RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 SLC17A8Q8NDX2 589 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 FMNL2Q96PY5 1086 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 HDAC9Q9UKV0 1011 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 PCDHGC3Q9UN70 934 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 ABCC12Q96J65 1359 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 CACNA1SQ13698 1873 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 PCNTO95613 3336 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 UNCXA6NJT0 531 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 PPIP5K2O43314 1243 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 BBOX1O75936 387 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 CD46P15529 392 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 Q3C1V9 767 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 KRT26Q7Z3Y9 468 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 SP8Q8IXZ3 490 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 TTC5Q8N0Z6 440 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 RBM17Q96I25 401 aaKnown RBP2.88□□□□□ -1.95
NEDD1-204ENST00000457368 ZFAND3Q9H8U3 227 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 GPCPD1Q9NPB8 672 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 POLR3EQ9NVU0 708 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 CNOT7Q9UIV1 285 aaKnown RBP2.88□□□□□ -1.95
NEDD1-204ENST00000457368 A1BGP04217 495 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 SSTR3P32745 418 aaPredicted RBP2.88□□□□□ -1.95
NEDD1-204ENST00000457368 INHBEP58166 350 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 ZNF280AP59817 542 aaPredicted RBP2.88□□□□□ -1.95
NEDD1-204ENST00000457368 SREBF2Q12772 1141 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 TREML4Q6UXN2 200 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 SNIP1Q8TAD8 396 aaKnown RBP2.88□□□□□ -1.95
NEDD1-204ENST00000457368 PRR7Q8TB68 274 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 PCDHB15Q9Y5E8 787 aa2.88□□□□□ -1.95
NEDD1-204ENST00000457368 CDC14CA4D256 554 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 YDJCA8MPS7 323 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 NPHP1O15259 732 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 BMP2P12643 396 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 MMP14P50281 582 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 MTHFSDQ2M296 383 aaKnown RBP2.87□□□□□ -1.95
NEDD1-204ENST00000457368 OTOP1Q7RTM1 612 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 NPM2Q86SE8 214 aaKnown RBP2.87□□□□□ -1.95
NEDD1-204ENST00000457368 DCPSQ96C86 337 aaKnown RBP2.87□□□□□ -1.95
NEDD1-204ENST00000457368 NIP7Q9Y221 180 aaKnown RBP eCLIP2.87□□□□□ -1.95
NEDD1-204ENST00000457368 PTPN22Q9Y2R2 807 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 WNT7AO00755 349 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 SIPA1L3O60292 1781 aaPredicted RBP2.87□□□□□ -1.95
NEDD1-204ENST00000457368 CLCN1P35523 988 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 AOC3Q16853 763 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 UBE2Q1Q7Z7E8 422 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 IL17REQ8NFR9 667 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 GAS2L2Q8NHY3 880 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 RPGRQ92834 1020 aaKnown RBP2.87□□□□□ -1.95
NEDD1-204ENST00000457368 CDCA5Q96FF9 252 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 ZNF333Q96JL9 665 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 BCL2L13Q9BXK5 485 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 UNC93B1Q9H1C4 597 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 ZNF408Q9H9D4 720 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 AKAP11Q9UKA4 1901 aa2.87□□□□□ -1.95
NEDD1-204ENST00000457368 H0YGN5 161 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 SNRPA1P09661 255 aaKnown RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 SH3BP2P78314 561 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 NFX1Q12986 1120 aaKnown RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 LDLRAD1Q5T700 205 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 NBPF10Q6P3W6 841 aaKnown RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 GIGYF2Q6Y7W6 1299 aaKnown RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 ZNF34Q8IZ26 560 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 ITPKCQ96DU7 683 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 ERO1AQ96HE7 468 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 STXBP5LQ9Y2K9 1186 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 DUOX1Q9NRD9 1551 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 ERBB4Q15303 1308 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 MAP3K15Q6ZN16 1313 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 MANSC4A6NHS7 340 aaPredicted RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 ADM5C9JUS6 153 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 PER1O15534 1290 aaPredicted RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 NTSR2O95665 410 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 TBC1D8O95759 1140 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 VIL1P09327 827 aaKnown RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 CCNYL3P0C7X3 344 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 MAP3K11Q16584 847 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 PARP10Q53GL7 1025 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 GMLQ99445 158 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 TMX4Q9H1E5 349 aaPredicted RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 USP16Q9Y5T5 823 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 KDM3BQ7LBC6 1761 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 PRAMEF22A3QJZ6 481 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 GNAT3A8MTJ3 354 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 TERTO14746 1132 aaKnown RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 EN2P19622 333 aaPredicted RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 FSHRP23945 695 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 GMPRP36959 345 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 TEFQ10587 303 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 NNTQ13423 1086 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 HLFQ16534 295 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 KIF4BQ2VIQ3 1234 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 RETREG3Q86VR2 466 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 MPNDQ8N594 471 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 AGBL3Q8NEM8 1001 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 FOXJ1Q92949 421 aa2.86□□□□□ -1.95
NEDD1-204ENST00000457368 FAM217BQ9NTX9 383 aaPredicted RBP2.86□□□□□ -1.95
NEDD1-204ENST00000457368 COL1A1P02452 1464 aaPredicted RBP2.85□□□□□ -1.95
NEDD1-204ENST00000457368 LAMB1P07942 1786 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 LRRC37AA6NMS7 1700 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 RTL9Q8NET4 1388 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms