RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 GORABQ5T7V8 394 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 ANO1Q5XXA6 986 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 ZNF397Q8NF99 534 aaPredicted RBP20.54■□□□□ 0.88
PTPN6-204ENST00000456013 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 IFNKQ9P0W0 207 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 MORC2Q9Y6X9 1032 aaPredicted RBP20.54■□□□□ 0.88
PTPN6-204ENST00000456013 KCPQ6ZWJ8 1503 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 PAPPAQ13219 1627 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 KIF28PB7ZC32 967 aa20.53■□□□□ 0.88
PTPN6-204ENST00000456013 ADORA1P30542 326 aa20.53■□□□□ 0.88
PTPN6-204ENST00000456013 KIF23Q02241 960 aaPredicted RBP20.53■□□□□ 0.88
PTPN6-204ENST00000456013 CCDC57Q2TAC2 916 aa20.53■□□□□ 0.88
PTPN6-204ENST00000456013 ABCC12Q96J65 1359 aa20.53■□□□□ 0.88
PTPN6-204ENST00000456013 PSDA5PKW4 1024 aaPredicted RBP20.53■□□□□ 0.88
PTPN6-204ENST00000456013 SMC2O95347 1197 aa20.53■□□□□ 0.88
PTPN6-204ENST00000456013 NCAPHQ15003 741 aa20.53■□□□□ 0.88
PTPN6-204ENST00000456013 E4F1Q66K89 784 aaPredicted RBP20.53■□□□□ 0.88
PTPN6-204ENST00000456013 DDX17Q92841 729 aaKnown RBP20.53■□□□□ 0.88
PTPN6-204ENST00000456013 ARMCX5Q6P1M9 558 aa20.52■□□□□ 0.88
PTPN6-204ENST00000456013 TMC6Q7Z403 805 aa20.52■□□□□ 0.88
PTPN6-204ENST00000456013 RALYLQ86SE5 291 aaKnown RBP20.52■□□□□ 0.88
PTPN6-204ENST00000456013 SLU7O95391 586 aaKnown RBP20.52■□□□□ 0.88
PTPN6-204ENST00000456013 PFKFB1P16118 471 aa20.52■□□□□ 0.88
PTPN6-204ENST00000456013 TIGD1Q96MW7 591 aa20.52■□□□□ 0.88
PTPN6-204ENST00000456013 ISCA1Q9BUE6 129 aa20.52■□□□□ 0.88
PTPN6-204ENST00000456013 PUS7LQ9H0K6 701 aaKnown RBP20.52■□□□□ 0.88
PTPN6-204ENST00000456013 CPDO75976 1380 aa20.51■□□□□ 0.87
PTPN6-204ENST00000456013 ZNF213O14771 459 aa20.51■□□□□ 0.87
PTPN6-204ENST00000456013 GJB4Q9NTQ9 266 aa20.51■□□□□ 0.87
PTPN6-204ENST00000456013 ERVV-2B6SEH9 535 aa20.51■□□□□ 0.87
PTPN6-204ENST00000456013 BIN1O00499 593 aa20.51■□□□□ 0.87
PTPN6-204ENST00000456013 IKBKBO14920 756 aa20.51■□□□□ 0.87
PTPN6-204ENST00000456013 SFPQP23246 707 aaKnown RBP eCLIP20.51■□□□□ 0.87
PTPN6-204ENST00000456013 ZAP70P43403 619 aa20.51■□□□□ 0.87
PTPN6-204ENST00000456013 SCARF1Q14162 830 aa20.51■□□□□ 0.87
PTPN6-204ENST00000456013 SLC39A14Q15043 492 aa20.51■□□□□ 0.87
PTPN6-204ENST00000456013 TNS3Q68CZ2 1445 aa20.51■□□□□ 0.87
PTPN6-204ENST00000456013 PCDH11XQ9BZA7 1347 aa20.5■□□□□ 0.87
PTPN6-204ENST00000456013 PCDH11YQ9BZA8 1340 aa20.5■□□□□ 0.87
PTPN6-204ENST00000456013 KMT5BQ4FZB7 885 aa20.5■□□□□ 0.87
PTPN6-204ENST00000456013 PPP1R13BQ96KQ4 1090 aa20.5■□□□□ 0.87
PTPN6-204ENST00000456013 GPAA1O43292 621 aa20.5■□□□□ 0.87
PTPN6-204ENST00000456013 TUBB4AP04350 444 aa20.5■□□□□ 0.87
PTPN6-204ENST00000456013 RAB11FIP4Q86YS3 637 aa20.5■□□□□ 0.87
PTPN6-204ENST00000456013 L2HGDHQ9H9P8 463 aa20.5■□□□□ 0.87
PTPN6-204ENST00000456013 AKAP11Q9UKA4 1901 aa20.49■□□□□ 0.87
PTPN6-204ENST00000456013 NRDCO43847 1150 aa20.49■□□□□ 0.87
PTPN6-204ENST00000456013 WDHD1O75717 1129 aaPredicted RBP20.49■□□□□ 0.87
PTPN6-204ENST00000456013 ATF3P18847 181 aa20.49■□□□□ 0.87
PTPN6-204ENST00000456013 GABPB1Q06547 395 aaPredicted RBP20.49■□□□□ 0.87
PTPN6-204ENST00000456013 MROH7-TTC4A0A0A0MT08 1334 aa20.49■□□□□ 0.87
PTPN6-204ENST00000456013 TUBE1Q9UJT0 475 aa20.49■□□□□ 0.87
PTPN6-204ENST00000456013 ZMYM6O95789 1325 aa20.48■□□□□ 0.87
PTPN6-204ENST00000456013 FANCCQ00597 558 aa20.48■□□□□ 0.87
PTPN6-204ENST00000456013 TCIRG1Q13488 830 aa20.48■□□□□ 0.87
PTPN6-204ENST00000456013 ZCRB1Q8TBF4 217 aaKnown RBP20.48■□□□□ 0.87
PTPN6-204ENST00000456013 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.48■□□□□ 0.87
PTPN6-204ENST00000456013 V9GYY5 206 aaPredicted RBP20.48■□□□□ 0.87
PTPN6-204ENST00000456013 ECM29Q5VYK3 1845 aa20.48■□□□□ 0.87
PTPN6-204ENST00000456013 PPP6R2O75170 966 aa20.48■□□□□ 0.87
PTPN6-204ENST00000456013 ELF2Q15723 593 aa20.48■□□□□ 0.87
PTPN6-204ENST00000456013 HSP90AB3PQ58FF7 597 aa20.48■□□□□ 0.87
PTPN6-204ENST00000456013 BCL11BQ9C0K0 894 aaPredicted RBP20.48■□□□□ 0.87
PTPN6-204ENST00000456013 HPSEQ9Y251 543 aa20.48■□□□□ 0.87
PTPN6-204ENST00000456013 SYKP43405 635 aa20.47■□□□□ 0.87
PTPN6-204ENST00000456013 PLA2G12BQ9BX93 195 aa20.47■□□□□ 0.87
PTPN6-204ENST00000456013 TRDNQ13061 729 aa20.46■□□□□ 0.87
PTPN6-204ENST00000456013 TRIM28Q13263 835 aaKnown RBP20.46■□□□□ 0.87
PTPN6-204ENST00000456013 FBXO38Q6PIJ6 1188 aa20.46■□□□□ 0.87
PTPN6-204ENST00000456013 HSD3B7Q9H2F3 369 aa20.46■□□□□ 0.87
PTPN6-204ENST00000456013 FAM53CQ9NYF3 392 aa20.46■□□□□ 0.87
PTPN6-204ENST00000456013 ANGEL1Q9UNK9 670 aaKnown RBP20.46■□□□□ 0.87
PTPN6-204ENST00000456013 CSF1RP07333 972 aa20.46■□□□□ 0.87
PTPN6-204ENST00000456013 LMOD1P29536 600 aaPredicted RBP20.46■□□□□ 0.87
PTPN6-204ENST00000456013 MARCKSP29966 332 aaPredicted RBP20.46■□□□□ 0.87
PTPN6-204ENST00000456013 ALG1Q9BT22 464 aa20.46■□□□□ 0.87
PTPN6-204ENST00000456013 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.46■□□□□ 0.87
PTPN6-204ENST00000456013 NBPF3Q9H094 633 aa20.46■□□□□ 0.87
PTPN6-204ENST00000456013 FAM237AA0A1B0GTK4 181 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 CDKL5O76039 1030 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 PCCAP05165 728 aaPredicted RBP20.45■□□□□ 0.86
PTPN6-204ENST00000456013 NKX1-1Q15270 411 aaPredicted RBP20.45■□□□□ 0.86
PTPN6-204ENST00000456013 CCDC93Q567U6 631 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 TAF7LQ5H9L4 462 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 PI16Q6UXB8 463 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 KRT222Q8N1A0 295 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 JMYQ8N9B5 988 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 DCCP43146 1447 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 TNS2Q63HR2 1409 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 PTPAQ15257 358 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 SYT10Q6XYQ8 523 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 VPS37DQ86XT2 251 aa20.45■□□□□ 0.86
PTPN6-204ENST00000456013 ATRNO75882 1429 aa20.44■□□□□ 0.86
PTPN6-204ENST00000456013 ADD2P35612 726 aa20.44■□□□□ 0.86
PTPN6-204ENST00000456013 METAP2P50579 478 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTPN6-204ENST00000456013 IFIT5Q13325 482 aaKnown RBP20.44■□□□□ 0.86
PTPN6-204ENST00000456013 KRT40Q6A162 431 aa20.44■□□□□ 0.86
PTPN6-204ENST00000456013 RIC1Q4ADV7 1423 aa20.44■□□□□ 0.86
PTPN6-204ENST00000456013 SH2B2O14492 632 aaPredicted RBP20.44■□□□□ 0.86
PTPN6-204ENST00000456013 CCP110O43303 1012 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms