RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 FSD1Q9BTV5 496 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.63□□□□□ -1.192e-7■■□□□ 12.7
SF3A3-208ENST00000489537 SIL1Q9H173 461 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 HELLSQ9NRZ9 838 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 PA2G4Q9UQ80 394 aaKnown RBP7.63□□□□□ -1.19
SF3A3-208ENST00000489537 MYH14Q7Z406 1995 aaKnown RBP7.62□□□□□ -1.19
SF3A3-208ENST00000489537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.62□□□□□ -1.19
SF3A3-208ENST00000489537 IGHMBP2P38935 993 aaKnown RBP7.62□□□□□ -1.19
SF3A3-208ENST00000489537 KCNJ4P48050 445 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 COPS2P61201 443 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 TFCP2Q12800 502 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 KMT5BQ4FZB7 885 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 EPHA10Q5JZY3 1008 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 LDHAL6AQ6ZMR3 332 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 SLC16A10Q8TF71 515 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 BCL11AQ9H165 835 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 CTNNA3Q9UI47 895 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 ZBTB1Q9Y2K1 713 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 PCDHB3Q9Y5E6 796 aa7.62□□□□□ -1.19
SF3A3-208ENST00000489537 ZPR1O75312 459 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 RPS6KA4O75676 772 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 NEK4P51957 841 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 TSGA10IPQ3SY00 556 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 PPP1R18Q6NYC8 613 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 INTS5Q6P9B9 1019 aaKnown RBP7.61□□□□□ -1.19
SF3A3-208ENST00000489537 KBTBD3Q8NAB2 608 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 TTLL11Q8NHH1 800 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 KCNB2Q92953 911 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 NEUROD6Q96NK8 337 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 MPHOSPH8Q99549 860 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 KIF2CQ99661 725 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 CCDC8Q9H0W5 538 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-208ENST00000489537 ALDH8A1Q9H2A2 487 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-208ENST00000489537 ANTXR1Q9H6X2 564 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.61□□□□□ -1.19
SF3A3-208ENST00000489537 SH2B1Q9NRF2 756 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-208ENST00000489537 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-208ENST00000489537 ADGRG1Q9Y653 693 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 CEP350Q5VT06 3117 aa7.61□□□□□ -1.19
SF3A3-208ENST00000489537 AFDNP55196 1824 aaKnown RBP7.6□□□□□ -1.19
SF3A3-208ENST00000489537 A0A1B0GUL7 405 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 CAMTA2O94983 1202 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 OATP04181 439 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 IFIT1P09914 478 aaKnown RBP7.6□□□□□ -1.19
SF3A3-208ENST00000489537 SLC5A1P13866 664 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 ITGA6P23229 1130 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 SSFA2P28290 1259 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 PIP4K2AP48426 406 aaPredicted RBP7.6□□□□□ -1.19
SF3A3-208ENST00000489537 NFKBIBQ15653 356 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 GPR162Q16538 588 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 ATP2B3Q16720 1220 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 MCMDC2Q4G0Z9 681 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 METTL24Q5JXM2 366 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 TTC39AQ5SRH9 613 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 CWC27Q6UX04 472 aaKnown RBP7.6□□□□□ -1.19
SF3A3-208ENST00000489537 Q6ZNB5 142 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 ATG9AQ7Z3C6 839 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 LPIN2Q92539 896 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 ZNF516Q92618 1163 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 MAP4K1Q92918 833 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 FAM89AQ96GI7 184 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 TMEM134Q9H6X4 195 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 CNNM1Q9NRU3 951 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 GNL3LQ9NVN8 582 aaKnown RBP7.6□□□□□ -1.19
SF3A3-208ENST00000489537 PAG1Q9NWQ8 432 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 DBNLQ9UJU6 430 aaKnown RBP7.6□□□□□ -1.19
SF3A3-208ENST00000489537 ISY1Q9ULR0 285 aaKnown RBP7.6□□□□□ -1.19
SF3A3-208ENST00000489537 TBC1D2BQ9UPU7 963 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 RTCBQ9Y3I0 505 aaKnown RBP7.6□□□□□ -1.19
SF3A3-208ENST00000489537 KIF3AQ9Y496 699 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 ATP6V1DQ9Y5K8 247 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 CYP46A1Q9Y6A2 500 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 KIAA1551Q9HCM1 1747 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 CHD4Q14839 1912 aa7.6□□□□□ -1.19
SF3A3-208ENST00000489537 SPEF2Q9C093 1822 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 CCDC171Q6TFL3 1326 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 RCCD1A6NED2 376 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 PDE8BO95263 885 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 GTF2E1P29083 439 aaPredicted RBP7.59□□□□□ -1.19
SF3A3-208ENST00000489537 NT5C2P49902 561 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 HIC1Q14526 733 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 PUM3Q15397 648 aaKnown RBP7.59□□□□□ -1.19
SF3A3-208ENST00000489537 VPS53Q5VIR6 699 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 TPTE2Q6XPS3 522 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 CLEC17AQ6ZS10 378 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 DSCC1Q9BVC3 393 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 PRKD2Q9BZL6 878 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 LSG1Q9H089 658 aaKnown RBP7.59□□□□□ -1.19
SF3A3-208ENST00000489537 SLKQ9H2G2 1235 aaPredicted RBP7.59□□□□□ -1.19
SF3A3-208ENST00000489537 BOLA2Q9H3K6 86 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 NARFQ9UHQ1 456 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 NIP7Q9Y221 180 aaKnown RBP eCLIP7.59□□□□□ -1.19
SF3A3-208ENST00000489537 V9GY48 417 aaPredicted RBP7.59□□□□□ -1.19
SF3A3-208ENST00000489537 ZNF609O15014 1411 aa7.59□□□□□ -1.19
SF3A3-208ENST00000489537 COL5A3P25940 1745 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-208ENST00000489537 GNPATO15228 680 aa7.58□□□□□ -1.2
SF3A3-208ENST00000489537 RNF113AO15541 343 aaKnown RBP7.58□□□□□ -1.2
SF3A3-208ENST00000489537 PDCP20941 246 aa7.58□□□□□ -1.2
SF3A3-208ENST00000489537 POLD1P28340 1107 aa7.58□□□□□ -1.2
SF3A3-208ENST00000489537 CUL4AQ13619 759 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms