RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	NOM1	Q5C9Z4	860 aa	Known RBP	15.81	■□□□□ 0.12
FDPS-204	ENST00000461507	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	15.81	■□□□□ 0.12
FDPS-204	ENST00000461507	TBC1D22A	Q8WUA7	517 aa		15.81	■□□□□ 0.12
FDPS-204	ENST00000461507	SIL1	Q9H173	461 aa		15.81	■□□□□ 0.12
FDPS-204	ENST00000461507	FBXO3	Q9UK99	471 aa		15.81	■□□□□ 0.12
FDPS-204	ENST00000461507	TTF2	Q9UNY4	1162 aa	Known RBP	15.81	■□□□□ 0.12
FDPS-204	ENST00000461507	GNAI2	P04899	355 aa		15.8	■□□□□ 0.12
FDPS-204	ENST00000461507	RLBP1	P12271	317 aa		15.8	■□□□□ 0.12
FDPS-204	ENST00000461507	DGKZ	Q13574	1117 aa		15.8	■□□□□ 0.12
FDPS-204	ENST00000461507	TNFAIP1	Q13829	316 aa		15.8	■□□□□ 0.12
FDPS-204	ENST00000461507	SPRYD7	Q5W111	196 aa		15.8	■□□□□ 0.12
FDPS-204	ENST00000461507	ANGEL1	Q9UNK9	670 aa	Known RBP	15.8	■□□□□ 0.12
FDPS-204	ENST00000461507	ZBTB22	O15209	634 aa		15.79	■□□□□ 0.12
FDPS-204	ENST00000461507	CRK	P46108	304 aa		15.79	■□□□□ 0.12
FDPS-204	ENST00000461507	SREBF2	Q12772	1141 aa		15.79	■□□□□ 0.12
FDPS-204	ENST00000461507	GRIK5	Q16478	980 aa		15.79	■□□□□ 0.12
FDPS-204	ENST00000461507	SUPT20HL1	Q3ZLR7	823 aa		15.79	■□□□□ 0.12
FDPS-204	ENST00000461507	CAVIN4	Q5BKX8	364 aa		15.79	■□□□□ 0.12
FDPS-204	ENST00000461507	ATG9A	Q7Z3C6	839 aa		15.79	■□□□□ 0.12
FDPS-204	ENST00000461507	C1orf115	Q9H7X2	142 aa		15.79	■□□□□ 0.12
FDPS-204	ENST00000461507	VEZT	Q9HBM0	779 aa		15.79	■□□□□ 0.12
FDPS-204	ENST00000461507	ZNF70	Q9UC06	446 aa	Predicted RBP	15.79	■□□□□ 0.12
FDPS-204	ENST00000461507	SRGAP3	O43295	1099 aa		15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	PPP1R12B	O60237	982 aa	Predicted RBP	15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	CIAO1	O76071	339 aa		15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	ZBTB48	P10074	688 aa	Predicted RBP	15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	RGS19	P49795	217 aa		15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	RASA3	Q14644	834 aa		15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	NBPF12	Q5TAG4	269 aa	Predicted RBP	15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	VPS37D	Q86XT2	251 aa		15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	TEPSIN	Q96N21	525 aa		15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	MRI	Q9BWK5	157 aa		15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	SUGT1	Q9Y2Z0	365 aa		15.78	■□□□□ 0.12
FDPS-204	ENST00000461507	IFIT1	P09914	478 aa	Known RBP	15.77	■□□□□ 0.12
FDPS-204	ENST00000461507	BCAM	P50895	628 aa		15.77	■□□□□ 0.12
FDPS-204	ENST00000461507	RBM5	P52756	815 aa	Known RBP eCLIP	15.77	■□□□□ 0.12
FDPS-204	ENST00000461507	PRKG1	Q13976	671 aa		15.77	■□□□□ 0.12
FDPS-204	ENST00000461507	LPIN2	Q92539	896 aa		15.77	■□□□□ 0.12
FDPS-204	ENST00000461507	FZD1	Q9UP38	647 aa		15.77	■□□□□ 0.12
FDPS-204	ENST00000461507	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	15.77	■□□□□ 0.12
FDPS-204	ENST00000461507	COG6	Q9Y2V7	657 aa		15.77	■□□□□ 0.12
FDPS-204	ENST00000461507	RPAP1	Q9BWH6	1393 aa	Predicted RBP	15.76	■□□□□ 0.11
FDPS-204	ENST00000461507	MAST3	O60307	1309 aa		15.76	■□□□□ 0.11
FDPS-204	ENST00000461507	SLC5A1	P13866	664 aa		15.76	■□□□□ 0.11
FDPS-204	ENST00000461507	CTU1	Q7Z7A3	348 aa	Known RBP	15.76	■□□□□ 0.11
FDPS-204	ENST00000461507	WNK4	Q96J92	1243 aa		15.76	■□□□□ 0.11
FDPS-204	ENST00000461507	CLMN	Q96JQ2	1002 aa		15.76	■□□□□ 0.11
FDPS-204	ENST00000461507	TDRD3	Q9H7E2	651 aa	Known RBP	15.76	■□□□□ 0.11
FDPS-204	ENST00000461507	PA2G4	Q9UQ80	394 aa	Known RBP	15.76	■□□□□ 0.11
FDPS-204	ENST00000461507	MANSC4	A6NHS7	340 aa	Predicted RBP	15.75	■□□□□ 0.11
FDPS-204	ENST00000461507	CCDC85C	A6NKD9	419 aa		15.75	■□□□□ 0.11
FDPS-204	ENST00000461507	USP2	O75604	605 aa	Predicted RBP	15.75	■□□□□ 0.11
FDPS-204	ENST00000461507	IREB2	P48200	963 aa	Known RBP	15.75	■□□□□ 0.11
FDPS-204	ENST00000461507	CHAF1A	Q13111	956 aa	Predicted RBP	15.75	■□□□□ 0.11
FDPS-204	ENST00000461507	FKBP1C	Q5VVH2	108 aa		15.75	■□□□□ 0.11
FDPS-204	ENST00000461507	TEKT1	Q969V4	418 aa		15.75	■□□□□ 0.11
FDPS-204	ENST00000461507	ZDHHC15	Q96MV8	337 aa		15.75	■□□□□ 0.11
FDPS-204	ENST00000461507	COPRS	Q9NQ92	184 aa		15.75	■□□□□ 0.11
FDPS-204	ENST00000461507	ALDH1A1	P00352	501 aa		15.74	■□□□□ 0.11
FDPS-204	ENST00000461507	INHBE	P58166	350 aa		15.74	■□□□□ 0.11
FDPS-204	ENST00000461507	MKRN3	Q13064	507 aa	Known RBP	15.74	■□□□□ 0.11
FDPS-204	ENST00000461507	MTX1	Q13505	466 aa		15.74	■□□□□ 0.11
FDPS-204	ENST00000461507	HHIPL2	Q6UWX4	724 aa		15.74	■□□□□ 0.11
FDPS-204	ENST00000461507	CDAN1	Q8IWY9	1227 aa		15.74	■□□□□ 0.11
FDPS-204	ENST00000461507	ANKRD13A	Q8IZ07	590 aa		15.74	■□□□□ 0.11
FDPS-204	ENST00000461507	ZNF296	Q8WUU4	475 aa	Predicted RBP	15.74	■□□□□ 0.11
FDPS-204	ENST00000461507	SLC10A4	Q96EP9	437 aa		15.74	■□□□□ 0.11
FDPS-204	ENST00000461507	GPR25	O00155	361 aa		15.73	■□□□□ 0.11
FDPS-204	ENST00000461507	FRAT2	O75474	233 aa	Predicted RBP	15.73	■□□□□ 0.11
FDPS-204	ENST00000461507	TBC1D8	O95759	1140 aa		15.73	■□□□□ 0.11
FDPS-204	ENST00000461507	IL15	P40933	162 aa	Predicted RBP	15.73	■□□□□ 0.11
FDPS-204	ENST00000461507	TNNI2	P48788	182 aa		15.73	■□□□□ 0.11
FDPS-204	ENST00000461507	OS9	Q13438	667 aa	Predicted RBP	15.73	■□□□□ 0.11
FDPS-204	ENST00000461507	MVP	Q14764	893 aa	Known RBP	15.73	■□□□□ 0.11
FDPS-204	ENST00000461507	ATP2B3	Q16720	1220 aa		15.73	■□□□□ 0.11
FDPS-204	ENST00000461507	WDR66	Q8TBY9	1149 aa		15.73	■□□□□ 0.11
FDPS-204	ENST00000461507	SALL1	Q9NSC2	1324 aa		15.72	■□□□□ 0.11
FDPS-204	ENST00000461507	TESPA1	A2RU30	521 aa	Predicted RBP	15.72	■□□□□ 0.11
FDPS-204	ENST00000461507	GJA5	P36382	358 aa		15.72	■□□□□ 0.11
FDPS-204	ENST00000461507	C20orf194	Q5TEA3	1177 aa		15.72	■□□□□ 0.11
FDPS-204	ENST00000461507	APOBEC3H	Q6NTF7	200 aa	Known RBP	15.72	■□□□□ 0.11
FDPS-204	ENST00000461507	FAM83A	Q86UY5	434 aa		15.72	■□□□□ 0.11
FDPS-204	ENST00000461507	IFNL1	Q8IU54	200 aa		15.72	■□□□□ 0.11
FDPS-204	ENST00000461507	TMEM39B	Q9GZU3	492 aa		15.72	■□□□□ 0.11
FDPS-204	ENST00000461507	CEP126	Q9P2H0	1117 aa		15.72	■□□□□ 0.11
FDPS-204	ENST00000461507	DDX19B	Q9UMR2	479 aa		15.72	■□□□□ 0.11
FDPS-204	ENST00000461507	PNMA6E	A0A0J9YXQ4	647 aa		15.71	■□□□□ 0.11
FDPS-204	ENST00000461507	TCP10L2	B9ZVM9	353 aa		15.71	■□□□□ 0.11
FDPS-204	ENST00000461507	IGF2BP3	O00425	579 aa	Known RBP eCLIP	15.71	■□□□□ 0.11
FDPS-204	ENST00000461507	SEMA3E	O15041	775 aa		15.71	■□□□□ 0.11
FDPS-204	ENST00000461507	ZBTB7B	O15156	539 aa	Predicted RBP	15.71	■□□□□ 0.11
FDPS-204	ENST00000461507	PKN2	Q16513	984 aa	Known RBP	15.71	■□□□□ 0.11
FDPS-204	ENST00000461507	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	15.71	■□□□□ 0.11
FDPS-204	ENST00000461507	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	15.71	■□□□□ 0.11
FDPS-204	ENST00000461507	PDS5A	Q29RF7	1337 aa	Known RBP	15.7	■□□□□ 0.1
FDPS-204	ENST00000461507	G3BP1	Q13283	466 aa	Known RBP eCLIP	15.7	■□□□□ 0.1	2e-7	■■■□□ 15.4
FDPS-204	ENST00000461507	R3HDML	Q9H3Y0	253 aa		15.7	■□□□□ 0.1
FDPS-204	ENST00000461507	CHMP4B	Q9H444	224 aa	Known RBP	15.7	■□□□□ 0.1
FDPS-204	ENST00000461507	DOCK2	Q92608	1830 aa		15.7	■□□□□ 0.1
FDPS-204	ENST00000461507	MYH2	Q9UKX2	1941 aa		15.69	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms