RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 TRPM7Q96QT4 1865 aa9.68□□□□□ -0.86
SORT1-205ENST00000483508 SPEF2Q9C093 1822 aa9.68□□□□□ -0.86
SORT1-205ENST00000483508 MYH15Q9Y2K3 1946 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 SYCE3A1L190 88 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 C6orf229H3BNL8 230 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 STX6O43752 255 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 TPM2P07951 284 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 ANKRD13DQ6ZTN6 518 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 NOL8Q76FK4 1167 aaKnown RBP9.67□□□□□ -0.86
SORT1-205ENST00000483508 AACSQ86V21 672 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 PLBD2Q8NHP8 589 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 SUCLG2Q96I99 432 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 ALDH8A1Q9H2A2 487 aaPredicted RBP9.67□□□□□ -0.86
SORT1-205ENST00000483508 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 PDRG1Q9NUG6 133 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 CNOT7Q9UIV1 285 aaKnown RBP9.67□□□□□ -0.86
SORT1-205ENST00000483508 NSFL1CQ9UNZ2 370 aaKnown RBP9.67□□□□□ -0.86
SORT1-205ENST00000483508 TLL2Q9Y6L7 1015 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 LTBP1Q14766 1721 aa9.67□□□□□ -0.86
SORT1-205ENST00000483508 CDHR2Q9BYE9 1310 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 F13A1P00488 732 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 HSP90B1P14625 803 aaKnown RBP9.66□□□□□ -0.86
SORT1-205ENST00000483508 CASTP20810 708 aaKnown RBP9.66□□□□□ -0.86
SORT1-205ENST00000483508 MAP2K2P36507 400 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 TERF1P54274 439 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 UBE2HP62256 183 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 NECTIN1Q15223 517 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 ANKRD1Q15327 319 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 CCDC183Q5T5S1 534 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 RNF20Q5VTR2 975 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 CST9Q5W186 159 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.66□□□□□ -0.86
SORT1-205ENST00000483508 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 CDC37L1Q7L3B6 337 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 RIC3Q7Z5B4 369 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 TICAM2Q86XR7 235 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 RASEFQ8IZ41 740 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 ZC3H15Q8WU90 426 aaKnown RBP9.66□□□□□ -0.86
SORT1-205ENST00000483508 FAM89AQ96GI7 184 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 EYA3Q99504 573 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 METTL22Q9BUU2 404 aaPredicted RBP9.66□□□□□ -0.86
SORT1-205ENST00000483508 GLIS2Q9BZE0 524 aaPredicted RBP9.66□□□□□ -0.86
SORT1-205ENST00000483508 HMG20BQ9P0W2 317 aa9.66□□□□□ -0.86
SORT1-205ENST00000483508 NOL7Q9UMY1 257 aaKnown RBP9.66□□□□□ -0.86
SORT1-205ENST00000483508 LAMB2P55268 1798 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 MED23Q9ULK4 1368 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 CCDC85CA6NKD9 419 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 ZNF500O60304 480 aaPredicted RBP9.65□□□□□ -0.86
SORT1-205ENST00000483508 AOC2O75106 756 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 SASH1O94885 1247 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 CWF19L2Q2TBE0 894 aaKnown RBP9.65□□□□□ -0.86
SORT1-205ENST00000483508 RBM26Q5T8P6 1007 aaKnown RBP9.65□□□□□ -0.86
SORT1-205ENST00000483508 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
SORT1-205ENST00000483508 USP48Q86UV5 1035 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 MICALL2Q8IY33 904 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
SORT1-205ENST00000483508 MAP4K1Q92918 833 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 ABHD8Q96I13 439 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 KAZALD1Q96I82 304 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 JAKMIP1Q96N16 626 aaKnown RBP9.65□□□□□ -0.86
SORT1-205ENST00000483508 BICC1Q9H694 974 aaKnown RBP9.65□□□□□ -0.86
SORT1-205ENST00000483508 DBNDD1Q9H9R9 158 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 LAMA4Q16363 1823 aa9.65□□□□□ -0.86
SORT1-205ENST00000483508 IRS4O14654 1257 aaPredicted RBP9.64□□□□□ -0.87
SORT1-205ENST00000483508 CA12O43570 354 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 OFD1O75665 1012 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 PDCP20941 246 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 SYT1P21579 422 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 PTH1RQ03431 593 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 GCKRQ14397 625 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 TSGA10IPQ3SY00 556 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 CREB3L3Q68CJ9 461 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 SAPCD2Q86UD0 394 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 DCPSQ96C86 337 aaKnown RBP9.64□□□□□ -0.87
SORT1-205ENST00000483508 ZC3H12CQ9C0D7 883 aaKnown RBP9.64□□□□□ -0.87
SORT1-205ENST00000483508 RNF39Q9H2S5 420 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 COPRSQ9NQ92 184 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 TSKSQ9UJT2 592 aa9.64□□□□□ -0.87
SORT1-205ENST00000483508 PA2G4Q9UQ80 394 aaKnown RBP9.64□□□□□ -0.87
SORT1-205ENST00000483508 ZBTB12Q9Y330 459 aaPredicted RBP9.64□□□□□ -0.87
SORT1-205ENST00000483508 RBM8AQ9Y5S9 174 aaKnown RBP9.64□□□□□ -0.87
SORT1-205ENST00000483508 PSMD14O00487 310 aa9.63□□□□□ -0.87
SORT1-205ENST00000483508 ECE2O60344 883 aa9.63□□□□□ -0.87
SORT1-205ENST00000483508 IGKV5-2P06315 115 aa9.63□□□□□ -0.87
SORT1-205ENST00000483508 KCNJ4P48050 445 aa9.63□□□□□ -0.87
SORT1-205ENST00000483508 GPSM2P81274 684 aa9.63□□□□□ -0.87
SORT1-205ENST00000483508 CACNB1Q02641 598 aaPredicted RBP9.63□□□□□ -0.87
SORT1-205ENST00000483508 NMIQ13287 307 aaPredicted RBP9.63□□□□□ -0.87
SORT1-205ENST00000483508 KRT32Q14532 448 aa9.63□□□□□ -0.87
SORT1-205ENST00000483508 SF3B3Q15393 1217 aaKnown RBP9.63□□□□□ -0.87
SORT1-205ENST00000483508 DOK7Q18PE1 504 aa9.63□□□□□ -0.87
SORT1-205ENST00000483508 RABL6Q3YEC7 729 aaPredicted RBP9.63□□□□□ -0.87
SORT1-205ENST00000483508 TBC1D10BQ4KMP7 808 aaPredicted RBP9.63□□□□□ -0.87
SORT1-205ENST00000483508 C2orf69Q8N8R5 385 aa9.63□□□□□ -0.87
SORT1-205ENST00000483508 TRPM4Q8TD43 1214 aa9.63□□□□□ -0.87
SORT1-205ENST00000483508 DPF2Q92785 391 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms