RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CETPP11597 493 aa17.03■□□□□ 0.32
NDC1-202ENST00000480952 LACTBP83111 547 aaPredicted RBP17.03■□□□□ 0.32
NDC1-202ENST00000480952 FLIIQ13045 1269 aa17.03■□□□□ 0.32
NDC1-202ENST00000480952 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
NDC1-202ENST00000480952 TWISTNBQ3B726 338 aaPredicted RBP17.03■□□□□ 0.32
NDC1-202ENST00000480952 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
NDC1-202ENST00000480952 DZIP1LQ8IYY4 767 aaKnown RBP17.03■□□□□ 0.32
NDC1-202ENST00000480952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.03■□□□□ 0.32
NDC1-202ENST00000480952 DNAAF4Q8WXU2 420 aa17.03■□□□□ 0.32
NDC1-202ENST00000480952 FAM205AQ6ZU69 1335 aa17.02■□□□□ 0.32
NDC1-202ENST00000480952 PRMT2P55345 433 aa17.02■□□□□ 0.32
NDC1-202ENST00000480952 FOXO4P98177 505 aa17.02■□□□□ 0.32
NDC1-202ENST00000480952 LDHAL6AQ6ZMR3 332 aa17.02■□□□□ 0.32
NDC1-202ENST00000480952 ECM2O94769 699 aaPredicted RBP17.01■□□□□ 0.31
NDC1-202ENST00000480952 CCDC57Q2TAC2 916 aa17.01■□□□□ 0.31
NDC1-202ENST00000480952 CNNM1Q9NRU3 951 aa17.01■□□□□ 0.31
NDC1-202ENST00000480952 RBM27Q9P2N5 1060 aaKnown RBP17.01■□□□□ 0.31
NDC1-202ENST00000480952 LAMB1P07942 1786 aa17.01■□□□□ 0.31
NDC1-202ENST00000480952 SPDYE5A6NIY4 337 aa17■□□□□ 0.31
NDC1-202ENST00000480952 BTBD19C9JJ37 291 aa17■□□□□ 0.31
NDC1-202ENST00000480952 HIBADHP31937 336 aaKnown RBP17■□□□□ 0.31
NDC1-202ENST00000480952 CRKP46108 304 aa17■□□□□ 0.31
NDC1-202ENST00000480952 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
NDC1-202ENST00000480952 ERO1BQ86YB8 467 aa17■□□□□ 0.31
NDC1-202ENST00000480952 TDRD7Q8NHU6 1098 aaKnown RBP17■□□□□ 0.31
NDC1-202ENST00000480952 ZNF594Q96JF6 807 aaPredicted RBP17■□□□□ 0.31
NDC1-202ENST00000480952 ZCCHC17Q9NP64 241 aaKnown RBP17■□□□□ 0.31
NDC1-202ENST00000480952 TRIOBPQ9H2D6 2365 aa17■□□□□ 0.31
NDC1-202ENST00000480952 SZT2Q5T011 3432 aa16.99■□□□□ 0.31
NDC1-202ENST00000480952 GYG1P46976 350 aa16.99■□□□□ 0.31
NDC1-202ENST00000480952 SNAPC2Q13487 334 aa16.99■□□□□ 0.31
NDC1-202ENST00000480952 MTFR1Q15390 333 aa16.99■□□□□ 0.31
NDC1-202ENST00000480952 NKX2-3Q8TAU0 364 aa16.99■□□□□ 0.31
NDC1-202ENST00000480952 CEP290O15078 2479 aa16.98■□□□□ 0.31
NDC1-202ENST00000480952 ECM29Q5VYK3 1845 aa16.98■□□□□ 0.31
NDC1-202ENST00000480952 IRF6O14896 467 aa16.98■□□□□ 0.31
NDC1-202ENST00000480952 SLC17A8Q8NDX2 589 aa16.98■□□□□ 0.31
NDC1-202ENST00000480952 ZKSCAN4Q969J2 545 aaPredicted RBP16.98■□□□□ 0.31
NDC1-202ENST00000480952 WRNIP1Q96S55 665 aa16.98■□□□□ 0.31
NDC1-202ENST00000480952 SNCAIPQ9Y6H5 919 aa16.98■□□□□ 0.31
NDC1-202ENST00000480952 DLL1O00548 723 aa16.97■□□□□ 0.31
NDC1-202ENST00000480952 HOXD10P28358 340 aa16.97■□□□□ 0.31
NDC1-202ENST00000480952 PSMC4P43686 418 aa16.97■□□□□ 0.31
NDC1-202ENST00000480952 UBE4AQ14139 1066 aa16.97■□□□□ 0.31
NDC1-202ENST00000480952 RAET1EQ8TD07 263 aa16.97■□□□□ 0.31
NDC1-202ENST00000480952 SHISA4Q96DD7 197 aa16.97■□□□□ 0.31
NDC1-202ENST00000480952 FAM84BQ96KN1 310 aaPredicted RBP16.97■□□□□ 0.31
NDC1-202ENST00000480952 HTATIP2Q9BUP3 242 aa16.97■□□□□ 0.31
NDC1-202ENST00000480952 SRRDQ9UH36 339 aa16.97■□□□□ 0.31
NDC1-202ENST00000480952 FMNL1O95466 1100 aaPredicted RBP16.96■□□□□ 0.31
NDC1-202ENST00000480952 CACNB3P54284 484 aa16.96■□□□□ 0.31
NDC1-202ENST00000480952 PPIL2Q13356 520 aa16.96■□□□□ 0.31
NDC1-202ENST00000480952 C17orf99Q6UX52 265 aa16.96■□□□□ 0.31
NDC1-202ENST00000480952 VPS37DQ86XT2 251 aa16.96■□□□□ 0.31
NDC1-202ENST00000480952 HOOK2Q96ED9 719 aa16.96■□□□□ 0.31
NDC1-202ENST00000480952 BIN2Q9UBW5 565 aaPredicted RBP16.96■□□□□ 0.31
NDC1-202ENST00000480952 CPA4Q9UI42 421 aa16.96■□□□□ 0.31
NDC1-202ENST00000480952 NR2E3Q9Y5X4 410 aa16.96■□□□□ 0.31
NDC1-202ENST00000480952 GRK4P32298 578 aa16.95■□□□□ 0.3
NDC1-202ENST00000480952 GJA8P48165 433 aa16.95■□□□□ 0.3
NDC1-202ENST00000480952 EPHA10Q5JZY3 1008 aa16.95■□□□□ 0.3
NDC1-202ENST00000480952 TEKT1Q969V4 418 aa16.95■□□□□ 0.3
NDC1-202ENST00000480952 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
NDC1-202ENST00000480952 TMOD2Q9NZR1 351 aa16.95■□□□□ 0.3
NDC1-202ENST00000480952 RIPOR2Q9Y4F9 1068 aa16.95■□□□□ 0.3
NDC1-202ENST00000480952 OTOFQ9HC10 1997 aa16.95■□□□□ 0.3
NDC1-202ENST00000480952 FRAT2O75474 233 aaPredicted RBP16.94■□□□□ 0.3
NDC1-202ENST00000480952 CCL5P13501 91 aa16.94■□□□□ 0.3
NDC1-202ENST00000480952 OSBPP22059 807 aa16.94■□□□□ 0.3
NDC1-202ENST00000480952 HDLBPQ00341 1268 aaKnown RBP16.94■□□□□ 0.3
NDC1-202ENST00000480952 CHAF1AQ13111 956 aaPredicted RBP16.94■□□□□ 0.3
NDC1-202ENST00000480952 GRIK5Q16478 980 aa16.94■□□□□ 0.3
NDC1-202ENST00000480952 BEND3Q5T5X7 828 aa16.94■□□□□ 0.3
NDC1-202ENST00000480952 TRIM47Q96LD4 638 aa16.94■□□□□ 0.3
NDC1-202ENST00000480952 RNF208Q9H0X6 261 aa16.94■□□□□ 0.3
NDC1-202ENST00000480952 F6X3S4 739 aa16.93■□□□□ 0.3
NDC1-202ENST00000480952 PDHXO00330 501 aa16.93■□□□□ 0.3
NDC1-202ENST00000480952 GJB1P08034 283 aa16.93■□□□□ 0.3
NDC1-202ENST00000480952 CTGFP29279 349 aa16.93■□□□□ 0.3
NDC1-202ENST00000480952 PPATQ06203 517 aa16.93■□□□□ 0.3
NDC1-202ENST00000480952 DCAF15Q66K64 600 aa16.93■□□□□ 0.3
NDC1-202ENST00000480952 WWC1Q8IX03 1113 aa16.93■□□□□ 0.3
NDC1-202ENST00000480952 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
NDC1-202ENST00000480952 TBC1D22AQ8WUA7 517 aa16.93■□□□□ 0.3
NDC1-202ENST00000480952 IQSEC3Q9UPP2 1182 aaPredicted RBP16.93■□□□□ 0.3
NDC1-202ENST00000480952 RANBP2P49792 3224 aaKnown RBP16.93■□□□□ 0.3
NDC1-202ENST00000480952 MYPNQ86TC9 1320 aa16.93■□□□□ 0.3
NDC1-202ENST00000480952 GRM8O00222 908 aa16.92■□□□□ 0.3
NDC1-202ENST00000480952 UBXN2AP68543 259 aa16.92■□□□□ 0.3
NDC1-202ENST00000480952 CCDC27Q2M243 656 aa16.92■□□□□ 0.3
NDC1-202ENST00000480952 MIGA2Q7L4E1 593 aa16.92■□□□□ 0.3
NDC1-202ENST00000480952 ANKRD23Q86SG2 305 aa16.92■□□□□ 0.3
NDC1-202ENST00000480952 FAM83AQ86UY5 434 aa16.92■□□□□ 0.3
NDC1-202ENST00000480952 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
NDC1-202ENST00000480952 CAVIN4Q5BKX8 364 aa16.91■□□□□ 0.3
NDC1-202ENST00000480952 FBXO33Q7Z6M2 555 aa16.91■□□□□ 0.3
NDC1-202ENST00000480952 UBE2Q1Q7Z7E8 422 aa16.91■□□□□ 0.3
NDC1-202ENST00000480952 ZDHHC15Q96MV8 337 aa16.91■□□□□ 0.3
NDC1-202ENST00000480952 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
NDC1-202ENST00000480952 PUS3Q9BZE2 481 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms