RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 NPHS2Q9NP85 383 aa9.25□□□□□ -0.93
CD46-213ENST00000471987 CYP11A1P05108 521 aa9.24□□□□□ -0.93
CD46-213ENST00000471987 GRIK1P39086 918 aa9.24□□□□□ -0.93
CD46-213ENST00000471987 HP1BP3Q5SSJ5 553 aaPredicted RBP9.24□□□□□ -0.93
CD46-213ENST00000471987 INTS5Q6P9B9 1019 aaKnown RBP9.24□□□□□ -0.93
CD46-213ENST00000471987 ZFYVE1Q9HBF4 777 aa9.24□□□□□ -0.93
CD46-213ENST00000471987 GPR182O15218 404 aa9.23□□□□□ -0.93
CD46-213ENST00000471987 IGHA2P01877 340 aa9.23□□□□□ -0.93
CD46-213ENST00000471987 RXRBP28702 533 aa9.23□□□□□ -0.93
CD46-213ENST00000471987 SGO2Q562F6 1265 aa9.23□□□□□ -0.93
CD46-213ENST00000471987 DMRTB1Q96MA1 342 aa9.23□□□□□ -0.93
CD46-213ENST00000471987 NIF3L1Q9GZT8 377 aa9.23□□□□□ -0.93
CD46-213ENST00000471987 KIAA1324LA8MWY0 1029 aaPredicted RBP9.22□□□□□ -0.93
CD46-213ENST00000471987 EIF1AYO14602 144 aaKnown RBP9.22□□□□□ -0.93
CD46-213ENST00000471987 B3GALT4O96024 378 aa9.22□□□□□ -0.93
CD46-213ENST00000471987 ITPKAP23677 461 aa9.22□□□□□ -0.93
CD46-213ENST00000471987 MAOBP27338 520 aa9.22□□□□□ -0.93
CD46-213ENST00000471987 USP11P51784 963 aa9.22□□□□□ -0.93
CD46-213ENST00000471987 POU4F3Q15319 338 aa9.22□□□□□ -0.93
CD46-213ENST00000471987 SHKBP1Q8TBC3 707 aa9.22□□□□□ -0.93
CD46-213ENST00000471987 CCDC74AQ96AQ1 378 aa9.22□□□□□ -0.93
CD46-213ENST00000471987 RBCK1Q9BYM8 510 aa9.22□□□□□ -0.93
CD46-213ENST00000471987 ZNF576Q9H609 170 aa9.22□□□□□ -0.93
CD46-213ENST00000471987 SOWAHDA6NJG2 315 aa9.21□□□□□ -0.94
CD46-213ENST00000471987 DRD2P14416 443 aa9.21□□□□□ -0.94
CD46-213ENST00000471987 PTPN12Q05209 780 aaKnown RBP9.21□□□□□ -0.94
CD46-213ENST00000471987 SOX4Q06945 474 aaPredicted RBP9.21□□□□□ -0.94
CD46-213ENST00000471987 GIMAP7Q8NHV1 300 aa9.21□□□□□ -0.94
CD46-213ENST00000471987 ALKBH8Q96BT7 664 aaKnown RBP9.21□□□□□ -0.94
CD46-213ENST00000471987 PRR19A6NJB7 356 aa9.2□□□□□ -0.94
CD46-213ENST00000471987 MED26O95402 600 aa9.2□□□□□ -0.94
CD46-213ENST00000471987 PRPF40BQ6NWY9 871 aaKnown RBP9.2□□□□□ -0.94
CD46-213ENST00000471987 C2CD4AQ8NCU7 369 aaPredicted RBP9.2□□□□□ -0.94
CD46-213ENST00000471987 CSRNP1Q96S65 589 aa9.2□□□□□ -0.94
CD46-213ENST00000471987 CORO1BQ9BR76 489 aa9.2□□□□□ -0.94
CD46-213ENST00000471987 YIPF2Q9BWQ6 316 aa9.2□□□□□ -0.94
CD46-213ENST00000471987 TIMELESSQ9UNS1 1208 aa9.2□□□□□ -0.94
CD46-213ENST00000471987 TRAK1Q9UPV9 953 aa9.2□□□□□ -0.94
CD46-213ENST00000471987 GNEQ9Y223 722 aaKnown RBP9.2□□□□□ -0.94
CD46-213ENST00000471987 FAM95CA0A1B0GW59 222 aa9.19□□□□□ -0.94
CD46-213ENST00000471987 WDR64B1ANS9 1081 aa9.19□□□□□ -0.94
CD46-213ENST00000471987 GADD45BO75293 160 aaPredicted RBP9.19□□□□□ -0.94
CD46-213ENST00000471987 PAOXQ6QHF9 649 aa9.19□□□□□ -0.94
CD46-213ENST00000471987 MFSD14AQ96MC6 490 aa9.19□□□□□ -0.94
CD46-213ENST00000471987 ABCB6Q9NP58 842 aa9.19□□□□□ -0.94
CD46-213ENST00000471987 BRD1O95696 1058 aa9.18□□□□□ -0.94
CD46-213ENST00000471987 ADH5P11766 374 aa9.18□□□□□ -0.94
CD46-213ENST00000471987 TRIM56Q9BRZ2 755 aaKnown RBP9.18□□□□□ -0.94
CD46-213ENST00000471987 BIN2Q9UBW5 565 aaPredicted RBP9.18□□□□□ -0.94
CD46-213ENST00000471987 NFKBIBQ15653 356 aa9.17□□□□□ -0.94
CD46-213ENST00000471987 RPS26P11Q5JNZ5 115 aaPredicted RBP9.17□□□□□ -0.94
CD46-213ENST00000471987 CDPF1Q6NVV7 123 aa9.17□□□□□ -0.94
CD46-213ENST00000471987 FBLIM1Q8WUP2 373 aa9.17□□□□□ -0.94
CD46-213ENST00000471987 RAD18Q9NS91 495 aa9.17□□□□□ -0.94
CD46-213ENST00000471987 ATG3Q9NT62 314 aa9.17□□□□□ -0.94
CD46-213ENST00000471987 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
CD46-213ENST00000471987 CTSBP07858 339 aa9.16□□□□□ -0.94
CD46-213ENST00000471987 SPINK2P20155 84 aa9.16□□□□□ -0.94
CD46-213ENST00000471987 AP3B2Q13367 1082 aa9.16□□□□□ -0.94
CD46-213ENST00000471987 CPSF6Q16630 551 aaKnown RBP eCLIP9.16□□□□□ -0.94
CD46-213ENST00000471987 FBXL6Q8N531 539 aa9.16□□□□□ -0.94
CD46-213ENST00000471987 PIM2Q9P1W9 311 aa9.16□□□□□ -0.94
CD46-213ENST00000471987 DCTN4Q9UJW0 460 aa9.16□□□□□ -0.94
CD46-213ENST00000471987 GRM2Q14416 872 aa9.15□□□□□ -0.94
CD46-213ENST00000471987 AKAP4Q5JQC9 854 aa9.15□□□□□ -0.94
CD46-213ENST00000471987 TMC7Q7Z402 723 aa9.15□□□□□ -0.94
CD46-213ENST00000471987 DTX1Q86Y01 620 aa9.15□□□□□ -0.94
CD46-213ENST00000471987 EZH1Q92800 747 aaPredicted RBP9.15□□□□□ -0.94
CD46-213ENST00000471987 ACTL7BQ9Y614 415 aa9.15□□□□□ -0.94
CD46-213ENST00000471987 BTBD11A6QL63 1104 aa9.14□□□□□ -0.95
CD46-213ENST00000471987 F13BP05160 661 aa9.14□□□□□ -0.95
CD46-213ENST00000471987 EPS8L3Q8TE67 593 aaKnown RBP9.14□□□□□ -0.95
CD46-213ENST00000471987 OSBPL1AQ9BXW6 950 aa9.14□□□□□ -0.95
CD46-213ENST00000471987 NLRP2Q9NX02 1062 aa9.14□□□□□ -0.95
CD46-213ENST00000471987 PPP4R2Q9NY27 417 aa9.14□□□□□ -0.95
CD46-213ENST00000471987 LEMD3Q9Y2U8 911 aa9.14□□□□□ -0.95
CD46-213ENST00000471987 ECEL1O95672 775 aa9.13□□□□□ -0.95
CD46-213ENST00000471987 PDE3AQ14432 1141 aa9.13□□□□□ -0.95
CD46-213ENST00000471987 DYMQ7RTS9 669 aa9.13□□□□□ -0.95
CD46-213ENST00000471987 GLIS3Q8NEA6 775 aa9.13□□□□□ -0.95
CD46-213ENST00000471987 METTL22Q9BUU2 404 aaPredicted RBP9.13□□□□□ -0.95
CD46-213ENST00000471987 SYNGAP1Q96PV0 1343 aa9.12□□□□□ -0.95
CD46-213ENST00000471987 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.12□□□□□ -0.95
CD46-213ENST00000471987 MAP7Q14244 749 aa9.12□□□□□ -0.95
CD46-213ENST00000471987 DTHD1Q6ZMT9 781 aa9.12□□□□□ -0.95
CD46-213ENST00000471987 TBC1D32Q96NH3 1257 aa9.12□□□□□ -0.95
CD46-213ENST00000471987 PRKAG2Q9UGJ0 569 aa9.12□□□□□ -0.95
CD46-213ENST00000471987 AP4E1Q9UPM8 1137 aa9.12□□□□□ -0.95
CD46-213ENST00000471987 AOC2O75106 756 aa9.11□□□□□ -0.95
CD46-213ENST00000471987 RAB6AP20340 208 aa9.11□□□□□ -0.95
CD46-213ENST00000471987 GP2P55259 537 aaKnown RBP9.11□□□□□ -0.95
CD46-213ENST00000471987 ZAR1Q86SH2 424 aa9.11□□□□□ -0.95
CD46-213ENST00000471987 WNT11O96014 354 aa9.1□□□□□ -0.95
CD46-213ENST00000471987 XRCC5P13010 732 aaKnown RBP9.1□□□□□ -0.95
CD46-213ENST00000471987 FOSL1P15407 271 aa9.1□□□□□ -0.95
CD46-213ENST00000471987 MAPK1P28482 360 aa9.1□□□□□ -0.95
CD46-213ENST00000471987 ASPAP45381 313 aa9.1□□□□□ -0.95
CD46-213ENST00000471987 HNRNPUQ00839 825 aaKnown RBP eCLIP9.1□□□□□ -0.95
CD46-213ENST00000471987 PLCB3Q01970 1234 aa9.1□□□□□ -0.95
CD46-213ENST00000471987 FAAP100Q0VG06 881 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms