RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
NR1H3-223ENST00000486991 HDAC9Q9UKV0 1011 aa16.19■□□□□ 0.18
NR1H3-223ENST00000486991 MROH5Q6ZUA9 1318 aa16.19■□□□□ 0.18
NR1H3-223ENST00000486991 CLRN2A0PK11 232 aa16.18■□□□□ 0.18
NR1H3-223ENST00000486991 GPR25O00155 361 aa16.18■□□□□ 0.18
NR1H3-223ENST00000486991 ATP8B2P98198 1209 aa16.18■□□□□ 0.18
NR1H3-223ENST00000486991 LDLRAD1Q5T700 205 aa16.18■□□□□ 0.18
NR1H3-223ENST00000486991 ATG9AQ7Z3C6 839 aa16.18■□□□□ 0.18
NR1H3-223ENST00000486991 ARMC9Q7Z3E5 817 aa16.18■□□□□ 0.18
NR1H3-223ENST00000486991 RPAP2Q8IXW5 612 aaPredicted RBP16.18■□□□□ 0.18
NR1H3-223ENST00000486991 CLMNQ96JQ2 1002 aa16.18■□□□□ 0.18
NR1H3-223ENST00000486991 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
NR1H3-223ENST00000486991 DLGAP5Q15398 846 aa16.17■□□□□ 0.18
NR1H3-223ENST00000486991 SPRYD7Q5W111 196 aa16.17■□□□□ 0.18
NR1H3-223ENST00000486991 APOBEC3FQ8IUX4 373 aaKnown RBP16.17■□□□□ 0.18
NR1H3-223ENST00000486991 FAM84BQ96KN1 310 aaPredicted RBP16.17■□□□□ 0.18
NR1H3-223ENST00000486991 DEFB129Q9H1M3 183 aa16.17■□□□□ 0.18
NR1H3-223ENST00000486991 GTF3C3Q9Y5Q9 886 aa16.17■□□□□ 0.18
NR1H3-223ENST00000486991 SSC5DA1L4H1 1573 aa16.17■□□□□ 0.18
NR1H3-223ENST00000486991 PNMA6EA0A0J9YXQ4 647 aa16.16■□□□□ 0.18
NR1H3-223ENST00000486991 EYA2O00167 538 aa16.16■□□□□ 0.18
NR1H3-223ENST00000486991 FGFR2P21802 821 aa16.16■□□□□ 0.18
NR1H3-223ENST00000486991 GYG1P46976 350 aa16.16■□□□□ 0.18
NR1H3-223ENST00000486991 MTX1Q13505 466 aa16.16■□□□□ 0.18
NR1H3-223ENST00000486991 CFAP100Q494V2 611 aa16.16■□□□□ 0.18
NR1H3-223ENST00000486991 ZNF804AQ7Z570 1209 aa16.16■□□□□ 0.18
NR1H3-223ENST00000486991 PRMT6Q96LA8 375 aaPredicted RBP16.16■□□□□ 0.18
NR1H3-223ENST00000486991 HMMRO75330 724 aa16.15■□□□□ 0.18
NR1H3-223ENST00000486991 FBXO33Q7Z6M2 555 aa16.15■□□□□ 0.18
NR1H3-223ENST00000486991 SIRT2Q8IXJ6 389 aa16.15■□□□□ 0.18
NR1H3-223ENST00000486991 TDRD7Q8NHU6 1098 aaKnown RBP16.15■□□□□ 0.18
NR1H3-223ENST00000486991 PPP4R2Q9NY27 417 aa16.15■□□□□ 0.18
NR1H3-223ENST00000486991 COL1A1P02452 1464 aaPredicted RBP16.15■□□□□ 0.18
NR1H3-223ENST00000486991 FAM205AQ6ZU69 1335 aa16.15■□□□□ 0.18
NR1H3-223ENST00000486991 PDE8BO95263 885 aa16.14■□□□□ 0.17
NR1H3-223ENST00000486991 METTL24Q5JXM2 366 aa16.14■□□□□ 0.17
NR1H3-223ENST00000486991 NBPF12Q5TAG4 269 aaPredicted RBP16.14■□□□□ 0.17
NR1H3-223ENST00000486991 SLC10A4Q96EP9 437 aa16.14■□□□□ 0.17
NR1H3-223ENST00000486991 VEZTQ9HBM0 779 aa16.14■□□□□ 0.17
NR1H3-223ENST00000486991 FKTNO75072 461 aa16.13■□□□□ 0.17
NR1H3-223ENST00000486991 HIBADHP31937 336 aaKnown RBP16.13■□□□□ 0.17
NR1H3-223ENST00000486991 FKBP1AP62942 108 aaKnown RBP16.13■□□□□ 0.17
NR1H3-223ENST00000486991 SREBF2Q12772 1141 aa16.13■□□□□ 0.17
NR1H3-223ENST00000486991 POLA2Q14181 598 aa16.13■□□□□ 0.17
NR1H3-223ENST00000486991 SSH3Q8TE77 659 aa16.13■□□□□ 0.17
NR1H3-223ENST00000486991 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
NR1H3-223ENST00000486991 RWDD1Q9H446 243 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-223ENST00000486991 PA2G4Q9UQ80 394 aaKnown RBP16.13■□□□□ 0.17
NR1H3-223ENST00000486991 HTTP42858 3142 aa16.12■□□□□ 0.17
NR1H3-223ENST00000486991 PDE4DIPQ5VU43 2346 aa16.12■□□□□ 0.17
NR1H3-223ENST00000486991 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
NR1H3-223ENST00000486991 IGF2BP3O00425 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
NR1H3-223ENST00000486991 CIAO1O76071 339 aa16.12■□□□□ 0.17
NR1H3-223ENST00000486991 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
NR1H3-223ENST00000486991 GJA5P36382 358 aa16.12■□□□□ 0.17
NR1H3-223ENST00000486991 RBM5P52756 815 aaKnown RBP eCLIP16.12■□□□□ 0.17
NR1H3-223ENST00000486991 MTMR14Q8NCE2 650 aa16.12■□□□□ 0.17
NR1H3-223ENST00000486991 WNK4Q96J92 1243 aa16.12■□□□□ 0.17
NR1H3-223ENST00000486991 COPRSQ9NQ92 184 aa16.12■□□□□ 0.17
NR1H3-223ENST00000486991 USP2O75604 605 aaPredicted RBP16.11■□□□□ 0.17
NR1H3-223ENST00000486991 IGHDP01880 384 aa16.11■□□□□ 0.17
NR1H3-223ENST00000486991 HDAC1Q13547 482 aaPredicted RBP16.11■□□□□ 0.17
NR1H3-223ENST00000486991 PUM3Q15397 648 aaKnown RBP16.11■□□□□ 0.17
NR1H3-223ENST00000486991 PKN2Q16513 984 aaKnown RBP16.11■□□□□ 0.17
NR1H3-223ENST00000486991 B4GALNT3Q6L9W6 998 aa16.11■□□□□ 0.17
NR1H3-223ENST00000486991 IFNL1Q8IU54 200 aa16.11■□□□□ 0.17
NR1H3-223ENST00000486991 CDAN1Q8IWY9 1227 aa16.11■□□□□ 0.17
NR1H3-223ENST00000486991 SIL1Q9H173 461 aa16.11■□□□□ 0.17
NR1H3-223ENST00000486991 FBXO3Q9UK99 471 aa16.11■□□□□ 0.17
NR1H3-223ENST00000486991 SURF6O75683 361 aaKnown RBP16.1■□□□□ 0.17
NR1H3-223ENST00000486991 RASA3Q14644 834 aa16.1■□□□□ 0.17
NR1H3-223ENST00000486991 GRIK5Q16478 980 aa16.1■□□□□ 0.17
NR1H3-223ENST00000486991 MAP3K11Q16584 847 aa16.1■□□□□ 0.17
NR1H3-223ENST00000486991 FBXO46Q6PJ61 603 aaPredicted RBP16.1■□□□□ 0.17
NR1H3-223ENST00000486991 IQSEC3Q9UPP2 1182 aaPredicted RBP16.1■□□□□ 0.17
NR1H3-223ENST00000486991 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.1■□□□□ 0.17
NR1H3-223ENST00000486991 MANSC4A6NHS7 340 aaPredicted RBP16.09■□□□□ 0.17
NR1H3-223ENST00000486991 PPP1R12BO60237 982 aaPredicted RBP16.09■□□□□ 0.17
NR1H3-223ENST00000486991 BCAMP50895 628 aa16.09■□□□□ 0.17
NR1H3-223ENST00000486991 OS9Q13438 667 aaPredicted RBP16.09■□□□□ 0.17
NR1H3-223ENST00000486991 NOM1Q5C9Z4 860 aaKnown RBP16.09■□□□□ 0.17
NR1H3-223ENST00000486991 CFHR5Q9BXR6 569 aa16.09■□□□□ 0.17
NR1H3-223ENST00000486991 TDRD3Q9H7E2 651 aaKnown RBP16.09■□□□□ 0.17
NR1H3-223ENST00000486991 EXOC6BQ9Y2D4 811 aa16.09■□□□□ 0.17
NR1H3-223ENST00000486991 OTOFQ9HC10 1997 aa16.09■□□□□ 0.17
NR1H3-223ENST00000486991 LAMB1P07942 1786 aa16.08■□□□□ 0.17
NR1H3-223ENST00000486991 MYO1BO43795 1136 aa16.08■□□□□ 0.16
NR1H3-223ENST00000486991 CAP1Q01518 475 aa16.08■□□□□ 0.16
NR1H3-223ENST00000486991 G3BP1Q13283 466 aaKnown RBP eCLIP16.08■□□□□ 0.16
NR1H3-223ENST00000486991 MFSD14BQ5SR56 506 aa16.08■□□□□ 0.16
NR1H3-223ENST00000486991 CNKSR2Q8WXI2 1034 aa16.08■□□□□ 0.16
NR1H3-223ENST00000486991 PTPN18Q99952 460 aa16.08■□□□□ 0.16
NR1H3-223ENST00000486991 ZNF70Q9UC06 446 aaPredicted RBP16.08■□□□□ 0.16
NR1H3-223ENST00000486991 TRIM17Q9Y577 477 aa16.08■□□□□ 0.16
NR1H3-223ENST00000486991 CENPFP49454 3210 aa16.07■□□□□ 0.16
NR1H3-223ENST00000486991 APBB1O00213 710 aa16.07■□□□□ 0.16
NR1H3-223ENST00000486991 IL15P40933 162 aaPredicted RBP16.07■□□□□ 0.16
NR1H3-223ENST00000486991 SUPT20HL1Q3ZLR7 823 aa16.07■□□□□ 0.16
NR1H3-223ENST00000486991 CAVIN4Q5BKX8 364 aa16.07■□□□□ 0.16
NR1H3-223ENST00000486991 VPS37DQ86XT2 251 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms