RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 SUPT20HL1Q3ZLR7 823 aa23.17■■□□□ 1.3
UBE2D4-208ENST00000454350 API5Q9BZZ5 524 aaKnown RBP23.17■■□□□ 1.3
UBE2D4-208ENST00000454350 PPP1R12BO60237 982 aaPredicted RBP23.16■■□□□ 1.3
UBE2D4-208ENST00000454350 TBC1D22AQ8WUA7 517 aa23.16■■□□□ 1.3
UBE2D4-208ENST00000454350 MEIS3Q99687 375 aa23.16■■□□□ 1.3
UBE2D4-208ENST00000454350 CFHR5Q9BXR6 569 aa23.16■■□□□ 1.3
UBE2D4-208ENST00000454350 UNCXA6NJT0 531 aa23.15■■□□□ 1.3
UBE2D4-208ENST00000454350 CIAO1O76071 339 aa23.15■■□□□ 1.3
UBE2D4-208ENST00000454350 IFIT1P09914 478 aaKnown RBP23.15■■□□□ 1.3
UBE2D4-208ENST00000454350 LPIN2Q92539 896 aa23.15■■□□□ 1.3
UBE2D4-208ENST00000454350 WNK4Q96J92 1243 aa23.15■■□□□ 1.3
UBE2D4-208ENST00000454350 R3HDMLQ9H3Y0 253 aa23.15■■□□□ 1.3
UBE2D4-208ENST00000454350 LRRFIP2Q9Y608 721 aaKnown RBP23.15■■□□□ 1.3
UBE2D4-208ENST00000454350 GJA5P36382 358 aa23.14■■□□□ 1.29
UBE2D4-208ENST00000454350 NOM1Q5C9Z4 860 aaKnown RBP23.14■■□□□ 1.29
UBE2D4-208ENST00000454350 INTS3Q68E01 1043 aaKnown RBP23.14■■□□□ 1.29
UBE2D4-208ENST00000454350 ZNF296Q8WUU4 475 aaPredicted RBP23.14■■□□□ 1.29
UBE2D4-208ENST00000454350 ARHGAP45Q92619 1136 aa23.14■■□□□ 1.29
UBE2D4-208ENST00000454350 SLC10A4Q96EP9 437 aa23.14■■□□□ 1.29
UBE2D4-208ENST00000454350 MRIQ9BWK5 157 aa23.14■■□□□ 1.29
UBE2D4-208ENST00000454350 FBXO3Q9UK99 471 aa23.14■■□□□ 1.29
UBE2D4-208ENST00000454350 SREBF2Q12772 1141 aa23.13■■□□□ 1.29
UBE2D4-208ENST00000454350 TNFAIP1Q13829 316 aa23.13■■□□□ 1.29
UBE2D4-208ENST00000454350 SIL1Q9H173 461 aa23.13■■□□□ 1.29
UBE2D4-208ENST00000454350 TCP10L2B9ZVM9 353 aa23.12■■□□□ 1.29
UBE2D4-208ENST00000454350 FRAT2O75474 233 aaPredicted RBP23.12■■□□□ 1.29
UBE2D4-208ENST00000454350 ZBTB48P10074 688 aaPredicted RBP23.12■■□□□ 1.29
UBE2D4-208ENST00000454350 SLC5A1P13866 664 aa23.12■■□□□ 1.29
UBE2D4-208ENST00000454350 APOBEC3HQ6NTF7 200 aaKnown RBP23.12■■□□□ 1.29
UBE2D4-208ENST00000454350 CTU1Q7Z7A3 348 aaKnown RBP23.12■■□□□ 1.29
UBE2D4-208ENST00000454350 ZDHHC15Q96MV8 337 aa23.12■■□□□ 1.29
UBE2D4-208ENST00000454350 TMEM39BQ9GZU3 492 aa23.12■■□□□ 1.29
UBE2D4-208ENST00000454350 PA2G4Q9UQ80 394 aaKnown RBP23.12■■□□□ 1.29
UBE2D4-208ENST00000454350 SUGT1Q9Y2Z0 365 aa23.12■■□□□ 1.29
UBE2D4-208ENST00000454350 GPR25O00155 361 aa23.11■■□□□ 1.29
UBE2D4-208ENST00000454350 IREB2P48200 963 aaKnown RBP23.11■■□□□ 1.29
UBE2D4-208ENST00000454350 TEKT1Q969V4 418 aa23.11■■□□□ 1.29
UBE2D4-208ENST00000454350 COPRSQ9NQ92 184 aa23.11■■□□□ 1.29
UBE2D4-208ENST00000454350 TNNQ9UQP3 1299 aa23.11■■□□□ 1.29
UBE2D4-208ENST00000454350 MYH2Q9UKX2 1941 aa23.1■■□□□ 1.29
UBE2D4-208ENST00000454350 MANSC4A6NHS7 340 aaPredicted RBP23.1■■□□□ 1.29
UBE2D4-208ENST00000454350 ANKRD13AQ8IZ07 590 aa23.1■■□□□ 1.29
UBE2D4-208ENST00000454350 IGF2BP3O00425 579 aaKnown RBP eCLIP23.09■■□□□ 1.29
UBE2D4-208ENST00000454350 CACNB3P54284 484 aa23.09■■□□□ 1.29
UBE2D4-208ENST00000454350 INHBEP58166 350 aa23.09■■□□□ 1.29
UBE2D4-208ENST00000454350 ATP2B3Q16720 1220 aa23.09■■□□□ 1.29
UBE2D4-208ENST00000454350 HHIPL2Q6UWX4 724 aa23.09■■□□□ 1.29
UBE2D4-208ENST00000454350 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.09■■□□□ 1.29
UBE2D4-208ENST00000454350 IFNL1Q8IU54 200 aa23.09■■□□□ 1.29
UBE2D4-208ENST00000454350 ZBTB22O15209 634 aa23.08■■□□□ 1.29
UBE2D4-208ENST00000454350 IL15P40933 162 aaPredicted RBP23.08■■□□□ 1.29
UBE2D4-208ENST00000454350 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.08■■□□□ 1.29
UBE2D4-208ENST00000454350 CEP126Q9P2H0 1117 aa23.08■■□□□ 1.29
UBE2D4-208ENST00000454350 AK9Q5TCS8 1911 aa23.08■■□□□ 1.28
UBE2D4-208ENST00000454350 TNRC18O15417 2968 aaPredicted RBP23.07■■□□□ 1.28
UBE2D4-208ENST00000454350 BCAR3O75815 825 aa23.07■■□□□ 1.28
UBE2D4-208ENST00000454350 TRIM27P14373 513 aa23.07■■□□□ 1.28
UBE2D4-208ENST00000454350 MTX1Q13505 466 aa23.07■■□□□ 1.28
UBE2D4-208ENST00000454350 FKBP1CQ5VVH2 108 aa23.07■■□□□ 1.28
UBE2D4-208ENST00000454350 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.07■■□□□ 1.28
UBE2D4-208ENST00000454350 WDR66Q8TBY9 1149 aa23.07■■□□□ 1.28
UBE2D4-208ENST00000454350 MAST3O60307 1309 aa23.07■■□□□ 1.28
UBE2D4-208ENST00000454350 TESPA1A2RU30 521 aaPredicted RBP23.06■■□□□ 1.28
UBE2D4-208ENST00000454350 PHKA1P46020 1223 aa23.06■■□□□ 1.28
UBE2D4-208ENST00000454350 TNNI2P48788 182 aa23.06■■□□□ 1.28
UBE2D4-208ENST00000454350 FAM83AQ86UY5 434 aa23.06■■□□□ 1.28
UBE2D4-208ENST00000454350 PTPN18Q99952 460 aa23.06■■□□□ 1.28
UBE2D4-208ENST00000454350 HDAC5Q9UQL6 1122 aa23.06■■□□□ 1.28
UBE2D4-208ENST00000454350 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.06■■□□□ 1.28
UBE2D4-208ENST00000454350 HTTP42858 3142 aa23.05■■□□□ 1.28
UBE2D4-208ENST00000454350 ALDH1A1P00352 501 aa23.05■■□□□ 1.28
UBE2D4-208ENST00000454350 PRDX5P30044 214 aa23.05■■□□□ 1.28
UBE2D4-208ENST00000454350 ADORA1P30542 326 aa23.05■■□□□ 1.28
UBE2D4-208ENST00000454350 CNKSR2Q8WXI2 1034 aa23.05■■□□□ 1.28
UBE2D4-208ENST00000454350 MS4A4AQ96JQ5 239 aa23.05■■□□□ 1.28
UBE2D4-208ENST00000454350 ELP3Q9H9T3 547 aa23.05■■□□□ 1.28
UBE2D4-208ENST00000454350 GNAI3P08754 354 aa23.04■■□□□ 1.28
UBE2D4-208ENST00000454350 VGLL4Q14135 290 aa23.04■■□□□ 1.28
UBE2D4-208ENST00000454350 ATF7IPQ6VMQ6 1270 aa23.04■■□□□ 1.28
UBE2D4-208ENST00000454350 OPTNQ96CV9 577 aa23.04■■□□□ 1.28
UBE2D4-208ENST00000454350 DAGLAQ9Y4D2 1042 aa23.04■■□□□ 1.28
UBE2D4-208ENST00000454350 PDE4DIPQ5VU43 2346 aa23.04■■□□□ 1.28
UBE2D4-208ENST00000454350 SALL1Q9NSC2 1324 aa23.04■■□□□ 1.28
UBE2D4-208ENST00000454350 RPAP1Q9BWH6 1393 aaPredicted RBP23.03■■□□□ 1.28
UBE2D4-208ENST00000454350 FKTNO75072 461 aa23.03■■□□□ 1.28
UBE2D4-208ENST00000454350 MAP3K9P80192 1104 aa23.03■■□□□ 1.28
UBE2D4-208ENST00000454350 MLLT1Q03111 559 aaPredicted RBP23.03■■□□□ 1.28
UBE2D4-208ENST00000454350 DIXDC1Q155Q3 683 aa23.03■■□□□ 1.28
UBE2D4-208ENST00000454350 PKN2Q16513 984 aaKnown RBP23.03■■□□□ 1.28
UBE2D4-208ENST00000454350 MIER1Q8N108 512 aa23.03■■□□□ 1.28
UBE2D4-208ENST00000454350 HPS5Q9UPZ3 1129 aa23.03■■□□□ 1.28
UBE2D4-208ENST00000454350 CCDC102BQ68D86 513 aa23.02■■□□□ 1.28
UBE2D4-208ENST00000454350 SEMA3EO15041 775 aa23.01■■□□□ 1.27
UBE2D4-208ENST00000454350 IPO8O15397 1037 aaKnown RBP23.01■■□□□ 1.27
UBE2D4-208ENST00000454350 SRGAP3O43295 1099 aa23.01■■□□□ 1.27
UBE2D4-208ENST00000454350 TIMM10P62072 90 aa23.01■■□□□ 1.27
UBE2D4-208ENST00000454350 CDC42EP5Q6NZY7 148 aa23.01■■□□□ 1.27
UBE2D4-208ENST00000454350 GNL3LQ9NVN8 582 aaKnown RBP23■■□□□ 1.27
UBE2D4-208ENST00000454350 TMOD2Q9NZR1 351 aa23■■□□□ 1.27
UBE2D4-208ENST00000454350 DENND2AQ9ULE3 1009 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms