RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ARHGAP45Q92619 1136 aa17.96■□□□□ 0.47
SNRNP40-203ENST00000463988 CFHR5Q9BXR6 569 aa17.96■□□□□ 0.47
SNRNP40-203ENST00000463988 SUGT1Q9Y2Z0 365 aa17.96■□□□□ 0.47
SNRNP40-203ENST00000463988 CIAO1O76071 339 aa17.95■□□□□ 0.46
SNRNP40-203ENST00000463988 ZBTB48P10074 688 aaPredicted RBP17.95■□□□□ 0.46
SNRNP40-203ENST00000463988 IREB2P48200 963 aaKnown RBP17.95■□□□□ 0.46
SNRNP40-203ENST00000463988 RARSP54136 660 aaKnown RBP17.95■□□□□ 0.46
SNRNP40-203ENST00000463988 CHAF1AQ13111 956 aaPredicted RBP17.95■□□□□ 0.46
SNRNP40-203ENST00000463988 ATG9AQ7Z3C6 839 aa17.95■□□□□ 0.46
SNRNP40-203ENST00000463988 CTU1Q7Z7A3 348 aaKnown RBP17.95■□□□□ 0.46
SNRNP40-203ENST00000463988 TDRD3Q9H7E2 651 aaKnown RBP17.95■□□□□ 0.46
SNRNP40-203ENST00000463988 IQSEC3Q9UPP2 1182 aaPredicted RBP17.95■□□□□ 0.46
SNRNP40-203ENST00000463988 MANSC4A6NHS7 340 aaPredicted RBP17.94■□□□□ 0.46
SNRNP40-203ENST00000463988 SLC5A1P13866 664 aa17.94■□□□□ 0.46
SNRNP40-203ENST00000463988 MKRN3Q13064 507 aaKnown RBP17.94■□□□□ 0.46
SNRNP40-203ENST00000463988 FZD1Q9UP38 647 aa17.94■□□□□ 0.46
SNRNP40-203ENST00000463988 MAST3O60307 1309 aa17.94■□□□□ 0.46
SNRNP40-203ENST00000463988 USP2O75604 605 aaPredicted RBP17.93■□□□□ 0.46
SNRNP40-203ENST00000463988 TBC1D8O95759 1140 aa17.93■□□□□ 0.46
SNRNP40-203ENST00000463988 ALDH1A1P00352 501 aa17.93■□□□□ 0.46
SNRNP40-203ENST00000463988 TNNI2P48788 182 aa17.93■□□□□ 0.46
SNRNP40-203ENST00000463988 GRIK5Q16478 980 aa17.93■□□□□ 0.46
SNRNP40-203ENST00000463988 TEKT1Q969V4 418 aa17.93■□□□□ 0.46
SNRNP40-203ENST00000463988 WNK4Q96J92 1243 aa17.93■□□□□ 0.46
SNRNP40-203ENST00000463988 CLMNQ96JQ2 1002 aa17.93■□□□□ 0.46
SNRNP40-203ENST00000463988 TEPSINQ96N21 525 aa17.93■□□□□ 0.46
SNRNP40-203ENST00000463988 INTS3Q68E01 1043 aaKnown RBP17.92■□□□□ 0.46
SNRNP40-203ENST00000463988 ANKRD13AQ8IZ07 590 aa17.92■□□□□ 0.46
SNRNP40-203ENST00000463988 ZDHHC15Q96MV8 337 aa17.92■□□□□ 0.46
SNRNP40-203ENST00000463988 CEP126Q9P2H0 1117 aa17.92■□□□□ 0.46
SNRNP40-203ENST00000463988 GPR25O00155 361 aa17.91■□□□□ 0.46
SNRNP40-203ENST00000463988 PKN2Q16513 984 aaKnown RBP17.91■□□□□ 0.46
SNRNP40-203ENST00000463988 FKBP1CQ5VVH2 108 aa17.91■□□□□ 0.46
SNRNP40-203ENST00000463988 HHIPL2Q6UWX4 724 aa17.91■□□□□ 0.46
SNRNP40-203ENST00000463988 WDR66Q8TBY9 1149 aa17.91■□□□□ 0.46
SNRNP40-203ENST00000463988 ZNF296Q8WUU4 475 aaPredicted RBP17.91■□□□□ 0.46
SNRNP40-203ENST00000463988 LRRFIP2Q9Y608 721 aaKnown RBP17.91■□□□□ 0.46
SNRNP40-203ENST00000463988 TCP10L2B9ZVM9 353 aa17.9■□□□□ 0.46
SNRNP40-203ENST00000463988 ZBTB22O15209 634 aa17.9■□□□□ 0.46
SNRNP40-203ENST00000463988 IL15P40933 162 aaPredicted RBP17.9■□□□□ 0.46
SNRNP40-203ENST00000463988 COPRSQ9NQ92 184 aa17.9■□□□□ 0.46
SNRNP40-203ENST00000463988 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 GNAI3P08754 354 aa17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 ATP2B3Q16720 1220 aa17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 APOBEC3HQ6NTF7 200 aaKnown RBP17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 FAM83AQ86UY5 434 aa17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 IFNL1Q8IU54 200 aa17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 MEIS3Q99687 375 aa17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 TMEM39BQ9GZU3 492 aa17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 SIL1Q9H173 461 aa17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 GNL3LQ9NVN8 582 aaKnown RBP17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 TMOD2Q9NZR1 351 aa17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 LAMB1P07942 1786 aa17.89■□□□□ 0.45
SNRNP40-203ENST00000463988 MLLT1Q03111 559 aaPredicted RBP17.88■□□□□ 0.45
SNRNP40-203ENST00000463988 TESPA1A2RU30 521 aaPredicted RBP17.87■□□□□ 0.45
SNRNP40-203ENST00000463988 SEMA3EO15041 775 aa17.87■□□□□ 0.45
SNRNP40-203ENST00000463988 FKTNO75072 461 aa17.87■□□□□ 0.45
SNRNP40-203ENST00000463988 MTX1Q13505 466 aa17.87■□□□□ 0.45
SNRNP40-203ENST00000463988 OTUD7BQ6GQQ9 843 aa17.87■□□□□ 0.45
SNRNP40-203ENST00000463988 CDAN1Q8IWY9 1227 aa17.87■□□□□ 0.45
SNRNP40-203ENST00000463988 HOOK2Q96ED9 719 aa17.87■□□□□ 0.45
SNRNP40-203ENST00000463988 IGF2BP3O00425 579 aaKnown RBP eCLIP17.86■□□□□ 0.45
SNRNP40-203ENST00000463988 GJA5P36382 358 aa17.86■□□□□ 0.45
SNRNP40-203ENST00000463988 MAP3K9P80192 1104 aa17.86■□□□□ 0.45
SNRNP40-203ENST00000463988 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.86■□□□□ 0.45
SNRNP40-203ENST00000463988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.86■□□□□ 0.45
SNRNP40-203ENST00000463988 R3HDMLQ9H3Y0 253 aa17.86■□□□□ 0.45
SNRNP40-203ENST00000463988 PA2G4Q9UQ80 394 aaKnown RBP17.86■□□□□ 0.45
SNRNP40-203ENST00000463988 SALL1Q9NSC2 1324 aa17.86■□□□□ 0.45
SNRNP40-203ENST00000463988 ATF7IPQ6VMQ6 1270 aa17.85■□□□□ 0.45
SNRNP40-203ENST00000463988 RPAP1Q9BWH6 1393 aaPredicted RBP17.85■□□□□ 0.45
SNRNP40-203ENST00000463988 ELP3Q9H9T3 547 aa17.85■□□□□ 0.45
SNRNP40-203ENST00000463988 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.85■□□□□ 0.45
SNRNP40-203ENST00000463988 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
SNRNP40-203ENST00000463988 TRIM27P14373 513 aa17.84■□□□□ 0.45
SNRNP40-203ENST00000463988 CACNB3P54284 484 aa17.84■□□□□ 0.45
SNRNP40-203ENST00000463988 VGLL4Q14135 290 aa17.84■□□□□ 0.45
SNRNP40-203ENST00000463988 OPTNQ96CV9 577 aa17.84■□□□□ 0.45
SNRNP40-203ENST00000463988 HPS5Q9UPZ3 1129 aa17.84■□□□□ 0.45
SNRNP40-203ENST00000463988 CSADQ9Y600 493 aa17.84■□□□□ 0.45
SNRNP40-203ENST00000463988 OTOFQ9HC10 1997 aa17.84■□□□□ 0.45
SNRNP40-203ENST00000463988 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
SNRNP40-203ENST00000463988 SRGAP3O43295 1099 aa17.83■□□□□ 0.44
SNRNP40-203ENST00000463988 LDHBP07195 334 aaKnown RBP17.83■□□□□ 0.44
SNRNP40-203ENST00000463988 PHKA1P46020 1223 aa17.83■□□□□ 0.44
SNRNP40-203ENST00000463988 FBXO46Q6PJ61 603 aaPredicted RBP17.83■□□□□ 0.44
SNRNP40-203ENST00000463988 MS4A4AQ96JQ5 239 aa17.83■□□□□ 0.44
SNRNP40-203ENST00000463988 DAGLAQ9Y4D2 1042 aa17.83■□□□□ 0.44
SNRNP40-203ENST00000463988 PDS5AQ29RF7 1337 aaKnown RBP17.82■□□□□ 0.44
SNRNP40-203ENST00000463988 GTF2A2P52657 109 aa17.82■□□□□ 0.44
SNRNP40-203ENST00000463988 DCAF15Q66K64 600 aa17.82■□□□□ 0.44
SNRNP40-203ENST00000463988 CCDC102BQ68D86 513 aa17.82■□□□□ 0.44
SNRNP40-203ENST00000463988 ZGPATQ8N5A5 531 aaKnown RBP17.82■□□□□ 0.44
SNRNP40-203ENST00000463988 FAM151AQ8WW52 585 aa17.82■□□□□ 0.44
SNRNP40-203ENST00000463988 PTPN18Q99952 460 aa17.82■□□□□ 0.44
SNRNP40-203ENST00000463988 AKAP2Q9Y2D5 859 aa17.82■□□□□ 0.44
SNRNP40-203ENST00000463988 BCAR3O75815 825 aa17.81■□□□□ 0.44
SNRNP40-203ENST00000463988 GNAI2P04899 355 aa17.81■□□□□ 0.44
SNRNP40-203ENST00000463988 PRDX5P30044 214 aa17.81■□□□□ 0.44
SNRNP40-203ENST00000463988 SPDYE5A6NIY4 337 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms