RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 COL19A1Q14993 1142 aa7.23□□□□□ -1.25
CMSS1-204ENST00000479555 ZNF423Q2M1K9 1284 aa7.23□□□□□ -1.25
CMSS1-204ENST00000479555 EXOSC6Q5RKV6 272 aaKnown RBP7.23□□□□□ -1.25
CMSS1-204ENST00000479555 ALKBH2Q6NS38 261 aa7.23□□□□□ -1.25
CMSS1-204ENST00000479555 PHLDB3Q6NSJ2 640 aa7.23□□□□□ -1.25
CMSS1-204ENST00000479555 SOX17Q9H6I2 414 aaPredicted RBP7.23□□□□□ -1.25
CMSS1-204ENST00000479555 PRKAG2Q9UGJ0 569 aa7.23□□□□□ -1.25
CMSS1-204ENST00000479555 ACTL7BQ9Y614 415 aa7.23□□□□□ -1.25
CMSS1-204ENST00000479555 ADH5P11766 374 aa7.22□□□□□ -1.25
CMSS1-204ENST00000479555 NPR3P17342 541 aa7.22□□□□□ -1.25
CMSS1-204ENST00000479555 GRIA4P48058 902 aa7.22□□□□□ -1.25
CMSS1-204ENST00000479555 USPL1Q5W0Q7 1092 aa7.22□□□□□ -1.25
CMSS1-204ENST00000479555 ZFYVE28Q9HCC9 887 aa7.22□□□□□ -1.25
CMSS1-204ENST00000479555 A0A1W2PP55 124 aa7.21□□□□□ -1.26
CMSS1-204ENST00000479555 NFICP08651 508 aa7.21□□□□□ -1.26
CMSS1-204ENST00000479555 YBX3P16989 372 aaKnown RBP eCLIP7.21□□□□□ -1.26
CMSS1-204ENST00000479555 MAOBP27338 520 aa7.21□□□□□ -1.26
CMSS1-204ENST00000479555 PCDH1Q08174 1060 aa7.21□□□□□ -1.26
CMSS1-204ENST00000479555 ZAR1Q86SH2 424 aa7.21□□□□□ -1.26
CMSS1-204ENST00000479555 GJD3Q8N144 294 aa7.21□□□□□ -1.26
CMSS1-204ENST00000479555 CCDC82Q8N4S0 544 aa7.21□□□□□ -1.26
CMSS1-204ENST00000479555 GIMAP7Q8NHV1 300 aa7.21□□□□□ -1.26
CMSS1-204ENST00000479555 GATA6Q92908 595 aa7.21□□□□□ -1.26
CMSS1-204ENST00000479555 LGR6Q9HBX8 967 aa7.21□□□□□ -1.26
CMSS1-204ENST00000479555 A0A096LPE4 126 aa7.2□□□□□ -1.26
CMSS1-204ENST00000479555 A0A1W2PPZ6 126 aa7.2□□□□□ -1.26
CMSS1-204ENST00000479555 CYP26A1O43174 497 aa7.2□□□□□ -1.26
CMSS1-204ENST00000479555 FAM13AO94988 1023 aa7.2□□□□□ -1.26
CMSS1-204ENST00000479555 AKAP4Q5JQC9 854 aa7.2□□□□□ -1.26
CMSS1-204ENST00000479555 TP53INP2Q8IXH6 220 aa7.2□□□□□ -1.26
CMSS1-204ENST00000479555 TCF12Q99081 682 aa7.2□□□□□ -1.26
CMSS1-204ENST00000479555 LRRC4CQ9HCJ2 640 aa7.2□□□□□ -1.26
CMSS1-204ENST00000479555 FAM105AQ9NUU6 356 aa7.2□□□□□ -1.26
CMSS1-204ENST00000479555 DYNC1LI2O43237 492 aaPredicted RBP7.19□□□□□ -1.26
CMSS1-204ENST00000479555 ZNF765Q7L2R6 523 aa7.19□□□□□ -1.26
CMSS1-204ENST00000479555 DYMQ7RTS9 669 aa7.19□□□□□ -1.26
CMSS1-204ENST00000479555 VSIG10LQ86VR7 867 aa7.19□□□□□ -1.26
CMSS1-204ENST00000479555 EZH1Q92800 747 aaPredicted RBP7.19□□□□□ -1.26
CMSS1-204ENST00000479555 TRIM56Q9BRZ2 755 aaKnown RBP7.19□□□□□ -1.26
CMSS1-204ENST00000479555 LIN7BQ9HAP6 207 aa7.19□□□□□ -1.26
CMSS1-204ENST00000479555 USP5P45974 858 aa7.18□□□□□ -1.26
CMSS1-204ENST00000479555 FKBP4Q02790 459 aaKnown RBP eCLIP7.18□□□□□ -1.26
CMSS1-204ENST00000479555 EHHADHQ08426 723 aa7.18□□□□□ -1.26
CMSS1-204ENST00000479555 POU4F3Q15319 338 aa7.18□□□□□ -1.26
CMSS1-204ENST00000479555 C14orf37Q86TY3 774 aa7.18□□□□□ -1.26
CMSS1-204ENST00000479555 CCNJLQ8IV13 435 aa7.18□□□□□ -1.26
CMSS1-204ENST00000479555 KRTAP4-9Q9BYQ8 210 aa7.18□□□□□ -1.26
CMSS1-204ENST00000479555 CLEC4MQ9H2X3 399 aaPredicted RBP7.18□□□□□ -1.26
CMSS1-204ENST00000479555 ZC3H7BQ9UGR2 993 aaKnown RBP7.18□□□□□ -1.26
CMSS1-204ENST00000479555 AP4E1Q9UPM8 1137 aa7.18□□□□□ -1.26
CMSS1-204ENST00000479555 PRNPP04156 253 aa7.17□□□□□ -1.26
CMSS1-204ENST00000479555 CBLL1Q75N03 491 aa7.17□□□□□ -1.26
CMSS1-204ENST00000479555 FLCNQ8NFG4 579 aa7.17□□□□□ -1.26
CMSS1-204ENST00000479555 METTL22Q9BUU2 404 aaPredicted RBP7.17□□□□□ -1.26
CMSS1-204ENST00000479555 SEMA6CQ9H3T2 930 aa7.17□□□□□ -1.26
CMSS1-204ENST00000479555 OGFOD2Q6N063 350 aa7.16□□□□□ -1.26
CMSS1-204ENST00000479555 ZNF574Q6ZN55 896 aaPredicted RBP7.16□□□□□ -1.26
CMSS1-204ENST00000479555 C1orf115Q9H7X2 142 aa7.16□□□□□ -1.26
CMSS1-204ENST00000479555 PAK6Q9NQU5 681 aaPredicted RBP7.16□□□□□ -1.26
CMSS1-204ENST00000479555 BSDC1Q9NW68 430 aaPredicted RBP7.16□□□□□ -1.26
CMSS1-204ENST00000479555 ORC1Q13415 861 aa7.15□□□□□ -1.26
CMSS1-204ENST00000479555 SF3B2Q13435 895 aaKnown RBP7.15□□□□□ -1.26
CMSS1-204ENST00000479555 CPSF6Q16630 551 aaKnown RBP eCLIP7.15□□□□□ -1.26
CMSS1-204ENST00000479555 GALNT12Q8IXK2 581 aa7.15□□□□□ -1.26
CMSS1-204ENST00000479555 YIPF2Q9BWQ6 316 aa7.15□□□□□ -1.26
CMSS1-204ENST00000479555 KRTAP4-2Q9BYR5 136 aa7.15□□□□□ -1.26
CMSS1-204ENST00000479555 ACSS3Q9H6R3 686 aa7.15□□□□□ -1.26
CMSS1-204ENST00000479555 RAD18Q9NS91 495 aa7.15□□□□□ -1.26
CMSS1-204ENST00000479555 DAGLAQ9Y4D2 1042 aa7.15□□□□□ -1.26
CMSS1-204ENST00000479555 ASPAP45381 313 aa7.14□□□□□ -1.27
CMSS1-204ENST00000479555 FBXL18Q96ME1 805 aa7.14□□□□□ -1.27
CMSS1-204ENST00000479555 CYP11A1P05108 521 aa7.13□□□□□ -1.27
CMSS1-204ENST00000479555 SERPINB4P48594 390 aa7.13□□□□□ -1.27
CMSS1-204ENST00000479555 MAP7Q14244 749 aa7.13□□□□□ -1.27
CMSS1-204ENST00000479555 PDE3AQ14432 1141 aa7.13□□□□□ -1.27
CMSS1-204ENST00000479555 CORO1BQ9BR76 489 aa7.13□□□□□ -1.27
CMSS1-204ENST00000479555 ZNF576Q9H609 170 aa7.13□□□□□ -1.27
CMSS1-204ENST00000479555 NPHS2Q9NP85 383 aa7.13□□□□□ -1.27
CMSS1-204ENST00000479555 C1GALT1Q9NS00 363 aa7.13□□□□□ -1.27
CMSS1-204ENST00000479555 PPP1R9AQ9ULJ8 1098 aa7.13□□□□□ -1.27
CMSS1-204ENST00000479555 TIMELESSQ9UNS1 1208 aa7.13□□□□□ -1.27
CMSS1-204ENST00000479555 H3BRB1 525 aa7.12□□□□□ -1.27
CMSS1-204ENST00000479555 B3GALT4O96024 378 aa7.12□□□□□ -1.27
CMSS1-204ENST00000479555 ZNF157P51786 506 aaPredicted RBP7.12□□□□□ -1.27
CMSS1-204ENST00000479555 FZD5Q13467 585 aa7.12□□□□□ -1.27
CMSS1-204ENST00000479555 DUSP27Q5VZP5 1158 aa7.12□□□□□ -1.27
CMSS1-204ENST00000479555 SEZ6L2Q6UXD5 910 aa7.12□□□□□ -1.27
CMSS1-204ENST00000479555 WFDC3Q8IUB2 231 aa7.12□□□□□ -1.27
CMSS1-204ENST00000479555 WDR89Q96FK6 387 aaPredicted RBP7.12□□□□□ -1.27
CMSS1-204ENST00000479555 WDR18Q9BV38 432 aa7.12□□□□□ -1.27
CMSS1-204ENST00000479555 ZC3H12CQ9C0D7 883 aaKnown RBP7.12□□□□□ -1.27
CMSS1-204ENST00000479555 TUT1Q9H6E5 874 aaKnown RBP7.12□□□□□ -1.27
CMSS1-204ENST00000479555 AOC2O75106 756 aa7.11□□□□□ -1.27
CMSS1-204ENST00000479555 ITGB5P18084 799 aa7.11□□□□□ -1.27
CMSS1-204ENST00000479555 LIG1P18858 919 aa7.11□□□□□ -1.27
CMSS1-204ENST00000479555 CDK5R2Q13319 367 aa7.11□□□□□ -1.27
CMSS1-204ENST00000479555 ECM1Q16610 540 aa7.11□□□□□ -1.27
CMSS1-204ENST00000479555 SPRED2Q7Z698 418 aa7.11□□□□□ -1.27
CMSS1-204ENST00000479555 FAM181AQ8N9Y4 354 aa7.11□□□□□ -1.27
CMSS1-204ENST00000479555 EHD4Q9H223 541 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms