RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-211	ENST00000478582	IFIT2	P09913	472 aa	Known RBP	32.82	■■■□□ 2.84
CCM2-211	ENST00000478582	KIAA0825	Q8IV33	1275 aa		32.82	■■■□□ 2.84
CCM2-211	ENST00000478582	SULF1	Q8IWU6	871 aa		32.82	■■■□□ 2.84
CCM2-211	ENST00000478582	ZNF408	Q9H9D4	720 aa		32.82	■■■□□ 2.84
CCM2-211	ENST00000478582	SUGT1	Q9Y2Z0	365 aa		32.82	■■■□□ 2.84
CCM2-211	ENST00000478582	SALL1	Q9NSC2	1324 aa		32.81	■■■□□ 2.84
CCM2-211	ENST00000478582	IGHD	P01880	384 aa		32.81	■■■□□ 2.84
CCM2-211	ENST00000478582	TTC39A	Q5SRH9	613 aa		32.81	■■■□□ 2.84
CCM2-211	ENST00000478582	ANGEL2	Q5VTE6	544 aa	Known RBP	32.81	■■■□□ 2.84
CCM2-211	ENST00000478582	DLK2	Q6UY11	383 aa		32.81	■■■□□ 2.84
CCM2-211	ENST00000478582	ADM5	C9JUS6	153 aa		32.8	■■■□□ 2.84
CCM2-211	ENST00000478582	SMARCA5	O60264	1052 aa	Predicted RBP	32.8	■■■□□ 2.84
CCM2-211	ENST00000478582	SAPCD2	Q86UD0	394 aa		32.8	■■■□□ 2.84
CCM2-211	ENST00000478582	SMC5	Q8IY18	1101 aa		32.8	■■■□□ 2.84
CCM2-211	ENST00000478582	HMG20B	Q9P0W2	317 aa		32.8	■■■□□ 2.84
CCM2-211	ENST00000478582	HDAC9	Q9UKV0	1011 aa		32.8	■■■□□ 2.84
CCM2-211	ENST00000478582	SPATA5	Q8NB90	893 aa		32.79	■■■□□ 2.84
CCM2-211	ENST00000478582	MYH13	Q9UKX3	1938 aa		32.79	■■■□□ 2.84
CCM2-211	ENST00000478582	PITPNM2	Q9BZ72	1349 aa		32.78	■■■□□ 2.84
CCM2-211	ENST00000478582	WDR33	Q9C0J8	1336 aa	Known RBP	32.78	■■■□□ 2.84
CCM2-211	ENST00000478582	HSPA1A	P0DMV8	641 aa	Known RBP	32.78	■■■□□ 2.84
CCM2-211	ENST00000478582	HSPA1B	P0DMV9	641 aa	Known RBP	32.78	■■■□□ 2.84
CCM2-211	ENST00000478582	MCAM	P43121	646 aa		32.78	■■■□□ 2.84
CCM2-211	ENST00000478582	NBPF9	Q3BBW0	867 aa		32.78	■■■□□ 2.84
CCM2-211	ENST00000478582	IFFO2	Q5TF58	517 aa		32.78	■■■□□ 2.84
CCM2-211	ENST00000478582	WNT10B	O00744	389 aa		32.77	■■■□□ 2.84
CCM2-211	ENST00000478582	ECE1	P42892	770 aa		32.76	■■■□□ 2.83
CCM2-211	ENST00000478582	GRIK5	Q16478	980 aa		32.76	■■■□□ 2.83
CCM2-211	ENST00000478582	ZGPAT	Q8N5A5	531 aa	Known RBP	32.76	■■■□□ 2.83
CCM2-211	ENST00000478582	HHIPL1	Q96JK4	782 aa		32.76	■■■□□ 2.83
CCM2-211	ENST00000478582	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.75	■■■□□ 2.83
CCM2-211	ENST00000478582	CAPNS2	Q96L46	248 aa		32.75	■■■□□ 2.83
CCM2-211	ENST00000478582	MRI	Q9BWK5	157 aa		32.75	■■■□□ 2.83
CCM2-211	ENST00000478582	TTF2	Q9UNY4	1162 aa	Known RBP	32.75	■■■□□ 2.83
CCM2-211	ENST00000478582	PCNT	O95613	3336 aa		32.75	■■■□□ 2.83
CCM2-211	ENST00000478582		F8W031	263 aa	Predicted RBP	32.74	■■■□□ 2.83
CCM2-211	ENST00000478582	HDLBP	Q00341	1268 aa	Known RBP	32.74	■■■□□ 2.83
CCM2-211	ENST00000478582	MTMR14	Q8NCE2	650 aa		32.74	■■■□□ 2.83
CCM2-211	ENST00000478582	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	32.74	■■■□□ 2.83
CCM2-211	ENST00000478582	ANKRD45	Q5TZF3	282 aa		32.73	■■■□□ 2.83
CCM2-211	ENST00000478582	CYP4F22	Q6NT55	531 aa		32.73	■■■□□ 2.83
CCM2-211	ENST00000478582	PI16	Q6UXB8	463 aa		32.73	■■■□□ 2.83
CCM2-211	ENST00000478582	ZBED3	Q96IU2	234 aa	Predicted RBP	32.73	■■■□□ 2.83
CCM2-211	ENST00000478582	SERPINA10	Q9UK55	444 aa		32.73	■■■□□ 2.83
CCM2-211	ENST00000478582	CDCA5	Q96FF9	252 aa		32.72	■■■□□ 2.83
CCM2-211	ENST00000478582	GBA2	Q9HCG7	927 aa	Predicted RBP	32.72	■■■□□ 2.83
CCM2-211	ENST00000478582	MAST3	O60307	1309 aa		32.72	■■■□□ 2.83
CCM2-211	ENST00000478582	SPTY2D1	Q68D10	685 aa	Predicted RBP	32.71	■■■□□ 2.83
CCM2-211	ENST00000478582	C2orf69	Q8N8R5	385 aa		32.71	■■■□□ 2.83
CCM2-211	ENST00000478582	BCL11A	Q9H165	835 aa		32.71	■■■□□ 2.83
CCM2-211	ENST00000478582	LDHB	P07195	334 aa	Known RBP	32.7	■■■□□ 2.83
CCM2-211	ENST00000478582	NEFL	P07196	543 aa		32.7	■■■□□ 2.83
CCM2-211	ENST00000478582	PRDX5	P30044	214 aa		32.7	■■■□□ 2.83
CCM2-211	ENST00000478582	ZBTB47	Q9UFB7	747 aa	Predicted RBP	32.7	■■■□□ 2.83
CCM2-211	ENST00000478582	AKAP11	Q9UKA4	1901 aa		32.7	■■■□□ 2.83
CCM2-211	ENST00000478582	ATP5J	P18859	108 aa		32.69	■■■□□ 2.82
CCM2-211	ENST00000478582	DLGAP5	Q15398	846 aa		32.69	■■■□□ 2.82
CCM2-211	ENST00000478582	SNRK	Q9NRH2	765 aa		32.69	■■■□□ 2.82
CCM2-211	ENST00000478582	CYP2E1	P05181	493 aa	Predicted RBP	32.68	■■■□□ 2.82
CCM2-211	ENST00000478582	ZAP70	P43403	619 aa		32.68	■■■□□ 2.82
CCM2-211	ENST00000478582	HUNK	P57058	714 aa		32.68	■■■□□ 2.82
CCM2-211	ENST00000478582	GRM1	Q13255	1194 aa		32.68	■■■□□ 2.82
CCM2-211	ENST00000478582	CFAP100	Q494V2	611 aa		32.68	■■■□□ 2.82
CCM2-211	ENST00000478582	ABCF2	Q9UG63	623 aa		32.68	■■■□□ 2.82
CCM2-211	ENST00000478582	IGSF3	O75054	1194 aa		32.67	■■■□□ 2.82
CCM2-211	ENST00000478582	CRK	P46108	304 aa		32.67	■■■□□ 2.82
CCM2-211	ENST00000478582	WBP1L	Q9NX94	342 aa		32.67	■■■□□ 2.82
CCM2-211	ENST00000478582	SCAF8	Q9UPN6	1271 aa	Known RBP	32.67	■■■□□ 2.82
CCM2-211	ENST00000478582	MAP2K1	Q02750	393 aa	Predicted RBP	32.66	■■■□□ 2.82
CCM2-211	ENST00000478582	HHIPL2	Q6UWX4	724 aa		32.66	■■■□□ 2.82
CCM2-211	ENST00000478582	TBC1D9	Q6ZT07	1266 aa		32.66	■■■□□ 2.82
CCM2-211	ENST00000478582	ERICH6	Q7L0X2	663 aa		32.66	■■■□□ 2.82
CCM2-211	ENST00000478582	ECHDC1	Q9NTX5	307 aa		32.66	■■■□□ 2.82
CCM2-211	ENST00000478582	SPDYE2B	A6NHP3	402 aa		32.65	■■■□□ 2.82
CCM2-211	ENST00000478582	SPDYE6	P0CI01	402 aa		32.65	■■■□□ 2.82
CCM2-211	ENST00000478582	NUCB1	Q02818	461 aa		32.65	■■■□□ 2.82
CCM2-211	ENST00000478582	TEKT1	Q969V4	418 aa		32.65	■■■□□ 2.82
CCM2-211	ENST00000478582	GPATCH3	Q96I76	525 aa		32.65	■■■□□ 2.82
CCM2-211	ENST00000478582	MAP2K2	P36507	400 aa		32.64	■■■□□ 2.82
CCM2-211	ENST00000478582	APOBEC3F	Q8IUX4	373 aa	Known RBP	32.64	■■■□□ 2.82
CCM2-211	ENST00000478582	PRMT6	Q96LA8	375 aa	Predicted RBP	32.64	■■■□□ 2.82
CCM2-211	ENST00000478582	TTC41P	Q6P2S7	1318 aa		32.63	■■■□□ 2.81
CCM2-211	ENST00000478582	SALL3	Q9BXA9	1300 aa		32.63	■■■□□ 2.81
CCM2-211	ENST00000478582	RBM5	P52756	815 aa	Known RBP eCLIP	32.63	■■■□□ 2.81
CCM2-211	ENST00000478582	B4GALNT3	Q6L9W6	998 aa		32.63	■■■□□ 2.81
CCM2-211	ENST00000478582	CHD1L	Q86WJ1	897 aa		32.63	■■■□□ 2.81
CCM2-211	ENST00000478582	AIDA	Q96BJ3	306 aa		32.63	■■■□□ 2.81
CCM2-211	ENST00000478582	ZDHHC15	Q96MV8	337 aa		32.63	■■■□□ 2.81
CCM2-211	ENST00000478582	PCDHAC2	Q9Y5I4	1007 aa		32.63	■■■□□ 2.81
CCM2-211	ENST00000478582	THSD7B	Q9C0I4	1608 aa		32.62	■■■□□ 2.81
CCM2-211	ENST00000478582	FKBP1B	P68106	108 aa		32.62	■■■□□ 2.81
CCM2-211	ENST00000478582	LRP2BP	Q9P2M1	347 aa		32.62	■■■□□ 2.81
CCM2-211	ENST00000478582	FOXN1	O15353	648 aa		32.61	■■■□□ 2.81
CCM2-211	ENST00000478582	AOC2	O75106	756 aa		32.61	■■■□□ 2.81
CCM2-211	ENST00000478582	PRAMEF18	Q5VWM3	479 aa		32.61	■■■□□ 2.81
CCM2-211	ENST00000478582	RGMB	Q6NW40	437 aa		32.61	■■■□□ 2.81
CCM2-211	ENST00000478582	DZIP1	Q86YF9	867 aa	Known RBP	32.61	■■■□□ 2.81
CCM2-211	ENST00000478582	OTUD7A	Q8TE49	926 aa	Predicted RBP	32.61	■■■□□ 2.81
CCM2-211	ENST00000478582	FAM163A	Q96GL9	167 aa	Predicted RBP	32.61	■■■□□ 2.81
CCM2-211	ENST00000478582	HAUS7	Q99871	368 aa		32.61	■■■□□ 2.81

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