RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 LAMB1P07942 1786 aa32.58■■■□□ 2.81
RNF220-216ENST00000488865 KIF16BQ96L93 1317 aa32.57■■■□□ 2.8
RNF220-216ENST00000488865 FRAT2O75474 233 aaPredicted RBP32.57■■■□□ 2.8
RNF220-216ENST00000488865 IFNL1Q8IU54 200 aa32.57■■■□□ 2.8
RNF220-216ENST00000488865 ANKRD13AQ8IZ07 590 aa32.57■■■□□ 2.8
RNF220-216ENST00000488865 SMC4Q9NTJ3 1288 aa32.57■■■□□ 2.8
RNF220-216ENST00000488865 FKTNO75072 461 aa32.56■■■□□ 2.8
RNF220-216ENST00000488865 CHAF1AQ13111 956 aaPredicted RBP32.56■■■□□ 2.8
RNF220-216ENST00000488865 PUM3Q15397 648 aaKnown RBP32.56■■■□□ 2.8
RNF220-216ENST00000488865 HPS5Q9UPZ3 1129 aa32.56■■■□□ 2.8
RNF220-216ENST00000488865 IFIT1P09914 478 aaKnown RBP32.55■■■□□ 2.8
RNF220-216ENST00000488865 CT47B1P0C2W7 299 aaPredicted RBP32.55■■■□□ 2.8
RNF220-216ENST00000488865 FGFR2P21802 821 aa32.55■■■□□ 2.8
RNF220-216ENST00000488865 GRIK5Q16478 980 aa32.55■■■□□ 2.8
RNF220-216ENST00000488865 R3HDMLQ9H3Y0 253 aa32.55■■■□□ 2.8
RNF220-216ENST00000488865 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.55■■■□□ 2.8
RNF220-216ENST00000488865 RFX5P48382 616 aaPredicted RBP32.54■■■□□ 2.8
RNF220-216ENST00000488865 TNNI2P48788 182 aa32.54■■■□□ 2.8
RNF220-216ENST00000488865 BCAMP50895 628 aa32.54■■■□□ 2.8
RNF220-216ENST00000488865 TEPSINQ96N21 525 aa32.54■■■□□ 2.8
RNF220-216ENST00000488865 MRIQ9BWK5 157 aa32.54■■■□□ 2.8
RNF220-216ENST00000488865 EYA2O00167 538 aa32.53■■■□□ 2.8
RNF220-216ENST00000488865 SUGT1Q9Y2Z0 365 aa32.53■■■□□ 2.8
RNF220-216ENST00000488865 TCP10L2B9ZVM9 353 aa32.52■■■□□ 2.8
RNF220-216ENST00000488865 SOX10P56693 466 aa32.52■■■□□ 2.8
RNF220-216ENST00000488865 TEKT1Q969V4 418 aa32.52■■■□□ 2.8
RNF220-216ENST00000488865 TNRC18O15417 2968 aaPredicted RBP32.51■■■□□ 2.79
RNF220-216ENST00000488865 IGF2BP3O00425 579 aaKnown RBP eCLIP32.5■■■□□ 2.79
RNF220-216ENST00000488865 GJA5P36382 358 aa32.5■■■□□ 2.79
RNF220-216ENST00000488865 FBXO46Q6PJ61 603 aaPredicted RBP32.5■■■□□ 2.79
RNF220-216ENST00000488865 TMEM39BQ9GZU3 492 aa32.5■■■□□ 2.79
RNF220-216ENST00000488865 OTUD7BQ6GQQ9 843 aa32.49■■■□□ 2.79
RNF220-216ENST00000488865 LPIN2Q92539 896 aa32.49■■■□□ 2.79
RNF220-216ENST00000488865 ZDHHC15Q96MV8 337 aa32.49■■■□□ 2.79
RNF220-216ENST00000488865 FBXO3Q9UK99 471 aa32.49■■■□□ 2.79
RNF220-216ENST00000488865 MAST3O60307 1309 aa32.49■■■□□ 2.79
RNF220-216ENST00000488865 SLC5A1P13866 664 aa32.48■■■□□ 2.79
RNF220-216ENST00000488865 CDAN1Q8IWY9 1227 aa32.48■■■□□ 2.79
RNF220-216ENST00000488865 OTOFQ9HC10 1997 aa32.48■■■□□ 2.79
RNF220-216ENST00000488865 TESPA1A2RU30 521 aaPredicted RBP32.47■■■□□ 2.79
RNF220-216ENST00000488865 UBTFL1P0CB47 393 aaPredicted RBP32.47■■■□□ 2.79
RNF220-216ENST00000488865 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.46■■■□□ 2.79
RNF220-216ENST00000488865 ATG9AQ7Z3C6 839 aa32.46■■■□□ 2.79
RNF220-216ENST00000488865 OPTNQ96CV9 577 aa32.46■■■□□ 2.79
RNF220-216ENST00000488865 ELP3Q9H9T3 547 aa32.46■■■□□ 2.79
RNF220-216ENST00000488865 NOB1Q9ULX3 412 aaKnown RBP32.46■■■□□ 2.79
RNF220-216ENST00000488865 MAP3K9P80192 1104 aa32.45■■■□□ 2.79
RNF220-216ENST00000488865 FKBP1CQ5VVH2 108 aa32.45■■■□□ 2.79
RNF220-216ENST00000488865 HHIPL2Q6UWX4 724 aa32.45■■■□□ 2.79
RNF220-216ENST00000488865 WDR66Q8TBY9 1149 aa32.45■■■□□ 2.79
RNF220-216ENST00000488865 API5Q9BZZ5 524 aaKnown RBP32.45■■■□□ 2.79
RNF220-216ENST00000488865 TMOD2Q9NZR1 351 aa32.45■■■□□ 2.79
RNF220-216ENST00000488865 HDAC5Q9UQL6 1122 aa32.45■■■□□ 2.79
RNF220-216ENST00000488865 CIAO1O76071 339 aa32.44■■■□□ 2.78
RNF220-216ENST00000488865 APOBEC3HQ6NTF7 200 aaKnown RBP32.44■■■□□ 2.78
RNF220-216ENST00000488865 FAM83AQ86UY5 434 aa32.44■■■□□ 2.78
RNF220-216ENST00000488865 CCER2I3L3R5 266 aa32.43■■■□□ 2.78
RNF220-216ENST00000488865 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.43■■■□□ 2.784e-9■■□□□ 11.7
RNF220-216ENST00000488865 PTPN18Q99952 460 aa32.43■■■□□ 2.78
RNF220-216ENST00000488865 CACNB3P54284 484 aa32.42■■■□□ 2.78
RNF220-216ENST00000488865 VGLL4Q14135 290 aa32.42■■■□□ 2.78
RNF220-216ENST00000488865 MS4A4AQ96JQ5 239 aa32.42■■■□□ 2.78
RNF220-216ENST00000488865 CSADQ9Y600 493 aa32.42■■■□□ 2.78
RNF220-216ENST00000488865 CRHR2Q13324 411 aa32.41■■■□□ 2.78
RNF220-216ENST00000488865 CEP126Q9P2H0 1117 aa32.41■■■□□ 2.78
RNF220-216ENST00000488865 MYH13Q9UKX3 1938 aa32.41■■■□□ 2.78
RNF220-216ENST00000488865 HOOK2Q96ED9 719 aa32.4■■■□□ 2.78
RNF220-216ENST00000488865 SIL1Q9H173 461 aa32.4■■■□□ 2.78
RNF220-216ENST00000488865 ERO1AQ96HE7 468 aa32.39■■■□□ 2.78
RNF220-216ENST00000488865 TRIM17Q9Y577 477 aa32.39■■■□□ 2.78
RNF220-216ENST00000488865 LRRFIP2Q9Y608 721 aaKnown RBP32.39■■■□□ 2.78
RNF220-216ENST00000488865 GTF2A2P52657 109 aa32.38■■■□□ 2.77
RNF220-216ENST00000488865 ATP2B3Q16720 1220 aa32.38■■■□□ 2.77
RNF220-216ENST00000488865 GNL3LQ9NVN8 582 aaKnown RBP32.38■■■□□ 2.77
RNF220-216ENST00000488865 IL15P40933 162 aaPredicted RBP32.37■■■□□ 2.77
RNF220-216ENST00000488865 OTOP1Q7RTM1 612 aa32.37■■■□□ 2.77
RNF220-216ENST00000488865 CNKSR2Q8WXI2 1034 aa32.37■■■□□ 2.77
RNF220-216ENST00000488865 RPAP1Q9BWH6 1393 aaPredicted RBP32.36■■■□□ 2.77
RNF220-216ENST00000488865 RARSP54136 660 aaKnown RBP32.36■■■□□ 2.77
RNF220-216ENST00000488865 ARHGAP45Q92619 1136 aa32.36■■■□□ 2.77
RNF220-216ENST00000488865 HTTP42858 3142 aa32.36■■■□□ 2.77
RNF220-216ENST00000488865 BRI3BPQ8WY22 251 aa32.35■■■□□ 2.77
RNF220-216ENST00000488865 COPRSQ9NQ92 184 aa32.35■■■□□ 2.77
RNF220-216ENST00000488865 PDE4DIPQ5VU43 2346 aa32.34■■■□□ 2.77
RNF220-216ENST00000488865 CCL15-CCL14A0A0B4J2E2 113 aa32.34■■■□□ 2.77
RNF220-216ENST00000488865 SPDYE5A6NIY4 337 aa32.34■■■□□ 2.77
RNF220-216ENST00000488865 ZBTB22O15209 634 aa32.34■■■□□ 2.77
RNF220-216ENST00000488865 CCL15Q16663 113 aa32.34■■■□□ 2.77
RNF220-216ENST00000488865 DCAF15Q66K64 600 aa32.34■■■□□ 2.77
RNF220-216ENST00000488865 OTUD5Q96G74 571 aa32.34■■■□□ 2.77
RNF220-216ENST00000488865 SEMA3EO15041 775 aa32.33■■■□□ 2.77
RNF220-216ENST00000488865 SP3Q02447 781 aa32.33■■■□□ 2.77
RNF220-216ENST00000488865 ERO1BQ86YB8 467 aa32.33■■■□□ 2.77
RNF220-216ENST00000488865 WRNIP1Q96S55 665 aa32.33■■■□□ 2.77
RNF220-216ENST00000488865 MEIS3Q99687 375 aa32.33■■■□□ 2.77
RNF220-216ENST00000488865 SNCAIPQ9Y6H5 919 aa32.33■■■□□ 2.77
RNF220-216ENST00000488865 SALL1Q9NSC2 1324 aa32.32■■■□□ 2.76
RNF220-216ENST00000488865 INTS3Q68E01 1043 aaKnown RBP32.32■■■□□ 2.76
RNF220-216ENST00000488865 CD99L2Q8TCZ2 262 aa32.32■■■□□ 2.76
RNF220-216ENST00000488865 DENND2AQ9ULE3 1009 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms