RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ZIC5Q96T25 663 aa12.64□□□□□ -0.39
SF3A3-204ENST00000462258 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
SF3A3-204ENST00000462258 MAST3O60307 1309 aa12.63□□□□□ -0.39
SF3A3-204ENST00000462258 CA12O43570 354 aa12.63□□□□□ -0.39
SF3A3-204ENST00000462258 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
SF3A3-204ENST00000462258 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
SF3A3-204ENST00000462258 MAST2Q6P0Q8 1798 aa12.62□□□□□ -0.39
SF3A3-204ENST00000462258 UBE2Q2LH0YL09 131 aa12.62□□□□□ -0.39
SF3A3-204ENST00000462258 KIF23Q02241 960 aaPredicted RBP12.62□□□□□ -0.39
SF3A3-204ENST00000462258 TNFAIP1Q13829 316 aa12.62□□□□□ -0.39
SF3A3-204ENST00000462258 PRKG1Q13976 671 aa12.62□□□□□ -0.39
SF3A3-204ENST00000462258 ITPRIPQ8IWB1 547 aa12.62□□□□□ -0.39
SF3A3-204ENST00000462258 DZIP1LQ8IYY4 767 aaKnown RBP12.62□□□□□ -0.39
SF3A3-204ENST00000462258 TEKT1Q969V4 418 aa12.62□□□□□ -0.39
SF3A3-204ENST00000462258 SUGT1Q9Y2Z0 365 aa12.62□□□□□ -0.39
SF3A3-204ENST00000462258 MYH2Q9UKX2 1941 aa12.61□□□□□ -0.39
SF3A3-204ENST00000462258 DOCK2Q92608 1830 aa12.61□□□□□ -0.39
SF3A3-204ENST00000462258 PNMA6EA0A0J9YXQ4 647 aa12.61□□□□□ -0.39
SF3A3-204ENST00000462258 RLBP1P12271 317 aa12.61□□□□□ -0.39
SF3A3-204ENST00000462258 ADORA1P30542 326 aa12.61□□□□□ -0.39
SF3A3-204ENST00000462258 PHKA1P46020 1223 aa12.61□□□□□ -0.39
SF3A3-204ENST00000462258 HDLBPQ00341 1268 aaKnown RBP12.61□□□□□ -0.39
SF3A3-204ENST00000462258 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
SF3A3-204ENST00000462258 ARMC9Q7Z3E5 817 aa12.61□□□□□ -0.39
SF3A3-204ENST00000462258 WDR66Q8TBY9 1149 aa12.61□□□□□ -0.39
SF3A3-204ENST00000462258 TDRD3Q9H7E2 651 aaKnown RBP12.61□□□□□ -0.39
SF3A3-204ENST00000462258 GNL3LQ9NVN8 582 aaKnown RBP12.61□□□□□ -0.39
SF3A3-204ENST00000462258 ZNF70Q9UC06 446 aaPredicted RBP12.61□□□□□ -0.39
SF3A3-204ENST00000462258 ANGEL1Q9UNK9 670 aaKnown RBP12.61□□□□□ -0.39
SF3A3-204ENST00000462258 FZD1Q9UP38 647 aa12.61□□□□□ -0.39
SF3A3-204ENST00000462258 CASP8AP2Q9UKL3 1982 aa12.6□□□□□ -0.39
SF3A3-204ENST00000462258 A0A1B0GUL7 405 aa12.6□□□□□ -0.39
SF3A3-204ENST00000462258 SEMA3EO15041 775 aa12.6□□□□□ -0.39
SF3A3-204ENST00000462258 TFCP2Q12800 502 aa12.6□□□□□ -0.39
SF3A3-204ENST00000462258 RASA3Q14644 834 aa12.6□□□□□ -0.39
SF3A3-204ENST00000462258 C1orf115Q9H7X2 142 aa12.6□□□□□ -0.39
SF3A3-204ENST00000462258 TCP10L2B9ZVM9 353 aa12.59□□□□□ -0.39
SF3A3-204ENST00000462258 PPP1R12BO60237 982 aaPredicted RBP12.59□□□□□ -0.39
SF3A3-204ENST00000462258 TNNI2P48788 182 aa12.59□□□□□ -0.39
SF3A3-204ENST00000462258 SUPT20HL1Q3ZLR7 823 aa12.59□□□□□ -0.39
SF3A3-204ENST00000462258 NBPF12Q5TAG4 269 aaPredicted RBP12.59□□□□□ -0.39
SF3A3-204ENST00000462258 CCDC102BQ68D86 513 aa12.59□□□□□ -0.39
SF3A3-204ENST00000462258 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
SF3A3-204ENST00000462258 SAGE1Q9NXZ1 904 aa12.59□□□□□ -0.39
SF3A3-204ENST00000462258 TMOD2Q9NZR1 351 aa12.59□□□□□ -0.39
SF3A3-204ENST00000462258 DENND2AQ9ULE3 1009 aa12.59□□□□□ -0.39
SF3A3-204ENST00000462258 AKAP2Q9Y2D5 859 aa12.59□□□□□ -0.39
SF3A3-204ENST00000462258 SALL1Q9NSC2 1324 aa12.59□□□□□ -0.39
SF3A3-204ENST00000462258 RPAP1Q9BWH6 1393 aaPredicted RBP12.58□□□□□ -0.4
SF3A3-204ENST00000462258 ZBTB22O15209 634 aa12.58□□□□□ -0.4
SF3A3-204ENST00000462258 PRDX5P30044 214 aa12.58□□□□□ -0.4
SF3A3-204ENST00000462258 MKRN3Q13064 507 aaKnown RBP12.58□□□□□ -0.4
SF3A3-204ENST00000462258 RASGRF1Q13972 1273 aa12.58□□□□□ -0.4
SF3A3-204ENST00000462258 MVPQ14764 893 aaKnown RBP12.58□□□□□ -0.4
SF3A3-204ENST00000462258 MAP3K11Q16584 847 aa12.58□□□□□ -0.4
SF3A3-204ENST00000462258 LDLRAD1Q5T700 205 aa12.58□□□□□ -0.4
SF3A3-204ENST00000462258 CDAN1Q8IWY9 1227 aa12.58□□□□□ -0.4
SF3A3-204ENST00000462258 REM2Q8IYK8 340 aaPredicted RBP12.58□□□□□ -0.4
SF3A3-204ENST00000462258 XAGE2Q96GT9 111 aa12.58□□□□□ -0.4
SF3A3-204ENST00000462258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.58□□□□□ -0.4
SF3A3-204ENST00000462258 PDS5AQ29RF7 1337 aaKnown RBP12.58□□□□□ -0.4
SF3A3-204ENST00000462258 CAPN15O75808 1086 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 LDHBP07195 334 aaKnown RBP12.57□□□□□ -0.4
SF3A3-204ENST00000462258 IREB2P48200 963 aaKnown RBP12.57□□□□□ -0.4
SF3A3-204ENST00000462258 CACNB3P54284 484 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 TIMM10P62072 90 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 G3BP1Q13283 466 aaKnown RBP eCLIP12.57□□□□□ -0.4
SF3A3-204ENST00000462258 POLA2Q14181 598 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 DIXDC1Q155Q3 683 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 APOBEC3HQ6NTF7 200 aaKnown RBP12.57□□□□□ -0.4
SF3A3-204ENST00000462258 HHIPL2Q6UWX4 724 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 ZGPATQ8N5A5 531 aaKnown RBP12.57□□□□□ -0.4
SF3A3-204ENST00000462258 PANK1Q8TE04 598 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 SSH3Q8TE77 659 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 TEPSINQ96N21 525 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 CSRNP1Q96S65 589 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 MRIQ9BWK5 157 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 TMEM39BQ9GZU3 492 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 DAGLAQ9Y4D2 1042 aa12.57□□□□□ -0.4
SF3A3-204ENST00000462258 AK9Q5TCS8 1911 aa12.56□□□□□ -0.4
SF3A3-204ENST00000462258 ZBTB7BO15156 539 aaPredicted RBP12.56□□□□□ -0.4
SF3A3-204ENST00000462258 OS9Q13438 667 aaPredicted RBP12.56□□□□□ -0.4
SF3A3-204ENST00000462258 CLMNQ96JQ2 1002 aa12.56□□□□□ -0.4
SF3A3-204ENST00000462258 NEUROD6Q96NK8 337 aa12.56□□□□□ -0.4
SF3A3-204ENST00000462258 RNF186Q9NXI6 227 aa12.56□□□□□ -0.4
SF3A3-204ENST00000462258 UNCXA6NJT0 531 aa12.55□□□□□ -0.4
SF3A3-204ENST00000462258 TRPA1O75762 1119 aa12.55□□□□□ -0.4
SF3A3-204ENST00000462258 MS4A1P11836 297 aa12.55□□□□□ -0.4
SF3A3-204ENST00000462258 ATP8B2P98198 1209 aa12.55□□□□□ -0.4
SF3A3-204ENST00000462258 SREBF2Q12772 1141 aa12.55□□□□□ -0.4
SF3A3-204ENST00000462258 GORABQ5T7V8 394 aa12.55□□□□□ -0.4
SF3A3-204ENST00000462258 FKBP1CQ5VVH2 108 aa12.55□□□□□ -0.4
SF3A3-204ENST00000462258 SPRYD7Q5W111 196 aa12.55□□□□□ -0.4
SF3A3-204ENST00000462258 FAM83AQ86UY5 434 aa12.55□□□□□ -0.4
SF3A3-204ENST00000462258 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
SF3A3-204ENST00000462258 WNK4Q96J92 1243 aa12.55□□□□□ -0.4
SF3A3-204ENST00000462258 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.55□□□□□ -0.4
SF3A3-204ENST00000462258 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
SF3A3-204ENST00000462258 CEP85Q6P2H3 762 aa12.54□□□□□ -0.4
SF3A3-204ENST00000462258 ANKRD13AQ8IZ07 590 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms