RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	CSRNP1	Q96S65	589 aa		18.72	■□□□□ 0.59
CCNL1-222	ENST00000479596	CEP126	Q9P2H0	1117 aa		18.72	■□□□□ 0.59
CCNL1-222	ENST00000479596	ZNF70	Q9UC06	446 aa	Predicted RBP	18.72	■□□□□ 0.59
CCNL1-222	ENST00000479596	SRGAP3	O43295	1099 aa		18.71	■□□□□ 0.59
CCNL1-222	ENST00000479596	LDLRAD1	Q5T700	205 aa		18.71	■□□□□ 0.59
CCNL1-222	ENST00000479596	TDRD3	Q9H7E2	651 aa	Known RBP	18.71	■□□□□ 0.59
CCNL1-222	ENST00000479596	ADORA1	P30542	326 aa		18.7	■□□□□ 0.58
CCNL1-222	ENST00000479596	HDLBP	Q00341	1268 aa	Known RBP	18.7	■□□□□ 0.58
CCNL1-222	ENST00000479596	RASA3	Q14644	834 aa		18.7	■□□□□ 0.58
CCNL1-222	ENST00000479596	MAP3K11	Q16584	847 aa		18.7	■□□□□ 0.58
CCNL1-222	ENST00000479596	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.7	■□□□□ 0.58
CCNL1-222	ENST00000479596	RNF186	Q9NXI6	227 aa		18.7	■□□□□ 0.58
CCNL1-222	ENST00000479596	SAGE1	Q9NXZ1	904 aa		18.7	■□□□□ 0.58
CCNL1-222	ENST00000479596	ANGEL1	Q9UNK9	670 aa	Known RBP	18.7	■□□□□ 0.58
CCNL1-222	ENST00000479596	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.7	■□□□□ 0.58
CCNL1-222	ENST00000479596	CAPN15	O75808	1086 aa		18.69	■□□□□ 0.58
CCNL1-222	ENST00000479596	GNAI2	P04899	355 aa		18.69	■□□□□ 0.58
CCNL1-222	ENST00000479596	ARMC9	Q7Z3E5	817 aa		18.69	■□□□□ 0.58
CCNL1-222	ENST00000479596	CDAN1	Q8IWY9	1227 aa		18.69	■□□□□ 0.58
CCNL1-222	ENST00000479596	TEPSIN	Q96N21	525 aa		18.69	■□□□□ 0.58
CCNL1-222	ENST00000479596	SUGT1	Q9Y2Z0	365 aa		18.69	■□□□□ 0.58
CCNL1-222	ENST00000479596	MYH13	Q9UKX3	1938 aa		18.68	■□□□□ 0.58
CCNL1-222	ENST00000479596	PNMA6E	A0A0J9YXQ4	647 aa		18.68	■□□□□ 0.58
CCNL1-222	ENST00000479596	RLBP1	P12271	317 aa		18.68	■□□□□ 0.58
CCNL1-222	ENST00000479596	PHKA1	P46020	1223 aa		18.68	■□□□□ 0.58
CCNL1-222	ENST00000479596	TEKT1	Q969V4	418 aa		18.68	■□□□□ 0.58
CCNL1-222	ENST00000479596	MRI	Q9BWK5	157 aa		18.68	■□□□□ 0.58
CCNL1-222	ENST00000479596	ZBTB22	O15209	634 aa		18.67	■□□□□ 0.58
CCNL1-222	ENST00000479596	TFCP2	Q12800	502 aa		18.67	■□□□□ 0.58
CCNL1-222	ENST00000479596	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.67	■□□□□ 0.58
CCNL1-222	ENST00000479596	WDR66	Q8TBY9	1149 aa		18.67	■□□□□ 0.58
CCNL1-222	ENST00000479596	ZDHHC15	Q96MV8	337 aa		18.67	■□□□□ 0.58
CCNL1-222	ENST00000479596	TCP10L2	B9ZVM9	353 aa		18.66	■□□□□ 0.58
CCNL1-222	ENST00000479596	TRPA1	O75762	1119 aa		18.66	■□□□□ 0.58
CCNL1-222	ENST00000479596	CACNB3	P54284	484 aa		18.66	■□□□□ 0.58
CCNL1-222	ENST00000479596	MKRN3	Q13064	507 aa	Known RBP	18.66	■□□□□ 0.58
CCNL1-222	ENST00000479596	TNFAIP1	Q13829	316 aa		18.66	■□□□□ 0.58
CCNL1-222	ENST00000479596	SUPT20HL1	Q3ZLR7	823 aa		18.66	■□□□□ 0.58
CCNL1-222	ENST00000479596	CCDC102B	Q68D86	513 aa		18.66	■□□□□ 0.58
CCNL1-222	ENST00000479596	REM2	Q8IYK8	340 aa	Predicted RBP	18.66	■□□□□ 0.58
CCNL1-222	ENST00000479596	CLMN	Q96JQ2	1002 aa		18.66	■□□□□ 0.58
CCNL1-222	ENST00000479596	TMEM39B	Q9GZU3	492 aa		18.66	■□□□□ 0.58
CCNL1-222	ENST00000479596	USP2	O75604	605 aa	Predicted RBP	18.65	■□□□□ 0.58
CCNL1-222	ENST00000479596	PRDX5	P30044	214 aa		18.65	■□□□□ 0.58
CCNL1-222	ENST00000479596	TIMM10	P62072	90 aa		18.65	■□□□□ 0.58
CCNL1-222	ENST00000479596	HHIPL2	Q6UWX4	724 aa		18.65	■□□□□ 0.58
CCNL1-222	ENST00000479596	MAST3	O60307	1309 aa		18.65	■□□□□ 0.58
CCNL1-222	ENST00000479596	SALL1	Q9NSC2	1324 aa		18.65	■□□□□ 0.58
CCNL1-222	ENST00000479596	OTOF	Q9HC10	1997 aa		18.64	■□□□□ 0.58
CCNL1-222	ENST00000479596	CASP8AP2	Q9UKL3	1982 aa		18.64	■□□□□ 0.58
CCNL1-222	ENST00000479596		A0A1B0GUL7	405 aa		18.64	■□□□□ 0.57
CCNL1-222	ENST00000479596	SEMA3E	O15041	775 aa		18.64	■□□□□ 0.57
CCNL1-222	ENST00000479596	PPP1R12B	O60237	982 aa	Predicted RBP	18.64	■□□□□ 0.57
CCNL1-222	ENST00000479596	TM4SF4	P48230	202 aa		18.64	■□□□□ 0.57
CCNL1-222	ENST00000479596	SPRYD7	Q5W111	196 aa		18.64	■□□□□ 0.57
CCNL1-222	ENST00000479596	GNL3L	Q9NVN8	582 aa	Known RBP	18.64	■□□□□ 0.57
CCNL1-222	ENST00000479596	AKAP11	Q9UKA4	1901 aa		18.64	■□□□□ 0.57
CCNL1-222	ENST00000479596	RASGRF1	Q13972	1273 aa		18.63	■□□□□ 0.57
CCNL1-222	ENST00000479596	POLA2	Q14181	598 aa		18.63	■□□□□ 0.57
CCNL1-222	ENST00000479596	DIXDC1	Q155Q3	683 aa		18.63	■□□□□ 0.57
CCNL1-222	ENST00000479596	FTSJ3	Q8IY81	847 aa	Known RBP	18.63	■□□□□ 0.57
CCNL1-222	ENST00000479596	XAGE2	Q96GT9	111 aa		18.63	■□□□□ 0.57
CCNL1-222	ENST00000479596	C1orf115	Q9H7X2	142 aa		18.63	■□□□□ 0.57
CCNL1-222	ENST00000479596	DENND2A	Q9ULE3	1009 aa		18.63	■□□□□ 0.57
CCNL1-222	ENST00000479596	LAMB1	P07942	1786 aa		18.63	■□□□□ 0.57
CCNL1-222	ENST00000479596	UNCX	A6NJT0	531 aa		18.62	■□□□□ 0.57
CCNL1-222	ENST00000479596	ZBTB7B	O15156	539 aa	Predicted RBP	18.62	■□□□□ 0.57
CCNL1-222	ENST00000479596	ABHD8	Q96I13	439 aa		18.62	■□□□□ 0.57
CCNL1-222	ENST00000479596	WNK4	Q96J92	1243 aa		18.62	■□□□□ 0.57
CCNL1-222	ENST00000479596	DAGLA	Q9Y4D2	1042 aa		18.62	■□□□□ 0.57
CCNL1-222	ENST00000479596	PDS5A	Q29RF7	1337 aa	Known RBP	18.61	■□□□□ 0.57
CCNL1-222	ENST00000479596	GJA5	P36382	358 aa		18.61	■□□□□ 0.57
CCNL1-222	ENST00000479596	IREB2	P48200	963 aa	Known RBP	18.61	■□□□□ 0.57
CCNL1-222	ENST00000479596	TNNI2	P48788	182 aa		18.61	■□□□□ 0.57
CCNL1-222	ENST00000479596	FKBP1C	Q5VVH2	108 aa		18.61	■□□□□ 0.57
CCNL1-222	ENST00000479596	ITPRIP	Q8IWB1	547 aa		18.61	■□□□□ 0.57
CCNL1-222	ENST00000479596	SSH3	Q8TE77	659 aa		18.61	■□□□□ 0.57
CCNL1-222	ENST00000479596	AKAP2	Q9Y2D5	859 aa		18.61	■□□□□ 0.57
CCNL1-222	ENST00000479596	LDHB	P07195	334 aa	Known RBP	18.6	■□□□□ 0.57
CCNL1-222	ENST00000479596	ATP8B2	P98198	1209 aa		18.6	■□□□□ 0.57
CCNL1-222	ENST00000479596	FAM83A	Q86UY5	434 aa		18.6	■□□□□ 0.57
CCNL1-222	ENST00000479596	SLC10A4	Q96EP9	437 aa		18.6	■□□□□ 0.57
CCNL1-222	ENST00000479596	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.59	■□□□□ 0.57
CCNL1-222	ENST00000479596	ZBTB48	P10074	688 aa	Predicted RBP	18.59	■□□□□ 0.57
CCNL1-222	ENST00000479596	SREBF2	Q12772	1141 aa		18.59	■□□□□ 0.57
CCNL1-222	ENST00000479596	MVP	Q14764	893 aa	Known RBP	18.59	■□□□□ 0.57
CCNL1-222	ENST00000479596	CDC42EP5	Q6NZY7	148 aa		18.59	■□□□□ 0.57
CCNL1-222	ENST00000479596	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	18.59	■□□□□ 0.57
CCNL1-222	ENST00000479596	ANKRD13A	Q8IZ07	590 aa		18.59	■□□□□ 0.57
CCNL1-222	ENST00000479596	PANK1	Q8TE04	598 aa		18.59	■□□□□ 0.57
CCNL1-222	ENST00000479596	MCOLN1	Q9GZU1	580 aa		18.59	■□□□□ 0.57
CCNL1-222	ENST00000479596	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.59	■□□□□ 0.57
CCNL1-222	ENST00000479596	TBC1D8	O95759	1140 aa		18.58	■□□□□ 0.56
CCNL1-222	ENST00000479596	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.58	■□□□□ 0.56
CCNL1-222	ENST00000479596	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	18.58	■□□□□ 0.56
CCNL1-222	ENST00000479596	NEUROD6	Q96NK8	337 aa		18.58	■□□□□ 0.56
CCNL1-222	ENST00000479596	TMOD2	Q9NZR1	351 aa		18.58	■□□□□ 0.56
CCNL1-222	ENST00000479596	GAK	O14976	1311 aa		18.57	■□□□□ 0.56
CCNL1-222	ENST00000479596	NFIA	Q12857	509 aa		18.57	■□□□□ 0.56
CCNL1-222	ENST00000479596	VGLL4	Q14135	290 aa		18.57	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms