RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 HDAC1Q13547 482 aaPredicted RBP18.55■□□□□ 0.56
SNX13-207ENST00000475800 SAPCD2Q86UD0 394 aa18.55■□□□□ 0.56
SNX13-207ENST00000475800 AACSQ86V21 672 aa18.55■□□□□ 0.56
SNX13-207ENST00000475800 ZC3H15Q8WU90 426 aaKnown RBP18.55■□□□□ 0.56
SNX13-207ENST00000475800 EAF2Q96CJ1 260 aaPredicted RBP18.55■□□□□ 0.56
SNX13-207ENST00000475800 MXD3Q9BW11 206 aa18.55■□□□□ 0.56
SNX13-207ENST00000475800 LRRCC1Q9C099 1032 aa18.55■□□□□ 0.56
SNX13-207ENST00000475800 ADM5C9JUS6 153 aa18.54■□□□□ 0.56
SNX13-207ENST00000475800 APBB1O00213 710 aa18.54■□□□□ 0.56
SNX13-207ENST00000475800 ARID4AP29374 1257 aaPredicted RBP18.54■□□□□ 0.56
SNX13-207ENST00000475800 KIF4BQ2VIQ3 1234 aa18.54■□□□□ 0.56
SNX13-207ENST00000475800 KRT26Q7Z3Y9 468 aa18.54■□□□□ 0.56
SNX13-207ENST00000475800 KIAA0825Q8IV33 1275 aa18.54■□□□□ 0.56
SNX13-207ENST00000475800 ZGPATQ8N5A5 531 aaKnown RBP18.54■□□□□ 0.56
SNX13-207ENST00000475800 CERS5Q8N5B7 392 aa18.54■□□□□ 0.56
SNX13-207ENST00000475800 ZNF512BQ96KM6 892 aaPredicted RBP18.54■□□□□ 0.56
SNX13-207ENST00000475800 DBNDD2Q9BQY9 259 aa18.54■□□□□ 0.56
SNX13-207ENST00000475800 IL1RAPL2Q9NP60 686 aa18.54■□□□□ 0.56
SNX13-207ENST00000475800 PGAP2Q9UHJ9 254 aa18.54■□□□□ 0.56
SNX13-207ENST00000475800 JAG2Q9Y219 1238 aa18.54■□□□□ 0.56
SNX13-207ENST00000475800 MAST3O60307 1309 aa18.53■□□□□ 0.56
SNX13-207ENST00000475800 SALL1Q9NSC2 1324 aa18.53■□□□□ 0.56
SNX13-207ENST00000475800 TTC39AQ5SRH9 613 aa18.53■□□□□ 0.56
SNX13-207ENST00000475800 RWDD1Q9H446 243 aaPredicted RBP18.53■□□□□ 0.56
SNX13-207ENST00000475800 MYOZ2Q9NPC6 264 aa18.53■□□□□ 0.56
SNX13-207ENST00000475800 DBNLQ9UJU6 430 aaKnown RBP18.53■□□□□ 0.56
SNX13-207ENST00000475800 AKAP11Q9UKA4 1901 aa18.53■□□□□ 0.56
SNX13-207ENST00000475800 ASTN2O75129 1339 aaPredicted RBP18.52■□□□□ 0.56
SNX13-207ENST00000475800 ECM29Q5VYK3 1845 aa18.52■□□□□ 0.56
SNX13-207ENST00000475800 IFIT2P09913 472 aaKnown RBP18.52■□□□□ 0.56
SNX13-207ENST00000475800 HUNKP57058 714 aa18.52■□□□□ 0.56
SNX13-207ENST00000475800 RASGRF1Q13972 1273 aa18.52■□□□□ 0.56
SNX13-207ENST00000475800 GCC1Q96CN9 775 aa18.52■□□□□ 0.56
SNX13-207ENST00000475800 ZIC5Q96T25 663 aa18.52■□□□□ 0.56
SNX13-207ENST00000475800 CCDC8Q9H0W5 538 aaPredicted RBP18.52■□□□□ 0.56
SNX13-207ENST00000475800 COL1A1P02452 1464 aaPredicted RBP18.52■□□□□ 0.55
SNX13-207ENST00000475800 HDLBPQ00341 1268 aaKnown RBP18.51■□□□□ 0.55
SNX13-207ENST00000475800 DCPSQ96C86 337 aaKnown RBP18.51■□□□□ 0.55
SNX13-207ENST00000475800 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
SNX13-207ENST00000475800 TTF2Q9UNY4 1162 aaKnown RBP18.51■□□□□ 0.55
SNX13-207ENST00000475800 SPTY2D1Q68D10 685 aaPredicted RBP18.5■□□□□ 0.55
SNX13-207ENST00000475800 SPATA5Q8NB90 893 aa18.5■□□□□ 0.55
SNX13-207ENST00000475800 MTMR14Q8NCE2 650 aa18.5■□□□□ 0.55
SNX13-207ENST00000475800 MRIQ9BWK5 157 aa18.5■□□□□ 0.55
SNX13-207ENST00000475800 SERPINA10Q9UK55 444 aa18.5■□□□□ 0.55
SNX13-207ENST00000475800 SCAF8Q9UPN6 1271 aaKnown RBP18.5■□□□□ 0.55
SNX13-207ENST00000475800 F8W031 263 aaPredicted RBP18.49■□□□□ 0.55
SNX13-207ENST00000475800 IGSF3O75054 1194 aa18.49■□□□□ 0.55
SNX13-207ENST00000475800 LDHBP07195 334 aaKnown RBP18.49■□□□□ 0.55
SNX13-207ENST00000475800 MAP2K2P36507 400 aa18.49■□□□□ 0.55
SNX13-207ENST00000475800 IRX6P78412 446 aaPredicted RBP18.49■□□□□ 0.55
SNX13-207ENST00000475800 DLGAP5Q15398 846 aa18.49■□□□□ 0.55
SNX13-207ENST00000475800 POTEDQ86YR6 584 aa18.49■□□□□ 0.55
SNX13-207ENST00000475800 ABHD8Q96I13 439 aa18.49■□□□□ 0.55
SNX13-207ENST00000475800 TLR7Q9NYK1 1049 aaKnown RBP18.49■□□□□ 0.55
SNX13-207ENST00000475800 GGA3Q9NZ52 723 aa18.49■□□□□ 0.55
SNX13-207ENST00000475800 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
SNX13-207ENST00000475800 THSD7BQ9C0I4 1608 aa18.49■□□□□ 0.55
SNX13-207ENST00000475800 MCAMP43121 646 aa18.48■□□□□ 0.55
SNX13-207ENST00000475800 CASP8AP2Q9UKL3 1982 aa18.48■□□□□ 0.55
SNX13-207ENST00000475800 PITPNM2Q9BZ72 1349 aa18.48■□□□□ 0.55
SNX13-207ENST00000475800 MYH2Q9UKX2 1941 aa18.47■□□□□ 0.55
SNX13-207ENST00000475800 CCDC85CA6NKD9 419 aa18.47■□□□□ 0.55
SNX13-207ENST00000475800 WNT10BO00744 389 aa18.47■□□□□ 0.55
SNX13-207ENST00000475800 MYO1BO43795 1136 aa18.47■□□□□ 0.55
SNX13-207ENST00000475800 SCARF1Q14162 830 aa18.47■□□□□ 0.55
SNX13-207ENST00000475800 CFAP100Q494V2 611 aa18.47■□□□□ 0.55
SNX13-207ENST00000475800 SULF1Q8IWU6 871 aa18.47■□□□□ 0.55
SNX13-207ENST00000475800 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNX13-207ENST00000475800 TEKT1Q969V4 418 aa18.47■□□□□ 0.55
SNX13-207ENST00000475800 GBA2Q9HCG7 927 aaPredicted RBP18.47■□□□□ 0.55
SNX13-207ENST00000475800 RBM5P52756 815 aaKnown RBP eCLIP18.46■□□□□ 0.55
SNX13-207ENST00000475800 HHIPL2Q6UWX4 724 aa18.46■□□□□ 0.55
SNX13-207ENST00000475800 ERICH6Q7L0X2 663 aa18.46■□□□□ 0.55
SNX13-207ENST00000475800 SLF2Q8IX21 1173 aa18.46■□□□□ 0.55
SNX13-207ENST00000475800 C2orf69Q8N8R5 385 aa18.46■□□□□ 0.55
SNX13-207ENST00000475800 GPATCH3Q96I76 525 aa18.46■□□□□ 0.55
SNX13-207ENST00000475800 ZBED3Q96IU2 234 aaPredicted RBP18.46■□□□□ 0.55
SNX13-207ENST00000475800 ABCF2Q9UG63 623 aa18.46■□□□□ 0.55
SNX13-207ENST00000475800 SPDYE2BA6NHP3 402 aa18.45■□□□□ 0.54
SNX13-207ENST00000475800 SMARCA5O60264 1052 aaPredicted RBP18.45■□□□□ 0.54
SNX13-207ENST00000475800 SPDYE6P0CI01 402 aa18.45■□□□□ 0.54
SNX13-207ENST00000475800 PRDX5P30044 214 aa18.45■□□□□ 0.54
SNX13-207ENST00000475800 CRKP46108 304 aa18.45■□□□□ 0.54
SNX13-207ENST00000475800 ANGEL2Q5VTE6 544 aaKnown RBP18.45■□□□□ 0.54
SNX13-207ENST00000475800 NEFLP07196 543 aa18.44■□□□□ 0.54
SNX13-207ENST00000475800 ZNF157P51786 506 aaPredicted RBP18.44■□□□□ 0.54
SNX13-207ENST00000475800 GRIK5Q16478 980 aa18.44■□□□□ 0.54
SNX13-207ENST00000475800 NBPF9Q3BBW0 867 aa18.44■□□□□ 0.54
SNX13-207ENST00000475800 DZIP1Q86YF9 867 aaKnown RBP18.44■□□□□ 0.54
SNX13-207ENST00000475800 SMC5Q8IY18 1101 aa18.44■□□□□ 0.54
SNX13-207ENST00000475800 HHIPL1Q96JK4 782 aa18.44■□□□□ 0.54
SNX13-207ENST00000475800 ZDHHC15Q96MV8 337 aa18.44■□□□□ 0.54
SNX13-207ENST00000475800 BCL11AQ9H165 835 aa18.44■□□□□ 0.54
SNX13-207ENST00000475800 MAST2Q6P0Q8 1798 aa18.43■□□□□ 0.54
SNX13-207ENST00000475800 GSTO1P78417 241 aa18.43■□□□□ 0.54
SNX13-207ENST00000475800 NOGQ13253 232 aa18.43■□□□□ 0.54
SNX13-207ENST00000475800 TTF1Q15361 905 aaPredicted RBP18.43■□□□□ 0.54
SNX13-207ENST00000475800 ANKRD45Q5TZF3 282 aa18.43■□□□□ 0.54
SNX13-207ENST00000475800 RGMBQ6NW40 437 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms