RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 MAST3O60307 1309 aa14.26□□□□□ -0.13
CPNE1-222ENST00000473373 NOGQ13253 232 aa14.26□□□□□ -0.13
CPNE1-222ENST00000473373 RGMBQ6NW40 437 aa14.26□□□□□ -0.13
CPNE1-222ENST00000473373 ATG9AQ7Z3C6 839 aa14.26□□□□□ -0.13
CPNE1-222ENST00000473373 C1orf115Q9H7X2 142 aa14.26□□□□□ -0.13
CPNE1-222ENST00000473373 COPRSQ9NQ92 184 aa14.26□□□□□ -0.13
CPNE1-222ENST00000473373 TMOD2Q9NZR1 351 aa14.26□□□□□ -0.13
CPNE1-222ENST00000473373 FGFR2P21802 821 aa14.25□□□□□ -0.13
CPNE1-222ENST00000473373 TNFAIP1Q13829 316 aa14.25□□□□□ -0.13
CPNE1-222ENST00000473373 ARMC9Q7Z3E5 817 aa14.25□□□□□ -0.13
CPNE1-222ENST00000473373 WDR66Q8TBY9 1149 aa14.25□□□□□ -0.13
CPNE1-222ENST00000473373 CASP8AP2Q9UKL3 1982 aa14.25□□□□□ -0.13
CPNE1-222ENST00000473373 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 CRKP46108 304 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 TNNI2P48788 182 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 TFCP2Q12800 502 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-222ENST00000473373 PANK1Q8TE04 598 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 TEKT1Q969V4 418 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 CCDC102AQ96A19 550 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 RNF216Q9NWF9 866 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-222ENST00000473373 SERPINA10Q9UK55 444 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 RCAN3Q9UKA8 241 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 PCDHAC2Q9Y5I4 1007 aa14.24□□□□□ -0.13
CPNE1-222ENST00000473373 COL1A1P02452 1464 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-222ENST00000473373 PNMA6EA0A0J9YXQ4 647 aa14.23□□□□□ -0.13
CPNE1-222ENST00000473373 FKBP1BP68106 108 aa14.23□□□□□ -0.13
CPNE1-222ENST00000473373 KIF23Q02241 960 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-222ENST00000473373 MTX1Q13505 466 aa14.23□□□□□ -0.13
CPNE1-222ENST00000473373 MTMR14Q8NCE2 650 aa14.23□□□□□ -0.13
CPNE1-222ENST00000473373 PRMT6Q96LA8 375 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-222ENST00000473373 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
CPNE1-222ENST00000473373 DEFB129Q9H1M3 183 aa14.23□□□□□ -0.13
CPNE1-222ENST00000473373 TDRD3Q9H7E2 651 aaKnown RBP14.23□□□□□ -0.13
CPNE1-222ENST00000473373 DENND2AQ9ULE3 1009 aa14.23□□□□□ -0.13
CPNE1-222ENST00000473373 A0A1B0GUL7 405 aa14.22□□□□□ -0.13
CPNE1-222ENST00000473373 FAM155AB1AL88 458 aaPredicted RBP14.22□□□□□ -0.13
CPNE1-222ENST00000473373 TCP10L2B9ZVM9 353 aa14.22□□□□□ -0.13
CPNE1-222ENST00000473373 UBE2Q2LH0YL09 131 aa14.22□□□□□ -0.13
CPNE1-222ENST00000473373 PPP1R12BO60237 982 aaPredicted RBP14.22□□□□□ -0.13
CPNE1-222ENST00000473373 SURF6O75683 361 aaKnown RBP14.22□□□□□ -0.13
CPNE1-222ENST00000473373 RLBP1P12271 317 aa14.22□□□□□ -0.13
CPNE1-222ENST00000473373 PHKA1P46020 1223 aa14.22□□□□□ -0.13
CPNE1-222ENST00000473373 TIMM10P62072 90 aa14.22□□□□□ -0.13
CPNE1-222ENST00000473373 MVPQ14764 893 aaKnown RBP14.22□□□□□ -0.13
CPNE1-222ENST00000473373 BCL11AQ9H165 835 aa14.22□□□□□ -0.13
CPNE1-222ENST00000473373 ANGEL1Q9UNK9 670 aaKnown RBP14.22□□□□□ -0.13
CPNE1-222ENST00000473373 PPP2R3BQ9Y5P8 575 aa14.22□□□□□ -0.13
CPNE1-222ENST00000473373 TRPA1O75762 1119 aa14.21□□□□□ -0.13
CPNE1-222ENST00000473373 LDHBP07195 334 aaKnown RBP14.21□□□□□ -0.13
CPNE1-222ENST00000473373 ADORA1P30542 326 aa14.21□□□□□ -0.13
CPNE1-222ENST00000473373 SUPT20HL1Q3ZLR7 823 aa14.21□□□□□ -0.13
CPNE1-222ENST00000473373 CCDC102BQ68D86 513 aa14.21□□□□□ -0.13
CPNE1-222ENST00000473373 MOB2Q70IA6 237 aa14.21□□□□□ -0.13
CPNE1-222ENST00000473373 ZGPATQ8N5A5 531 aaKnown RBP14.21□□□□□ -0.13
CPNE1-222ENST00000473373 CHMP4BQ9H444 224 aaKnown RBP14.21□□□□□ -0.13
CPNE1-222ENST00000473373 RNF186Q9NXI6 227 aa14.21□□□□□ -0.13
CPNE1-222ENST00000473373 ZNF70Q9UC06 446 aaPredicted RBP14.21□□□□□ -0.13
CPNE1-222ENST00000473373 ABCF2Q9UG63 623 aa14.21□□□□□ -0.13
CPNE1-222ENST00000473373 SUGT1Q9Y2Z0 365 aa14.21□□□□□ -0.13
CPNE1-222ENST00000473373 SEMA3EO15041 775 aa14.2□□□□□ -0.14
CPNE1-222ENST00000473373 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
CPNE1-222ENST00000473373 SOX10P56693 466 aa14.2□□□□□ -0.14
CPNE1-222ENST00000473373 ATP8B2P98198 1209 aa14.2□□□□□ -0.14
CPNE1-222ENST00000473373 DZIP1Q86YF9 867 aaKnown RBP14.2□□□□□ -0.14
CPNE1-222ENST00000473373 XAGE2Q96GT9 111 aa14.2□□□□□ -0.14
CPNE1-222ENST00000473373 ZBED3Q96IU2 234 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-222ENST00000473373 COG6Q9Y2V7 657 aa14.2□□□□□ -0.14
CPNE1-222ENST00000473373 HDLBPQ00341 1268 aaKnown RBP14.19□□□□□ -0.14
CPNE1-222ENST00000473373 MKRN3Q13064 507 aaKnown RBP14.19□□□□□ -0.14
CPNE1-222ENST00000473373 RASA3Q14644 834 aa14.19□□□□□ -0.14
CPNE1-222ENST00000473373 GRIK5Q16478 980 aa14.19□□□□□ -0.14
CPNE1-222ENST00000473373 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
CPNE1-222ENST00000473373 TTC39AQ5SRH9 613 aa14.19□□□□□ -0.14
CPNE1-222ENST00000473373 DDX19BQ9UMR2 479 aa14.19□□□□□ -0.14
CPNE1-222ENST00000473373 ZBTB7BO15156 539 aaPredicted RBP14.18□□□□□ -0.14
CPNE1-222ENST00000473373 SLC10A3P09131 477 aa14.18□□□□□ -0.14
CPNE1-222ENST00000473373 HOXD11P31277 338 aaPredicted RBP14.18□□□□□ -0.14
CPNE1-222ENST00000473373 IREB2P48200 963 aaKnown RBP14.18□□□□□ -0.14
CPNE1-222ENST00000473373 CCDC158Q5M9N0 1113 aa14.18□□□□□ -0.14
CPNE1-222ENST00000473373 SPTY2D1Q68D10 685 aaPredicted RBP14.18□□□□□ -0.14
CPNE1-222ENST00000473373 RASAL3Q86YV0 1011 aa14.18□□□□□ -0.14
CPNE1-222ENST00000473373 SLF2Q8IX21 1173 aa14.18□□□□□ -0.14
CPNE1-222ENST00000473373 CSRNP1Q96S65 589 aa14.18□□□□□ -0.14
CPNE1-222ENST00000473373 SAGE1Q9NXZ1 904 aa14.18□□□□□ -0.14
CPNE1-222ENST00000473373 OTOFQ9HC10 1997 aa14.18□□□□□ -0.14
CPNE1-222ENST00000473373 MYO5AQ9Y4I1 1855 aaKnown RBP14.17□□□□□ -0.14
CPNE1-222ENST00000473373 HMMRO75330 724 aa14.17□□□□□ -0.14
CPNE1-222ENST00000473373 PRDX5P30044 214 aa14.17□□□□□ -0.14
CPNE1-222ENST00000473373 CACNB3P54284 484 aa14.17□□□□□ -0.14
CPNE1-222ENST00000473373 NBPF12Q5TAG4 269 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-222ENST00000473373 SLC10A4Q96EP9 437 aa14.17□□□□□ -0.14
CPNE1-222ENST00000473373 FZD1Q9UP38 647 aa14.17□□□□□ -0.14
CPNE1-222ENST00000473373 TNRC18O15417 2968 aaPredicted RBP14.17□□□□□ -0.14
CPNE1-222ENST00000473373 DOCK2Q92608 1830 aa14.16□□□□□ -0.14
CPNE1-222ENST00000473373 APBB1O00213 710 aa14.16□□□□□ -0.14
CPNE1-222ENST00000473373 UQCRFS1P1P0C7P4 283 aa14.16□□□□□ -0.14
CPNE1-222ENST00000473373 RASGRF1Q13972 1273 aa14.16□□□□□ -0.14
CPNE1-222ENST00000473373 POLA2Q14181 598 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms