RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	GPRC5D	Q9NZD1	345 aa		11.81	□□□□□ -0.52
PTBP3-208	ENST00000487997	PA2G4	Q9UQ80	394 aa	Known RBP	11.81	□□□□□ -0.52
PTBP3-208	ENST00000487997	ZNF646	O15015	1829 aa	Predicted RBP	11.81	□□□□□ -0.52
PTBP3-208	ENST00000487997	FRAT2	O75474	233 aa	Predicted RBP	11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	VIL1	P09327	827 aa	Known RBP	11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	SLC5A1	P13866	664 aa		11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	KLRK1	P26718	216 aa		11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	HIBADH	P31937	336 aa	Known RBP	11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	EPS15	P42566	896 aa		11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	ATP8B2	P98198	1209 aa		11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	PPP1R15B	Q5SWA1	713 aa		11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	TTLL5	Q6EMB2	1281 aa		11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	USP50	Q70EL3	339 aa	Predicted RBP	11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	LDHD	Q86WU2	507 aa		11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	DPF2	Q92785	391 aa		11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	CD209	Q9NNX6	404 aa		11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	ADARB2	Q9NS39	739 aa	Known RBP	11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	CNOT7	Q9UIV1	285 aa	Known RBP	11.8	□□□□□ -0.52
PTBP3-208	ENST00000487997	TRPM7	Q96QT4	1865 aa		11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	PNMA6E	A0A0J9YXQ4	647 aa		11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	GYG1	P46976	350 aa		11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	GTF2I	P78347	998 aa		11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	OS9	Q13438	667 aa	Predicted RBP	11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	STRIP1	Q5VSL9	837 aa		11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	ATG9A	Q7Z3C6	839 aa		11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	AGBL3	Q8NEM8	1001 aa		11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	LPIN2	Q92539	896 aa		11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	ARAP2	Q8WZ64	1704 aa		11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	MYO3B	Q8WXR4	1341 aa		11.79	□□□□□ -0.52
PTBP3-208	ENST00000487997	ADAMTSL1	Q8N6G6	1762 aa		11.78	□□□□□ -0.52
PTBP3-208	ENST00000487997	PDE4A	P27815	886 aa		11.78	□□□□□ -0.52
PTBP3-208	ENST00000487997	ATP2B3	Q16720	1220 aa		11.78	□□□□□ -0.52
PTBP3-208	ENST00000487997	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.78	□□□□□ -0.52
PTBP3-208	ENST00000487997	OGFOD1	Q8N543	542 aa		11.78	□□□□□ -0.52
PTBP3-208	ENST00000487997	VGLL2	Q8N8G2	317 aa		11.78	□□□□□ -0.52
PTBP3-208	ENST00000487997	OXER1	Q8TDS5	423 aa		11.78	□□□□□ -0.52
PTBP3-208	ENST00000487997	AKAP2	Q9Y2D5	859 aa		11.78	□□□□□ -0.52
PTBP3-208	ENST00000487997	ECM29	Q5VYK3	1845 aa		11.78	□□□□□ -0.52
PTBP3-208	ENST00000487997	HMMR	O75330	724 aa		11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	SURF6	O75683	361 aa	Known RBP	11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	USP17L8	P0C7I0	530 aa		11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	IL1R1	P14778	569 aa		11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	RBM26	Q5T8P6	1007 aa	Known RBP	11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	C20orf194	Q5TEA3	1177 aa		11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	SPRYD3	Q8NCJ5	442 aa		11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	SSH3	Q8TE77	659 aa		11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	FAM84B	Q96KN1	310 aa	Predicted RBP	11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	HDAC9	Q9UKV0	1011 aa		11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	IRS2	Q9Y4H2	1338 aa		11.77	□□□□□ -0.53
PTBP3-208	ENST00000487997	SASH1	O94885	1247 aa		11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	MMP14	P50281	582 aa		11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	RRP1	P56182	461 aa	Known RBP	11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	LSM11	P83369	360 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	DACT2	Q5SW24	774 aa		11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	CEP85	Q6P2H3	762 aa		11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	LARP6	Q9BRS8	491 aa	Known RBP	11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	ZBTB40	Q9NUA8	1239 aa		11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	GNL3L	Q9NVN8	582 aa	Known RBP	11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	ZNF609	O15014	1411 aa		11.76	□□□□□ -0.53
PTBP3-208	ENST00000487997	HSPA6	P17066	643 aa		11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	FGFR2	P21802	821 aa		11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	BCAM	P50895	628 aa		11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	TFCP2	Q12800	502 aa		11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	HSP90AB4P	Q58FF6	505 aa		11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	GORAB	Q5T7V8	394 aa		11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	SAMD7	Q7Z3H4	446 aa		11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	FBXO33	Q7Z6M2	555 aa		11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	TDRD7	Q8NHU6	1098 aa	Known RBP	11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	NEUROD6	Q96NK8	337 aa		11.75	□□□□□ -0.53
PTBP3-208	ENST00000487997	SHTN1	A0MZ66	631 aa		11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	TBC1D12	O60347	775 aa		11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	FKBP1A	P62942	108 aa	Known RBP	11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	CHAF1A	Q13111	956 aa	Predicted RBP	11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	KIF4B	Q2VIQ3	1234 aa		11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	MAP1S	Q66K74	1059 aa	Predicted RBP	11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	KIAA0825	Q8IV33	1275 aa		11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	CNTROB	Q8N137	903 aa		11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	ZC3H15	Q8WU90	426 aa	Known RBP	11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	TBC1D22A	Q8WUA7	517 aa		11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	MXD3	Q9BW11	206 aa		11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	MYOZ2	Q9NPC6	264 aa		11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997	JAG2	Q9Y219	1238 aa		11.74	□□□□□ -0.53
PTBP3-208	ENST00000487997		A0A1B0GUL7	405 aa		11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	PBX2	P40425	430 aa		11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	APLP1	P51693	650 aa		11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	ZNF280A	P59817	542 aa	Predicted RBP	11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	TIMM10	P62072	90 aa		11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	PLCB2	Q00722	1185 aa		11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	MFSD14B	Q5SR56	506 aa		11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	FAM205A	Q6ZU69	1335 aa		11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	ERC1	Q8IUD2	1116 aa		11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	TRPM4	Q8TD43	1214 aa		11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	DCPS	Q96C86	337 aa	Known RBP	11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	GML	Q99445	158 aa		11.73	□□□□□ -0.53
PTBP3-208	ENST00000487997	MYH2	Q9UKX2	1941 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms