RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 C15orf52Q6ZUT6 534 aaKnown RBP23.65■■□□□ 1.38
USP11-205ENST00000467378 USP17L1Q7RTZ2 530 aa23.65■■□□□ 1.38
USP11-205ENST00000467378 EXOC6Q8TAG9 804 aa23.65■■□□□ 1.38
USP11-205ENST00000467378 SURF6O75683 361 aaKnown RBP23.64■■□□□ 1.37
USP11-205ENST00000467378 ALDH1A1P00352 501 aa23.64■■□□□ 1.37
USP11-205ENST00000467378 FGFR2P21802 821 aa23.64■■□□□ 1.37
USP11-205ENST00000467378 KLRK1P26718 216 aa23.64■■□□□ 1.37
USP11-205ENST00000467378 G3BP1Q13283 466 aaKnown RBP eCLIP23.64■■□□□ 1.37
USP11-205ENST00000467378 ARMC9Q7Z3E5 817 aa23.64■■□□□ 1.37
USP11-205ENST00000467378 CEP126Q9P2H0 1117 aa23.64■■□□□ 1.37
USP11-205ENST00000467378 PCDHB15Q9Y5E8 787 aa23.64■■□□□ 1.37
USP11-205ENST00000467378 SASH1O94885 1247 aa23.63■■□□□ 1.37
USP11-205ENST00000467378 OTOP1Q7RTM1 612 aa23.63■■□□□ 1.37
USP11-205ENST00000467378 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.63■■□□□ 1.37
USP11-205ENST00000467378 ZNF646O15015 1829 aaPredicted RBP23.62■■□□□ 1.37
USP11-205ENST00000467378 HMMRO75330 724 aa23.62■■□□□ 1.37
USP11-205ENST00000467378 IRX6P78412 446 aaPredicted RBP23.62■■□□□ 1.37
USP11-205ENST00000467378 AAMPQ13685 434 aa23.62■■□□□ 1.37
USP11-205ENST00000467378 PODNQ7Z5L7 613 aa23.62■■□□□ 1.37
USP11-205ENST00000467378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.62■■□□□ 1.37
USP11-205ENST00000467378 TFCP2Q12800 502 aa23.61■■□□□ 1.37
USP11-205ENST00000467378 PUM3Q15397 648 aaKnown RBP23.61■■□□□ 1.37
USP11-205ENST00000467378 SPRYD7Q5W111 196 aa23.61■■□□□ 1.37
USP11-205ENST00000467378 OGFOD1Q8N543 542 aa23.61■■□□□ 1.37
USP11-205ENST00000467378 ARAP2Q8WZ64 1704 aa23.6■■□□□ 1.37
USP11-205ENST00000467378 WNT10BO00744 389 aa23.6■■□□□ 1.37
USP11-205ENST00000467378 CENPBP07199 599 aaPredicted RBP23.6■■□□□ 1.37
USP11-205ENST00000467378 FBXW7Q969H0 707 aa23.6■■□□□ 1.37
USP11-205ENST00000467378 LPIN2Q92539 896 aa23.59■■□□□ 1.37
USP11-205ENST00000467378 MXD3Q9BW11 206 aa23.59■■□□□ 1.37
USP11-205ENST00000467378 COA1Q9GZY4 146 aa23.59■■□□□ 1.37
USP11-205ENST00000467378 ANGEL1Q9UNK9 670 aaKnown RBP23.59■■□□□ 1.37
USP11-205ENST00000467378 EXOC6BQ9Y2D4 811 aa23.59■■□□□ 1.37
USP11-205ENST00000467378 MANSC4A6NHS7 340 aaPredicted RBP23.58■■□□□ 1.37
USP11-205ENST00000467378 EN2P19622 333 aaPredicted RBP23.58■■□□□ 1.37
USP11-205ENST00000467378 FAM84BQ96KN1 310 aaPredicted RBP23.58■■□□□ 1.37
USP11-205ENST00000467378 LAMB1P07942 1786 aa23.57■■□□□ 1.36
USP11-205ENST00000467378 IFIT1P09914 478 aaKnown RBP23.57■■□□□ 1.36
USP11-205ENST00000467378 INHBEP58166 350 aa23.57■■□□□ 1.36
USP11-205ENST00000467378 OS9Q13438 667 aaPredicted RBP23.57■■□□□ 1.36
USP11-205ENST00000467378 ATP2B3Q16720 1220 aa23.57■■□□□ 1.36
USP11-205ENST00000467378 IFNL1Q8IU54 200 aa23.57■■□□□ 1.36
USP11-205ENST00000467378 ERO1AQ96HE7 468 aa23.57■■□□□ 1.36
USP11-205ENST00000467378 CD209Q9NNX6 404 aa23.57■■□□□ 1.36
USP11-205ENST00000467378 SLC5A1P13866 664 aa23.56■■□□□ 1.36
USP11-205ENST00000467378 GYG1P46976 350 aa23.56■■□□□ 1.36
USP11-205ENST00000467378 TIMM10P62072 90 aa23.56■■□□□ 1.36
USP11-205ENST00000467378 HSP90AB4PQ58FF6 505 aa23.56■■□□□ 1.36
USP11-205ENST00000467378 LDLRAD1Q5T700 205 aa23.56■■□□□ 1.36
USP11-205ENST00000467378 FBXO33Q7Z6M2 555 aa23.56■■□□□ 1.36
USP11-205ENST00000467378 SLC10A4Q96EP9 437 aa23.56■■□□□ 1.36
USP11-205ENST00000467378 COLQQ9Y215 455 aaPredicted RBP23.56■■□□□ 1.36
USP11-205ENST00000467378 AKAP2Q9Y2D5 859 aa23.56■■□□□ 1.36
USP11-205ENST00000467378 PTPN22Q9Y2R2 807 aa23.56■■□□□ 1.36
USP11-205ENST00000467378 DACT2Q5SW24 774 aa23.55■■□□□ 1.36
USP11-205ENST00000467378 ZNF804AQ7Z570 1209 aa23.55■■□□□ 1.36
USP11-205ENST00000467378 APOBEC3FQ8IUX4 373 aaKnown RBP23.55■■□□□ 1.36
USP11-205ENST00000467378 CD99L2Q8TCZ2 262 aa23.55■■□□□ 1.36
USP11-205ENST00000467378 GPR108Q9NPR9 543 aa23.55■■□□□ 1.36
USP11-205ENST00000467378 FZD1Q9UP38 647 aa23.55■■□□□ 1.36
USP11-205ENST00000467378 MYH13Q9UKX3 1938 aa23.55■■□□□ 1.36
USP11-205ENST00000467378 A0A1B0GUL7 405 aa23.54■■□□□ 1.36
USP11-205ENST00000467378 IL1R1P14778 569 aa23.54■■□□□ 1.36
USP11-205ENST00000467378 HIBADHP31937 336 aaKnown RBP23.54■■□□□ 1.36
USP11-205ENST00000467378 ERC1Q8IUD2 1116 aa23.54■■□□□ 1.36
USP11-205ENST00000467378 DCTPP1Q9H773 170 aa23.54■■□□□ 1.36
USP11-205ENST00000467378 MYO3BQ8WXR4 1341 aa23.54■■□□□ 1.36
USP11-205ENST00000467378 CAVIN4Q5BKX8 364 aa23.53■■□□□ 1.36
USP11-205ENST00000467378 RHPN1Q8TCX5 695 aa23.53■■□□□ 1.36
USP11-205ENST00000467378 TMEM106CQ9BVX2 250 aa23.53■■□□□ 1.36
USP11-205ENST00000467378 ECM29Q5VYK3 1845 aa23.52■■□□□ 1.36
USP11-205ENST00000467378 IGF2BP3O00425 579 aaKnown RBP eCLIP23.52■■□□□ 1.36
USP11-205ENST00000467378 RAB11FIP3O75154 756 aa23.52■■□□□ 1.36
USP11-205ENST00000467378 BCAMP50895 628 aa23.52■■□□□ 1.36
USP11-205ENST00000467378 TDRD7Q8NHU6 1098 aaKnown RBP23.52■■□□□ 1.36
USP11-205ENST00000467378 ARMC5Q96C12 935 aa23.52■■□□□ 1.36
USP11-205ENST00000467378 EFCC1Q9HA90 598 aa23.52■■□□□ 1.36
USP11-205ENST00000467378 MKI67P46013 3256 aaKnown RBP23.52■■□□□ 1.36
USP11-205ENST00000467378 ADORA1P30542 326 aa23.51■■□□□ 1.35
USP11-205ENST00000467378 TNNI3KQ59H18 835 aa23.51■■□□□ 1.35
USP11-205ENST00000467378 XAGE2Q96GT9 111 aa23.51■■□□□ 1.35
USP11-205ENST00000467378 WNK4Q96J92 1243 aa23.51■■□□□ 1.35
USP11-205ENST00000467378 FPGT-TNNI3KV9GXZ4 949 aa23.51■■□□□ 1.35
USP11-205ENST00000467378 CEP290O15078 2479 aa23.5■■□□□ 1.35
USP11-205ENST00000467378 ZBTB48P10074 688 aaPredicted RBP23.5■■□□□ 1.35
USP11-205ENST00000467378 HDAC1Q13547 482 aaPredicted RBP23.5■■□□□ 1.35
USP11-205ENST00000467378 STRIP1Q5VSL9 837 aa23.5■■□□□ 1.35
USP11-205ENST00000467378 KIF1BPQ96EK5 621 aa23.5■■□□□ 1.35
USP11-205ENST00000467378 NEUROD6Q96NK8 337 aa23.5■■□□□ 1.35
USP11-205ENST00000467378 TRIOBPQ9H2D6 2365 aa23.49■■□□□ 1.35
USP11-205ENST00000467378 OTUD7BQ6GQQ9 843 aa23.49■■□□□ 1.35
USP11-205ENST00000467378 VPS37DQ86XT2 251 aa23.49■■□□□ 1.35
USP11-205ENST00000467378 KIAA0825Q8IV33 1275 aa23.49■■□□□ 1.35
USP11-205ENST00000467378 EAF2Q96CJ1 260 aaPredicted RBP23.49■■□□□ 1.35
USP11-205ENST00000467378 CLMNQ96JQ2 1002 aa23.49■■□□□ 1.35
USP11-205ENST00000467378 HTTP42858 3142 aa23.48■■□□□ 1.35
USP11-205ENST00000467378 APBB1O00213 710 aa23.48■■□□□ 1.35
USP11-205ENST00000467378 MMP14P50281 582 aa23.48■■□□□ 1.35
USP11-205ENST00000467378 GTF2IP78347 998 aa23.48■■□□□ 1.35
USP11-205ENST00000467378 CRHR2Q13324 411 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms