RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 ANKRD44Q8N8A2 993 aa16.48■□□□□ 0.23
PABPC4-212ENST00000477556 IQSEC3Q9UPP2 1182 aaPredicted RBP16.48■□□□□ 0.23
PABPC4-212ENST00000477556 PDE8BO95263 885 aa16.47■□□□□ 0.23
PABPC4-212ENST00000477556 HDLBPQ00341 1268 aaKnown RBP16.47■□□□□ 0.23
PABPC4-212ENST00000477556 SSH1Q8WYL5 1049 aa16.47■□□□□ 0.23
PABPC4-212ENST00000477556 PDE4DIPQ5VU43 2346 aa16.46■□□□□ 0.23
PABPC4-212ENST00000477556 TCP10L2B9ZVM9 353 aa16.46■□□□□ 0.23
PABPC4-212ENST00000477556 IGF2BP3O00425 579 aaKnown RBP eCLIP16.46■□□□□ 0.23
PABPC4-212ENST00000477556 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
PABPC4-212ENST00000477556 IFIT1P09914 478 aaKnown RBP16.45■□□□□ 0.22
PABPC4-212ENST00000477556 GJA5P36382 358 aa16.45■□□□□ 0.22
PABPC4-212ENST00000477556 VGLL2Q8N8G2 317 aa16.45■□□□□ 0.22
PABPC4-212ENST00000477556 TEKT1Q969V4 418 aa16.45■□□□□ 0.22
PABPC4-212ENST00000477556 OPTNQ96CV9 577 aa16.45■□□□□ 0.22
PABPC4-212ENST00000477556 TEPSINQ96N21 525 aa16.45■□□□□ 0.22
PABPC4-212ENST00000477556 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
PABPC4-212ENST00000477556 ELP3Q9H9T3 547 aa16.45■□□□□ 0.22
PABPC4-212ENST00000477556 TRIM17Q9Y577 477 aa16.45■□□□□ 0.22
PABPC4-212ENST00000477556 TESPA1A2RU30 521 aaPredicted RBP16.44■□□□□ 0.22
PABPC4-212ENST00000477556 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
PABPC4-212ENST00000477556 PUM3Q15397 648 aaKnown RBP16.44■□□□□ 0.22
PABPC4-212ENST00000477556 GRIK5Q16478 980 aa16.44■□□□□ 0.22
PABPC4-212ENST00000477556 KLHDC4Q8TBB5 520 aa16.44■□□□□ 0.22
PABPC4-212ENST00000477556 ERO1AQ96HE7 468 aa16.44■□□□□ 0.22
PABPC4-212ENST00000477556 TMEM39BQ9GZU3 492 aa16.44■□□□□ 0.22
PABPC4-212ENST00000477556 TMOD2Q9NZR1 351 aa16.44■□□□□ 0.22
PABPC4-212ENST00000477556 MAST3O60307 1309 aa16.44■□□□□ 0.22
PABPC4-212ENST00000477556 KIF16BQ96L93 1317 aa16.44■□□□□ 0.22
PABPC4-212ENST00000477556 BCAMP50895 628 aa16.43■□□□□ 0.22
PABPC4-212ENST00000477556 MAP3K9P80192 1104 aa16.43■□□□□ 0.22
PABPC4-212ENST00000477556 CRHR2Q13324 411 aa16.43■□□□□ 0.22
PABPC4-212ENST00000477556 ALDH1L2Q3SY69 923 aa16.43■□□□□ 0.22
PABPC4-212ENST00000477556 OTOP1Q7RTM1 612 aa16.43■□□□□ 0.22
PABPC4-212ENST00000477556 CDAN1Q8IWY9 1227 aa16.43■□□□□ 0.22
PABPC4-212ENST00000477556 SUGT1Q9Y2Z0 365 aa16.43■□□□□ 0.22
PABPC4-212ENST00000477556 CSADQ9Y600 493 aa16.43■□□□□ 0.22
PABPC4-212ENST00000477556 EYA2O00167 538 aa16.42■□□□□ 0.22
PABPC4-212ENST00000477556 SLC5A1P13866 664 aa16.42■□□□□ 0.22
PABPC4-212ENST00000477556 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.42■□□□□ 0.22
PABPC4-212ENST00000477556 HOOK2Q96ED9 719 aa16.42■□□□□ 0.22
PABPC4-212ENST00000477556 ZDHHC15Q96MV8 337 aa16.42■□□□□ 0.22
PABPC4-212ENST00000477556 MRIQ9BWK5 157 aa16.42■□□□□ 0.22
PABPC4-212ENST00000477556 SMC4Q9NTJ3 1288 aa16.42■□□□□ 0.22
PABPC4-212ENST00000477556 LAMB1P07942 1786 aa16.41■□□□□ 0.22
PABPC4-212ENST00000477556 FGFR2P21802 821 aa16.41■□□□□ 0.22
PABPC4-212ENST00000477556 VGLL4Q14135 290 aa16.41■□□□□ 0.22
PABPC4-212ENST00000477556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.41■□□□□ 0.22
PABPC4-212ENST00000477556 PTPN18Q99952 460 aa16.41■□□□□ 0.22
PABPC4-212ENST00000477556 GTF2A2P52657 109 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 CACNB3P54284 484 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 SP3Q02447 781 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 FKBP1CQ5VVH2 108 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 FAM83AQ86UY5 434 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 WDR66Q8TBY9 1149 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 CD99L2Q8TCZ2 262 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 LPIN2Q92539 896 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 MS4A4AQ96JQ5 239 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 EFCC1Q9HA90 598 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 OTOFQ9HC10 1997 aa16.4■□□□□ 0.22
PABPC4-212ENST00000477556 CCL15-CCL14A0A0B4J2E2 113 aa16.39■□□□□ 0.21
PABPC4-212ENST00000477556 UBTFL1P0CB47 393 aaPredicted RBP16.39■□□□□ 0.21
PABPC4-212ENST00000477556 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
PABPC4-212ENST00000477556 CCL15Q16663 113 aa16.39■□□□□ 0.21
PABPC4-212ENST00000477556 PRPF38BQ5VTL8 546 aaKnown RBP16.39■□□□□ 0.21
PABPC4-212ENST00000477556 INTS3Q68E01 1043 aaKnown RBP16.39■□□□□ 0.21
PABPC4-212ENST00000477556 APOBEC3HQ6NTF7 200 aaKnown RBP16.39■□□□□ 0.21
PABPC4-212ENST00000477556 HHIPL2Q6UWX4 724 aa16.39■□□□□ 0.21
PABPC4-212ENST00000477556 CNKSR2Q8WXI2 1034 aa16.39■□□□□ 0.21
PABPC4-212ENST00000477556 BRI3BPQ8WY22 251 aa16.39■□□□□ 0.21
PABPC4-212ENST00000477556 OTUD5Q96G74 571 aa16.39■□□□□ 0.21
PABPC4-212ENST00000477556 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
PABPC4-212ENST00000477556 SPDYE5A6NIY4 337 aa16.38■□□□□ 0.21
PABPC4-212ENST00000477556 WDHD1O75717 1129 aaPredicted RBP16.38■□□□□ 0.21
PABPC4-212ENST00000477556 ARHGEF6Q15052 776 aa16.38■□□□□ 0.21
PABPC4-212ENST00000477556 TAF1CQ15572 869 aaPredicted RBP16.38■□□□□ 0.21
PABPC4-212ENST00000477556 DCAF15Q66K64 600 aa16.38■□□□□ 0.21
PABPC4-212ENST00000477556 CDCA7LQ96GN5 454 aa16.38■□□□□ 0.21
PABPC4-212ENST00000477556 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
PABPC4-212ENST00000477556 HDAC5Q9UQL6 1122 aa16.38■□□□□ 0.21
PABPC4-212ENST00000477556 PTPN22Q9Y2R2 807 aa16.38■□□□□ 0.21
PABPC4-212ENST00000477556 CT47B1P0C2W7 299 aaPredicted RBP16.37■□□□□ 0.21
PABPC4-212ENST00000477556 ERO1BQ86YB8 467 aa16.37■□□□□ 0.21
PABPC4-212ENST00000477556 WRNIP1Q96S55 665 aa16.37■□□□□ 0.21
PABPC4-212ENST00000477556 GNL3LQ9NVN8 582 aaKnown RBP16.37■□□□□ 0.21
PABPC4-212ENST00000477556 CEP126Q9P2H0 1117 aa16.37■□□□□ 0.21
PABPC4-212ENST00000477556 RPAP1Q9BWH6 1393 aaPredicted RBP16.37■□□□□ 0.21
PABPC4-212ENST00000477556 CIAO1O76071 339 aa16.36■□□□□ 0.21
PABPC4-212ENST00000477556 ATP2B3Q16720 1220 aa16.36■□□□□ 0.21
PABPC4-212ENST00000477556 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
PABPC4-212ENST00000477556 API5Q9BZZ5 524 aaKnown RBP16.36■□□□□ 0.21
PABPC4-212ENST00000477556 SIL1Q9H173 461 aa16.36■□□□□ 0.21
PABPC4-212ENST00000477556 SNCAIPQ9Y6H5 919 aa16.36■□□□□ 0.21
PABPC4-212ENST00000477556 CETPP11597 493 aa16.35■□□□□ 0.21
PABPC4-212ENST00000477556 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
PABPC4-212ENST00000477556 ZNF341Q9BYN7 854 aa16.35■□□□□ 0.21
PABPC4-212ENST00000477556 PCDH10Q9P2E7 1040 aa16.35■□□□□ 0.21
PABPC4-212ENST00000477556 NOB1Q9ULX3 412 aaKnown RBP16.35■□□□□ 0.21
PABPC4-212ENST00000477556 IL15P40933 162 aaPredicted RBP16.34■□□□□ 0.21
PABPC4-212ENST00000477556 PPIL2Q13356 520 aa16.34■□□□□ 0.21
PABPC4-212ENST00000477556 SNAPC2Q13487 334 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms