RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 FTSJ3Q8IY81 847 aaKnown RBP20.17■□□□□ 0.82
COL1A1-205ENST00000476387 TNNQ9UQP3 1299 aa20.17■□□□□ 0.82
COL1A1-205ENST00000476387 AOX1Q06278 1338 aa20.17■□□□□ 0.82
COL1A1-205ENST00000476387 FRAT2O75474 233 aaPredicted RBP20.16■□□□□ 0.82
COL1A1-205ENST00000476387 IFIT1P09914 478 aaKnown RBP20.16■□□□□ 0.82
COL1A1-205ENST00000476387 HDLBPQ00341 1268 aaKnown RBP20.16■□□□□ 0.82
COL1A1-205ENST00000476387 RASA3Q14644 834 aa20.16■□□□□ 0.82
COL1A1-205ENST00000476387 SPRYD7Q5W111 196 aa20.16■□□□□ 0.82
COL1A1-205ENST00000476387 ZNF70Q9UC06 446 aaPredicted RBP20.16■□□□□ 0.82
COL1A1-205ENST00000476387 FBXO3Q9UK99 471 aa20.16■□□□□ 0.82
COL1A1-205ENST00000476387 CRKP46108 304 aa20.15■□□□□ 0.82
COL1A1-205ENST00000476387 DZIP1LQ8IYY4 767 aaKnown RBP20.15■□□□□ 0.82
COL1A1-205ENST00000476387 IQSEC3Q9UPP2 1182 aaPredicted RBP20.15■□□□□ 0.82
COL1A1-205ENST00000476387 BCAMP50895 628 aa20.14■□□□□ 0.81
COL1A1-205ENST00000476387 CHAF1AQ13111 956 aaPredicted RBP20.14■□□□□ 0.81
COL1A1-205ENST00000476387 NOM1Q5C9Z4 860 aaKnown RBP20.14■□□□□ 0.81
COL1A1-205ENST00000476387 NBPF12Q5TAG4 269 aaPredicted RBP20.14■□□□□ 0.81
COL1A1-205ENST00000476387 SLC10A4Q96EP9 437 aa20.14■□□□□ 0.81
COL1A1-205ENST00000476387 MRIQ9BWK5 157 aa20.14■□□□□ 0.81
COL1A1-205ENST00000476387 CFHR5Q9BXR6 569 aa20.14■□□□□ 0.81
COL1A1-205ENST00000476387 SUGT1Q9Y2Z0 365 aa20.14■□□□□ 0.81
COL1A1-205ENST00000476387 CIAO1O76071 339 aa20.13■□□□□ 0.81
COL1A1-205ENST00000476387 ZBTB48P10074 688 aaPredicted RBP20.13■□□□□ 0.81
COL1A1-205ENST00000476387 SLC5A1P13866 664 aa20.13■□□□□ 0.81
COL1A1-205ENST00000476387 IREB2P48200 963 aaKnown RBP20.13■□□□□ 0.81
COL1A1-205ENST00000476387 MKRN3Q13064 507 aaKnown RBP20.13■□□□□ 0.81
COL1A1-205ENST00000476387 ATG9AQ7Z3C6 839 aa20.13■□□□□ 0.81
COL1A1-205ENST00000476387 CTU1Q7Z7A3 348 aaKnown RBP20.13■□□□□ 0.81
COL1A1-205ENST00000476387 TMEM57Q8N5G2 664 aa20.13■□□□□ 0.81
COL1A1-205ENST00000476387 LPIN2Q92539 896 aa20.13■□□□□ 0.81
COL1A1-205ENST00000476387 SIL1Q9H173 461 aa20.13■□□□□ 0.81
COL1A1-205ENST00000476387 TDRD3Q9H7E2 651 aaKnown RBP20.13■□□□□ 0.81
COL1A1-205ENST00000476387 FZD1Q9UP38 647 aa20.13■□□□□ 0.81
COL1A1-205ENST00000476387 MAST3O60307 1309 aa20.12■□□□□ 0.81
COL1A1-205ENST00000476387 MANSC4A6NHS7 340 aaPredicted RBP20.12■□□□□ 0.81
COL1A1-205ENST00000476387 GNAI2P04899 355 aa20.12■□□□□ 0.81
COL1A1-205ENST00000476387 INHBEP58166 350 aa20.12■□□□□ 0.81
COL1A1-205ENST00000476387 TEKT1Q969V4 418 aa20.12■□□□□ 0.81
COL1A1-205ENST00000476387 TBC1D8O95759 1140 aa20.11■□□□□ 0.81
COL1A1-205ENST00000476387 ALDH1A1P00352 501 aa20.11■□□□□ 0.81
COL1A1-205ENST00000476387 TNNI2P48788 182 aa20.11■□□□□ 0.81
COL1A1-205ENST00000476387 RGS19P49795 217 aa20.11■□□□□ 0.81
COL1A1-205ENST00000476387 GRIK5Q16478 980 aa20.11■□□□□ 0.81
COL1A1-205ENST00000476387 WNK4Q96J92 1243 aa20.11■□□□□ 0.81
COL1A1-205ENST00000476387 CLMNQ96JQ2 1002 aa20.11■□□□□ 0.81
COL1A1-205ENST00000476387 SRGAP3O43295 1099 aa20.1■□□□□ 0.81
COL1A1-205ENST00000476387 USP2O75604 605 aaPredicted RBP20.1■□□□□ 0.81
COL1A1-205ENST00000476387 ITPRIPQ8IWB1 547 aa20.1■□□□□ 0.81
COL1A1-205ENST00000476387 ANKRD13AQ8IZ07 590 aa20.1■□□□□ 0.81
COL1A1-205ENST00000476387 ZDHHC15Q96MV8 337 aa20.1■□□□□ 0.81
COL1A1-205ENST00000476387 TEPSINQ96N21 525 aa20.1■□□□□ 0.81
COL1A1-205ENST00000476387 MTX1Q13505 466 aa20.09■□□□□ 0.81
COL1A1-205ENST00000476387 PKN2Q16513 984 aaKnown RBP20.09■□□□□ 0.81
COL1A1-205ENST00000476387 WDR66Q8TBY9 1149 aa20.09■□□□□ 0.81
COL1A1-205ENST00000476387 ZNF296Q8WUU4 475 aaPredicted RBP20.09■□□□□ 0.81
COL1A1-205ENST00000476387 COPRSQ9NQ92 184 aa20.09■□□□□ 0.81
COL1A1-205ENST00000476387 CEP126Q9P2H0 1117 aa20.09■□□□□ 0.81
COL1A1-205ENST00000476387 PA2G4Q9UQ80 394 aaKnown RBP20.09■□□□□ 0.81
COL1A1-205ENST00000476387 LAMB1P07942 1786 aa20.08■□□□□ 0.81
COL1A1-205ENST00000476387 TCP10L2B9ZVM9 353 aa20.08■□□□□ 0.81
COL1A1-205ENST00000476387 GPR25O00155 361 aa20.08■□□□□ 0.81
COL1A1-205ENST00000476387 IL15P40933 162 aaPredicted RBP20.08■□□□□ 0.81
COL1A1-205ENST00000476387 ATP2B3Q16720 1220 aa20.08■□□□□ 0.81
COL1A1-205ENST00000476387 FKBP1CQ5VVH2 108 aa20.08■□□□□ 0.81
COL1A1-205ENST00000476387 HHIPL2Q6UWX4 724 aa20.08■□□□□ 0.81
COL1A1-205ENST00000476387 IFNL1Q8IU54 200 aa20.07■□□□□ 0.8
COL1A1-205ENST00000476387 TMEM39BQ9GZU3 492 aa20.07■□□□□ 0.8
COL1A1-205ENST00000476387 TMOD2Q9NZR1 351 aa20.07■□□□□ 0.8
COL1A1-205ENST00000476387 ZBTB22O15209 634 aa20.06■□□□□ 0.8
COL1A1-205ENST00000476387 MS4A1P11836 297 aa20.06■□□□□ 0.8
COL1A1-205ENST00000476387 RLBP1P12271 317 aa20.06■□□□□ 0.8
COL1A1-205ENST00000476387 APOBEC3HQ6NTF7 200 aaKnown RBP20.06■□□□□ 0.8
COL1A1-205ENST00000476387 FAM83AQ86UY5 434 aa20.06■□□□□ 0.8
COL1A1-205ENST00000476387 GNL3LQ9NVN8 582 aaKnown RBP20.06■□□□□ 0.8
COL1A1-205ENST00000476387 SEMA3EO15041 775 aa20.05■□□□□ 0.8
COL1A1-205ENST00000476387 MLLT1Q03111 559 aaPredicted RBP20.05■□□□□ 0.8
COL1A1-205ENST00000476387 CDAN1Q8IWY9 1227 aa20.05■□□□□ 0.8
COL1A1-205ENST00000476387 FKTNO75072 461 aa20.04■□□□□ 0.8
COL1A1-205ENST00000476387 GJA5P36382 358 aa20.04■□□□□ 0.8
COL1A1-205ENST00000476387 OTUD7BQ6GQQ9 843 aa20.04■□□□□ 0.8
COL1A1-205ENST00000476387 HOOK2Q96ED9 719 aa20.04■□□□□ 0.8
COL1A1-205ENST00000476387 RCAN3Q9UKA8 241 aa20.04■□□□□ 0.8
COL1A1-205ENST00000476387 OTOFQ9HC10 1997 aa20.04■□□□□ 0.8
COL1A1-205ENST00000476387 SALL1Q9NSC2 1324 aa20.03■□□□□ 0.8
COL1A1-205ENST00000476387 TESPA1A2RU30 521 aaPredicted RBP20.03■□□□□ 0.8
COL1A1-205ENST00000476387 IGF2BP3O00425 579 aaKnown RBP eCLIP20.03■□□□□ 0.8
COL1A1-205ENST00000476387 CACNB3P54284 484 aa20.03■□□□□ 0.8
COL1A1-205ENST00000476387 MAP3K9P80192 1104 aa20.03■□□□□ 0.8
COL1A1-205ENST00000476387 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.03■□□□□ 0.8
COL1A1-205ENST00000476387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.03■□□□□ 0.8
COL1A1-205ENST00000476387 R3HDMLQ9H3Y0 253 aa20.03■□□□□ 0.8
COL1A1-205ENST00000476387 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.03■□□□□ 0.8
COL1A1-205ENST00000476387 RPAP1Q9BWH6 1393 aaPredicted RBP20.03■□□□□ 0.8
COL1A1-205ENST00000476387 PANK1Q8TE04 598 aa20.02■□□□□ 0.8
COL1A1-205ENST00000476387 OPTNQ96CV9 577 aa20.02■□□□□ 0.8
COL1A1-205ENST00000476387 ELP3Q9H9T3 547 aa20.02■□□□□ 0.8
COL1A1-205ENST00000476387 DENND2AQ9ULE3 1009 aa20.02■□□□□ 0.8
COL1A1-205ENST00000476387 CSADQ9Y600 493 aa20.02■□□□□ 0.8
COL1A1-205ENST00000476387 PNMA6EA0A0J9YXQ4 647 aa20.01■□□□□ 0.79
COL1A1-205ENST00000476387 VGLL4Q14135 290 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms