□□□□□ -1.41
NF1-213ENST00000489712 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.27□□□□□ -1.41
NF1-213ENST00000489712 AOC2O75106 756 aa6.27□□□□□ -1.41
NF1-213ENST00000489712 GSTP1P09211 210 aaKnown RBP6.27□□□□□ -1.41
NF1-213ENST00000489712 MAP7Q14244 749 aa6.27□□□□□ -1.41
NF1-213ENST00000489712 ALG1LQ6GMV1 187 aa6.27□□□□□ -1.41
NF1-213ENST00000489712 NXPE4Q6UWF7 544 aa6.27□□□□□ -1.41
NF1-213ENST00000489712 METTL22Q9BUU2 404 aaPredicted RBP6.27□□□□□ -1.41
NF1-213ENST00000489712 SRCIN1Q9C0H9 1055 aa6.27□□□□□ -1.41
NF1-213ENST00000489712 ATG3Q9NT62 314 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms