RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 NLGN1Q8N2Q7 840 aa8.26□□□□□ -1.09
VAMP3-202ENST00000470357 RRAGCQ9HB90 399 aa8.26□□□□□ -1.09
VAMP3-202ENST00000470357 C9orf78Q9NZ63 289 aaPredicted RBP8.26□□□□□ -1.09
VAMP3-202ENST00000470357 ZNF652Q9Y2D9 606 aa8.26□□□□□ -1.09
VAMP3-202ENST00000470357 ZBTB1Q9Y2K1 713 aa8.26□□□□□ -1.09
VAMP3-202ENST00000470357 MAP3K15Q6ZN16 1313 aa8.26□□□□□ -1.09
VAMP3-202ENST00000470357 WNT7AO00755 349 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 NRG2O14511 850 aaPredicted RBP8.25□□□□□ -1.09
VAMP3-202ENST00000470357 GYS1P13807 737 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 WNT7BP56706 349 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 PRR20EP86478 221 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 PRR20CP86479 221 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 PRR20DP86480 221 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 PRR20BP86481 221 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 PRR20AP86496 221 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 TRIM28Q13263 835 aaKnown RBP8.25□□□□□ -1.09
VAMP3-202ENST00000470357 LAPTM4AQ15012 233 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 TMEM259Q4ZIN3 620 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 TRAPPC3LQ5T215 181 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 INTS5Q6P9B9 1019 aaKnown RBP8.25□□□□□ -1.09
VAMP3-202ENST00000470357 DZIP3Q86Y13 1208 aaKnown RBP8.25□□□□□ -1.09
VAMP3-202ENST00000470357 CCDC191Q8NCU4 936 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 MEIS3Q99687 375 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
VAMP3-202ENST00000470357 UTYO14607 1347 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 MYH3P11055 1940 aa8.25□□□□□ -1.09
VAMP3-202ENST00000470357 SCN7AQ01118 1682 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 COL15A1P39059 1388 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 NEURL1BA8MQ27 555 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 GRM8O00222 908 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 RPS6KA4O75676 772 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 HSP90B1P14625 803 aaKnown RBP8.24□□□□□ -1.09
VAMP3-202ENST00000470357 PIP4K2AP48426 406 aaPredicted RBP8.24□□□□□ -1.09
VAMP3-202ENST00000470357 TCIRG1Q13488 830 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 GCKRQ14397 625 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 TTLL7Q6ZT98 887 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 ANKRD44Q8N8A2 993 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 MRGPRX2Q96LB1 330 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 MYD88Q99836 296 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 USP44Q9H0E7 712 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 CWC25Q9NXE8 425 aaPredicted RBP8.24□□□□□ -1.09
VAMP3-202ENST00000470357 KDM2BQ8NHM5 1336 aa8.24□□□□□ -1.09
VAMP3-202ENST00000470357 C4AP0C0L4 1744 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 IGKV5-2P06315 115 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 USP17L8P0C7I0 530 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 HSPA1AP0DMV8 641 aaKnown RBP8.23□□□□□ -1.09
VAMP3-202ENST00000470357 HSPA1BP0DMV9 641 aaKnown RBP8.23□□□□□ -1.09
VAMP3-202ENST00000470357 NR6A1Q15406 480 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 TMEM132AQ24JP5 1023 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 CLEC4GQ6UXB4 293 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 C16orf71Q8IYS4 520 aaPredicted RBP8.23□□□□□ -1.09
VAMP3-202ENST00000470357 CYP4X1Q8N118 509 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 ZNF511Q8NB15 262 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 ISCA1Q9BUE6 129 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 RNF181Q9P0P0 153 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 PIM2Q9P1W9 311 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 RTCBQ9Y3I0 505 aaKnown RBP8.23□□□□□ -1.09
VAMP3-202ENST00000470357 ARFGEF1Q9Y6D6 1849 aa8.23□□□□□ -1.09
VAMP3-202ENST00000470357 CWF19L2Q2TBE0 894 aaKnown RBP8.22□□□□□ -1.09
VAMP3-202ENST00000470357 PARP10Q53GL7 1025 aa8.22□□□□□ -1.09
VAMP3-202ENST00000470357 HSP90AB4PQ58FF6 505 aa8.22□□□□□ -1.09
VAMP3-202ENST00000470357 CEP85Q6P2H3 762 aa8.22□□□□□ -1.09
VAMP3-202ENST00000470357 Q6ZNB5 142 aa8.22□□□□□ -1.09
VAMP3-202ENST00000470357 SMC5Q8IY18 1101 aa8.22□□□□□ -1.09
VAMP3-202ENST00000470357 SMC1BQ8NDV3 1235 aa8.22□□□□□ -1.09
VAMP3-202ENST00000470357 LAMB2P55268 1798 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 POTECB2RU33 542 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 PCCAP05165 728 aaPredicted RBP8.21□□□□□ -1.1
VAMP3-202ENST00000470357 NBPF7P0C2Y1 421 aaPredicted RBP8.21□□□□□ -1.1
VAMP3-202ENST00000470357 CHRNA5P30532 468 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 ATP8B2P98198 1209 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 DDR1Q08345 913 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 MTX1Q13505 466 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 DALRD3Q5D0E6 543 aaKnown RBP8.21□□□□□ -1.1
VAMP3-202ENST00000470357 EHBP1Q8NDI1 1231 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 EPS8L1Q8TE68 723 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 FOXJ1Q92949 421 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 C1orf115Q9H7X2 142 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 HMX1Q9NP08 348 aaPredicted RBP8.21□□□□□ -1.1
VAMP3-202ENST00000470357 TOR4AQ9NXH8 423 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 NARFQ9UHQ1 456 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 LRRFIP2Q9Y608 721 aaKnown RBP8.21□□□□□ -1.1
VAMP3-202ENST00000470357 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 SBF1O95248 1867 aa8.21□□□□□ -1.1
VAMP3-202ENST00000470357 TTC24A2A3L6 582 aaPredicted RBP8.2□□□□□ -1.1
VAMP3-202ENST00000470357 ATP5J2-PTCD1G3V325 749 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 H7C1W4 665 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 CAMTA2O94983 1202 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 IGHDP01880 384 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 TM4SF1P30408 202 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 RFC4P35249 363 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 UBE3BQ7Z3V4 1068 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 PPP1R42Q7Z4L9 355 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 ZNF34Q8IZ26 560 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 ZBTB38Q8NAP3 1195 aaPredicted RBP8.2□□□□□ -1.1
VAMP3-202ENST00000470357 ARMC2Q8NEN0 867 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 SSH3Q8TE77 659 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 DCTPP1Q9H773 170 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 SRP68Q9UHB9 627 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms