RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
PSME4-204ENST00000466539 ZCCHC2Q9C0B9 1178 aaKnown RBP8.18□□□□□ -1.1
PSME4-204ENST00000466539 LRRC37A3O60309 1634 aa8.18□□□□□ -1.1
PSME4-204ENST00000466539 NRAPQ86VF7 1730 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 H7C1W4 665 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 DIAPH1O60610 1272 aaKnown RBP8.17□□□□□ -1.1
PSME4-204ENST00000466539 WFS1O76024 890 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 VSIG8P0DPA2 414 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 EIF4A2Q14240 407 aaKnown RBP8.17□□□□□ -1.1
PSME4-204ENST00000466539 RTN1Q16799 776 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 HSP90AB2PQ58FF8 381 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 SV2AQ7L0J3 742 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 TRMT2AQ8IZ69 625 aaKnown RBP8.17□□□□□ -1.1
PSME4-204ENST00000466539 PGBD3Q8N328 593 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 COL26A1Q96A83 441 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 MYO19Q96H55 970 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 SUSD3Q96L08 255 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 CFAP53Q96M91 514 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 PKD1L3Q7Z443 1732 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 NWD2Q9ULI1 1742 aa8.17□□□□□ -1.1
PSME4-204ENST00000466539 COL14A1Q05707 1796 aaKnown RBP8.17□□□□□ -1.1
PSME4-204ENST00000466539 BNIP3LO60238 219 aa8.16□□□□□ -1.1
PSME4-204ENST00000466539 TNNT2P45379 298 aaPredicted RBP8.16□□□□□ -1.1
PSME4-204ENST00000466539 DGKZQ13574 1117 aa8.16□□□□□ -1.1
PSME4-204ENST00000466539 PLCH1Q4KWH8 1693 aa8.16□□□□□ -1.1
PSME4-204ENST00000466539 FAM9BQ8IZU0 186 aa8.16□□□□□ -1.1
PSME4-204ENST00000466539 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
PSME4-204ENST00000466539 NDFIP2Q9NV92 336 aa8.16□□□□□ -1.1
PSME4-204ENST00000466539 VIRMAQ69YN4 1812 aaKnown RBP8.15□□□□□ -1.1
PSME4-204ENST00000466539 WNK3Q9BYP7 1800 aa8.15□□□□□ -1.1
PSME4-204ENST00000466539 TNFRSF10BO14763 440 aa8.15□□□□□ -1.1
PSME4-204ENST00000466539 PTCD1O75127 700 aaKnown RBP8.15□□□□□ -1.1
PSME4-204ENST00000466539 KRT76Q01546 638 aa8.15□□□□□ -1.1
PSME4-204ENST00000466539 XPCQ01831 940 aaPredicted RBP8.15□□□□□ -1.1
PSME4-204ENST00000466539 EFHC2Q5JST6 749 aa8.15□□□□□ -1.1
PSME4-204ENST00000466539 RNFT1Q5M7Z0 435 aa8.15□□□□□ -1.1
PSME4-204ENST00000466539 NLRP8Q86W28 1048 aa8.15□□□□□ -1.1
PSME4-204ENST00000466539 GMCL1Q96IK5 515 aa8.15□□□□□ -1.1
PSME4-204ENST00000466539 DMGDHQ9UI17 866 aaKnown RBP8.15□□□□□ -1.1
PSME4-204ENST00000466539 SHANK3Q9BYB0 1731 aa8.15□□□□□ -1.11
PSME4-204ENST00000466539 COL5A2P05997 1499 aaPredicted RBP8.14□□□□□ -1.11
PSME4-204ENST00000466539 TOM1O60784 492 aa8.14□□□□□ -1.11
PSME4-204ENST00000466539 MTMR3Q13615 1198 aa8.14□□□□□ -1.11
PSME4-204ENST00000466539 GAS6Q14393 721 aa8.14□□□□□ -1.11
PSME4-204ENST00000466539 LBRQ14739 615 aaKnown RBP8.14□□□□□ -1.11
PSME4-204ENST00000466539 C16orf46Q6P387 395 aa8.14□□□□□ -1.11
PSME4-204ENST00000466539 SLC16A10Q8TF71 515 aa8.14□□□□□ -1.11
PSME4-204ENST00000466539 LRRC59Q96AG4 307 aaKnown RBP8.14□□□□□ -1.11
PSME4-204ENST00000466539 RUNDC1Q96C34 613 aa8.14□□□□□ -1.11
PSME4-204ENST00000466539 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
PSME4-204ENST00000466539 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.14□□□□□ -1.11
PSME4-204ENST00000466539 SIPA1L3O60292 1781 aaPredicted RBP8.13□□□□□ -1.11
PSME4-204ENST00000466539 PARP4Q9UKK3 1724 aaKnown RBP8.13□□□□□ -1.11
PSME4-204ENST00000466539 WIPF1O43516 503 aa8.13□□□□□ -1.11
PSME4-204ENST00000466539 GMPRP36959 345 aa8.13□□□□□ -1.11
PSME4-204ENST00000466539 PDE4CQ08493 712 aa8.13□□□□□ -1.11
PSME4-204ENST00000466539 PDE3BQ13370 1112 aa8.13□□□□□ -1.11
PSME4-204ENST00000466539 CNGB1Q14028 1251 aaPredicted RBP8.13□□□□□ -1.11
PSME4-204ENST00000466539 GRIN2CQ14957 1233 aa8.13□□□□□ -1.11
PSME4-204ENST00000466539 C11orf91Q3C1V1 193 aa8.13□□□□□ -1.11
PSME4-204ENST00000466539 GTF3C2Q8WUA4 911 aaPredicted RBP8.13□□□□□ -1.11
PSME4-204ENST00000466539 IRF7Q92985 503 aa8.13□□□□□ -1.11
PSME4-204ENST00000466539 STRN4Q9NRL3 753 aa8.13□□□□□ -1.11
PSME4-204ENST00000466539 NUDCQ9Y266 331 aa8.13□□□□□ -1.11
PSME4-204ENST00000466539 GPC6Q9Y625 555 aaPredicted RBP8.13□□□□□ -1.11
PSME4-204ENST00000466539 DNMT3AQ9Y6K1 912 aaPredicted RBP8.13□□□□□ -1.11
PSME4-204ENST00000466539 KIAA0232Q92628 1395 aa8.12□□□□□ -1.11
PSME4-204ENST00000466539 DCDC2BA2VCK2 349 aa8.12□□□□□ -1.11
PSME4-204ENST00000466539 ZBTB39O15060 712 aa8.12□□□□□ -1.11
PSME4-204ENST00000466539 ATXN7O15265 892 aaPredicted RBP8.12□□□□□ -1.11
PSME4-204ENST00000466539 SERPINB4P48594 390 aa8.12□□□□□ -1.11
PSME4-204ENST00000466539 HNRNPUQ00839 825 aaKnown RBP eCLIP8.12□□□□□ -1.11
PSME4-204ENST00000466539 TNP2Q05952 138 aa8.12□□□□□ -1.11
PSME4-204ENST00000466539 WDR43Q15061 677 aaKnown RBP eCLIP8.12□□□□□ -1.11
PSME4-204ENST00000466539 NUTM2GQ5VZR2 741 aa8.12□□□□□ -1.11
PSME4-204ENST00000466539 ETFBKMTQ8IXQ9 262 aa8.12□□□□□ -1.11
PSME4-204ENST00000466539 COL25A1Q9BXS0 654 aaPredicted RBP8.12□□□□□ -1.11
PSME4-204ENST00000466539 ANO2Q9NQ90 1003 aa8.12□□□□□ -1.11
PSME4-204ENST00000466539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.12□□□□□ -1.111e-8■■■■■ 62.1
PSME4-204ENST00000466539 PCDHGC4Q9Y5F7 938 aa8.12□□□□□ -1.11
PSME4-204ENST00000466539 SLIT2O94813 1529 aa8.12□□□□□ -1.11
PSME4-204ENST00000466539 RNF123Q5XPI4 1314 aa8.11□□□□□ -1.11
PSME4-204ENST00000466539 APAF1O14727 1248 aa8.11□□□□□ -1.11
PSME4-204ENST00000466539 BRD1O95696 1058 aa8.11□□□□□ -1.11
PSME4-204ENST00000466539 GRNP28799 593 aaKnown RBP8.11□□□□□ -1.11
PSME4-204ENST00000466539 INSM1Q01101 510 aaPredicted RBP8.11□□□□□ -1.11
PSME4-204ENST00000466539 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
PSME4-204ENST00000466539 TCP11L2Q8N4U5 519 aa8.11□□□□□ -1.11
PSME4-204ENST00000466539 IFT43Q96FT9 208 aa8.11□□□□□ -1.11
PSME4-204ENST00000466539 PHACTR3Q96KR7 559 aa8.11□□□□□ -1.11
PSME4-204ENST00000466539 NEUROD4Q9HD90 331 aa8.11□□□□□ -1.11
PSME4-204ENST00000466539 GJA3Q9Y6H8 435 aa8.11□□□□□ -1.11
PSME4-204ENST00000466539 OVOS2A0A0G2JMS6 1433 aa8.11□□□□□ -1.11
PSME4-204ENST00000466539 SCN11AQ9UI33 1791 aa8.1□□□□□ -1.11
PSME4-204ENST00000466539 IL16Q14005 1332 aa8.1□□□□□ -1.11
PSME4-204ENST00000466539 TGFBR3LH3BV60 316 aa8.1□□□□□ -1.11
PSME4-204ENST00000466539 KHNYNO15037 678 aaKnown RBP8.1□□□□□ -1.11
PSME4-204ENST00000466539 EFSO43281 561 aa8.1□□□□□ -1.11
PSME4-204ENST00000466539 U2AF1L5P0DN76 240 aaPredicted RBP8.1□□□□□ -1.11
PSME4-204ENST00000466539 MAPTP10636 758 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms