RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	TMX3	Q96JJ7	454 aa		12.82	□□□□□ -0.36
MRPS18B-208	ENST00000472267	TTC14	Q96N46	770 aa		12.82	□□□□□ -0.36
MRPS18B-208	ENST00000472267	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.82	□□□□□ -0.36
MRPS18B-208	ENST00000472267	CCDC88A	Q3V6T2	1871 aa		12.82	□□□□□ -0.36
MRPS18B-208	ENST00000472267	MAGEB6P1	A0A0J9YX57	407 aa		12.81	□□□□□ -0.36
MRPS18B-208	ENST00000472267	PRDX5	P30044	214 aa		12.81	□□□□□ -0.36
MRPS18B-208	ENST00000472267	MECOM	Q03112	1051 aa		12.81	□□□□□ -0.36
MRPS18B-208	ENST00000472267	COL9A3	Q14050	684 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPS18B-208	ENST00000472267	IMMT	Q16891	758 aa	Known RBP	12.81	□□□□□ -0.36
MRPS18B-208	ENST00000472267	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPS18B-208	ENST00000472267	ADGRA1	Q86SQ6	560 aa		12.81	□□□□□ -0.36
MRPS18B-208	ENST00000472267	TCEANC2	Q96MN5	208 aa		12.81	□□□□□ -0.36
MRPS18B-208	ENST00000472267	NEK1	Q96PY6	1258 aa		12.81	□□□□□ -0.36
MRPS18B-208	ENST00000472267	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.81	□□□□□ -0.36
MRPS18B-208	ENST00000472267	PATL2	C9JE40	543 aa	Known RBP	12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267		G3V3G9	751 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	PRKAB2	O43741	272 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	LDHB	P07195	334 aa	Known RBP	12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	IL1R1	P14778	569 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	RPS6KB1	P23443	525 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	R3HDM1	Q15032	1099 aa	Known RBP	12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	LAMA4	Q16363	1823 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	DCAF8	Q5TAQ9	597 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	STOX1	Q6ZVD7	989 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	C10orf71	Q711Q0	1435 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	DZIP1	Q86YF9	867 aa	Known RBP	12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	ZGPAT	Q8N5A5	531 aa	Known RBP	12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	IL27	Q8NEV9	243 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	FBXW7	Q969H0	707 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	NSUN4	Q96CB9	384 aa	Known RBP	12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	SLC4A4	Q9Y6R1	1079 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	DUOX1	Q9NRD9	1551 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267		E7EWF7	191 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	ZNF213	O14771	459 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	DYNLL1	P63167	89 aa	Known RBP	12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	ZNF384	Q8TF68	577 aa		12.8	□□□□□ -0.36
MRPS18B-208	ENST00000472267	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.8	□□□□□ -0.36	1e-7	■■■■□ 21.6
MRPS18B-208	ENST00000472267	MAST2	Q6P0Q8	1798 aa		12.79	□□□□□ -0.36
MRPS18B-208	ENST00000472267	SALL1	Q9NSC2	1324 aa		12.79	□□□□□ -0.36
MRPS18B-208	ENST00000472267	ZBTB22	O15209	634 aa		12.79	□□□□□ -0.36
MRPS18B-208	ENST00000472267	GNAT2	P19087	354 aa		12.79	□□□□□ -0.36
MRPS18B-208	ENST00000472267	DOK7	Q18PE1	504 aa		12.79	□□□□□ -0.36
MRPS18B-208	ENST00000472267	IFNL3	Q8IZI9	196 aa		12.79	□□□□□ -0.36
MRPS18B-208	ENST00000472267	EYA3	Q99504	573 aa		12.79	□□□□□ -0.36
MRPS18B-208	ENST00000472267	NAPB	Q9H115	298 aa		12.79	□□□□□ -0.36
MRPS18B-208	ENST00000472267	CHMP5	Q9NZZ3	219 aa		12.79	□□□□□ -0.36
MRPS18B-208	ENST00000472267	LIMCH1	Q9UPQ0	1083 aa		12.79	□□□□□ -0.36
MRPS18B-208	ENST00000472267	GSG1L2	A8MUP6	293 aa		12.78	□□□□□ -0.36
MRPS18B-208	ENST00000472267	POLD1	P28340	1107 aa		12.78	□□□□□ -0.36
MRPS18B-208	ENST00000472267	TDO2	P48775	406 aa		12.78	□□□□□ -0.36
MRPS18B-208	ENST00000472267	GRIK5	Q16478	980 aa		12.78	□□□□□ -0.36
MRPS18B-208	ENST00000472267	NACAP1	Q9BZK3	213 aa		12.78	□□□□□ -0.36
MRPS18B-208	ENST00000472267	COA1	Q9GZY4	146 aa		12.78	□□□□□ -0.36
MRPS18B-208	ENST00000472267	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	12.78	□□□□□ -0.36
MRPS18B-208	ENST00000472267	CHD4	Q14839	1912 aa		12.78	□□□□□ -0.36
MRPS18B-208	ENST00000472267	C21orf2	O43822	256 aa		12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	HMGB1	P09429	215 aa	Known RBP	12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	DPEP1	P16444	411 aa		12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	GTF2I	P78347	998 aa		12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	FGD1	P98174	961 aa		12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	ALX1	Q15699	326 aa		12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	SDR42E1	Q8WUS8	393 aa		12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	RIOK1	Q9BRS2	568 aa	Known RBP	12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	LRRC2	Q9BYS8	371 aa		12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	MTFR1L	Q9H019	292 aa		12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.77	□□□□□ -0.36
MRPS18B-208	ENST00000472267	PSD	A5PKW4	1024 aa	Predicted RBP	12.77	□□□□□ -0.37
MRPS18B-208	ENST00000472267	GSTO1	P78417	241 aa		12.77	□□□□□ -0.37
MRPS18B-208	ENST00000472267	CUL4A	Q13619	759 aa		12.77	□□□□□ -0.37
MRPS18B-208	ENST00000472267	ANKRD1	Q15327	319 aa		12.77	□□□□□ -0.37
MRPS18B-208	ENST00000472267	MFSD14B	Q5SR56	506 aa		12.77	□□□□□ -0.37
MRPS18B-208	ENST00000472267		Q6ZUG5	572 aa		12.77	□□□□□ -0.37
MRPS18B-208	ENST00000472267	DHX32	Q7L7V1	743 aa	Known RBP	12.77	□□□□□ -0.37
MRPS18B-208	ENST00000472267	TTLL6	Q8N841	843 aa		12.77	□□□□□ -0.37
MRPS18B-208	ENST00000472267	DLEC1	Q9Y238	1755 aa		12.77	□□□□□ -0.37
MRPS18B-208	ENST00000472267	MYH2	Q9UKX2	1941 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	LARGE1	O95461	756 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	DDIT3	P35638	169 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	CTDSPL2	Q05D32	466 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	TOB2	Q14106	344 aa	Predicted RBP	12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	NBR1	Q14596	966 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	DIXDC1	Q155Q3	683 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	CHST3	Q7LGC8	479 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	RALYL	Q86SE5	291 aa	Known RBP	12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	TBC1D10C	Q8IV04	446 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	KLHL34	Q8N239	644 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	TBC1D22A	Q8WUA7	517 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	C7orf43	Q8WVR3	580 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	ZSCAN31	Q96LW9	406 aa	Predicted RBP	12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	DBNDD1	Q9H9R9	158 aa		12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.76	□□□□□ -0.37
MRPS18B-208	ENST00000472267	ZMYM6	O95789	1325 aa		12.75	□□□□□ -0.37
MRPS18B-208	ENST00000472267	FAM205A	Q6ZU69	1335 aa		12.75	□□□□□ -0.37
MRPS18B-208	ENST00000472267	STK11IP	Q8N1F8	1099 aa		12.75	□□□□□ -0.37
MRPS18B-208	ENST00000472267	NCOA7	Q8NI08	942 aa		12.75	□□□□□ -0.37
MRPS18B-208	ENST00000472267	NOL10	Q9BSC4	688 aa	Known RBP	12.75	□□□□□ -0.37
MRPS18B-208	ENST00000472267	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.75	□□□□□ -0.37
MRPS18B-208	ENST00000472267	NBPF3	Q9H094	633 aa		12.75	□□□□□ -0.37
MRPS18B-208	ENST00000472267	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12.75	□□□□□ -0.37
MRPS18B-208	ENST00000472267	TPCN1	Q9ULQ1	816 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms