RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 MAP3K2Q9Y2U5 619 aa8.71□□□□□ -1.02
SF3A3-205ENST00000470585 NR2E3Q9Y5X4 410 aa8.71□□□□□ -1.02
SF3A3-205ENST00000470585 CSADQ9Y600 493 aa8.71□□□□□ -1.02
SF3A3-205ENST00000470585 SPEF2Q9C093 1822 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 CCL15-CCL14A0A0B4J2E2 113 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 PI4KAP2A4QPH2 592 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 SPDYE5A6NIY4 337 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 GJB1P08034 283 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 MNX1P50219 401 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-205ENST00000470585 MAP3K9P80192 1104 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 CHRNDQ07001 517 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 NEUROD2Q15784 382 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 CCL15Q16663 113 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 NBPF12Q5TAG4 269 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-205ENST00000470585 UBE2Q1Q7Z7E8 422 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 ERO1BQ86YB8 467 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 CERS5Q8N5B7 392 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 PI4KAP1Q8N8J0 262 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.7□□□□□ -1.02
SF3A3-205ENST00000470585 MRIQ9BWK5 157 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 STK31Q9BXU1 1019 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 ARAP2Q8WZ64 1704 aa8.7□□□□□ -1.02
SF3A3-205ENST00000470585 RPAP1Q9BWH6 1393 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-205ENST00000470585 ANKRD18BA2A2Z9 1011 aa8.69□□□□□ -1.02
SF3A3-205ENST00000470585 GJA8P48165 433 aa8.69□□□□□ -1.02
SF3A3-205ENST00000470585 SNAPC2Q13487 334 aa8.69□□□□□ -1.02
SF3A3-205ENST00000470585 GCKRQ14397 625 aa8.69□□□□□ -1.02
SF3A3-205ENST00000470585 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.69□□□□□ -1.02
SF3A3-205ENST00000470585 UBE3BQ7Z3V4 1068 aa8.69□□□□□ -1.02
SF3A3-205ENST00000470585 LINS1Q8NG48 757 aa8.69□□□□□ -1.02
SF3A3-205ENST00000470585 ZNF428Q96B54 188 aa8.69□□□□□ -1.02
SF3A3-205ENST00000470585 PRMT6Q96LA8 375 aaPredicted RBP8.69□□□□□ -1.02
SF3A3-205ENST00000470585 TEPSINQ96N21 525 aa8.69□□□□□ -1.02
SF3A3-205ENST00000470585 CCDC85AQ96PX6 553 aaPredicted RBP8.69□□□□□ -1.02
SF3A3-205ENST00000470585 WTIPA6NIX2 430 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-205ENST00000470585 CASP7P55210 303 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 PPIL2Q13356 520 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 VGLL4Q14135 290 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 FAM83AQ86UY5 434 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 TBC1D22AQ8WUA7 517 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 DCBLD2Q96PD2 775 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 ELP3Q9H9T3 547 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 VEZTQ9HBM0 779 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 ZNF70Q9UC06 446 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-205ENST00000470585 SRRDQ9UH36 339 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 SUGT1Q9Y2Z0 365 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 A0A1B0GUL6 1792 aa8.68□□□□□ -1.02
SF3A3-205ENST00000470585 CLRN2A0PK11 232 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 DLL1O00548 723 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 MAST3O60307 1309 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 KLRK1P26718 216 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 GRK4P32298 578 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 UBXN2AP68543 259 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 CAP1Q01518 475 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 PPATQ06203 517 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 IFIT5Q13325 482 aaKnown RBP8.67□□□□□ -1.02
SF3A3-205ENST00000470585 UBE4AQ14139 1066 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 DCAF15Q66K64 600 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 C17orf99Q6UX52 265 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 ANKRD23Q86SG2 305 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 CCDC146Q8IYE0 955 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 DZIP1LQ8IYY4 767 aaKnown RBP8.67□□□□□ -1.02
SF3A3-205ENST00000470585 FAM43AQ8N2R8 423 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 SLAIN1Q8ND83 568 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 SLC17A8Q8NDX2 589 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 TDRD7Q8NHU6 1098 aaKnown RBP8.67□□□□□ -1.02
SF3A3-205ENST00000470585 SHISA4Q96DD7 197 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 TRIM47Q96LD4 638 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 RBM27Q9P2N5 1060 aaKnown RBP8.67□□□□□ -1.02
SF3A3-205ENST00000470585 LAMA3Q16787 3333 aa8.67□□□□□ -1.02
SF3A3-205ENST00000470585 COL6A3P12111 3177 aa8.66□□□□□ -1.02
SF3A3-205ENST00000470585 RBM5P52756 815 aaKnown RBP eCLIP8.66□□□□□ -1.02
SF3A3-205ENST00000470585 CCDC27Q2M243 656 aa8.66□□□□□ -1.02
SF3A3-205ENST00000470585 MFSD14BQ5SR56 506 aa8.66□□□□□ -1.02
SF3A3-205ENST00000470585 C8orf58Q8NAV2 365 aa8.66□□□□□ -1.02
SF3A3-205ENST00000470585 DPF3Q92784 378 aa8.66□□□□□ -1.02
SF3A3-205ENST00000470585 FZD1Q9UP38 647 aa8.66□□□□□ -1.02
SF3A3-205ENST00000470585 ADAMTS8Q9UP79 889 aa8.66□□□□□ -1.02
SF3A3-205ENST00000470585 IL16Q14005 1332 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 KIF16BQ96L93 1317 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 ADGRA2Q96PE1 1338 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 BTBD19C9JJ37 291 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 ZBTB7BO15156 539 aaPredicted RBP8.65□□□□□ -1.02
SF3A3-205ENST00000470585 BMP8BP34820 402 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 CWF19L2Q2TBE0 894 aaKnown RBP8.65□□□□□ -1.02
SF3A3-205ENST00000470585 RAET1EQ8TD07 263 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 SH3TC2Q8TF17 1288 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 DNAAF4Q8WXU2 420 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 JARID2Q92833 1246 aaPredicted RBP8.65□□□□□ -1.02
SF3A3-205ENST00000470585 TMOD2Q9NZR1 351 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 TTF2Q9UNY4 1162 aaKnown RBP8.65□□□□□ -1.02
SF3A3-205ENST00000470585 KCNH4Q9UQ05 1017 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 SLC45A1Q9Y2W3 748 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 RIPOR2Q9Y4F9 1068 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 SNCAIPQ9Y6H5 919 aa8.65□□□□□ -1.02
SF3A3-205ENST00000470585 ELL2O00472 640 aaPredicted RBP8.64□□□□□ -1.03
SF3A3-205ENST00000470585 IRF6O14896 467 aa8.64□□□□□ -1.03
SF3A3-205ENST00000470585 HIBADHP31937 336 aaKnown RBP8.64□□□□□ -1.03
SF3A3-205ENST00000470585 PSMC4P43686 418 aa8.64□□□□□ -1.03
SF3A3-205ENST00000470585 CRKP46108 304 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms