RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ASIC1P78348 528 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 TUBB8Q3ZCM7 444 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 WDR78Q5VTH9 848 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 IQUBQ8NA54 791 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 VAT1LQ9HCJ6 419 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 TTF2Q9UNY4 1162 aaKnown RBP13.62□□□□□ -0.23
SEC16A-207ENST00000453963 ABCC1P33527 1531 aa13.62□□□□□ -0.23
SEC16A-207ENST00000453963 CAPZA3Q96KX2 299 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 HELLSQ9NRZ9 838 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 SLC27A2O14975 620 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 ARHGAP6O43182 974 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 FANCCQ00597 558 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 TRIM14Q14142 442 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 FBF1Q8TES7 1133 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 SIRT1Q96EB6 747 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 MAP3K5Q99683 1374 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 CARD6Q9BX69 1037 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 STX8Q9UNK0 236 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 SLC4A4Q9Y6R1 1079 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 KIF24Q5T7B8 1368 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 HOXC9P31274 260 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 IRX3P78415 501 aaPredicted RBP13.61□□□□□ -0.23
SEC16A-207ENST00000453963 CFAP58Q5T655 872 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 TBC1D5Q92609 795 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 CCDC77Q9BR77 488 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 TRAF1Q13077 416 aa13.61□□□□□ -0.23
SEC16A-207ENST00000453963 DZIP3Q86Y13 1208 aaKnown RBP13.61□□□□□ -0.23
SEC16A-207ENST00000453963 NAPGQ99747 312 aaPredicted RBP13.61□□□□□ -0.23
SEC16A-207ENST00000453963 IQSEC3Q9UPP2 1182 aaPredicted RBP13.61□□□□□ -0.23
SEC16A-207ENST00000453963 KIF4AO95239 1232 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 STAMBPO95630 424 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 CYP7A1P22680 504 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 GSTO1P78417 241 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 TTLL12Q14166 644 aaPredicted RBP13.6□□□□□ -0.23
SEC16A-207ENST00000453963 AFAP1L1Q8TED9 768 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 TSGA10Q9BZW7 698 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 CTTNBP2Q8WZ74 1663 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 ZEB2O60315 1214 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 TBCAO75347 108 aaKnown RBP13.6□□□□□ -0.23
SEC16A-207ENST00000453963 GNAT2P19087 354 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 CCDC122Q5T0U0 273 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 CHST3Q7LGC8 479 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 TTC14Q96N46 770 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 TM6SF1Q9BZW5 370 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 BABAM1Q9NWV8 329 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 RTL9Q8NET4 1388 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 SYCP3Q8IZU3 236 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 ERMNQ8TAM6 284 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 KRT2P35908 639 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 TNNC1P63316 161 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 RILPL1Q5EBL4 403 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 ANO1Q5XXA6 986 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 B4GALNT4Q76KP1 1039 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 CCDC97Q96F63 343 aaPredicted RBP13.6□□□□□ -0.23
SEC16A-207ENST00000453963 CCDC114Q96M63 670 aa13.6□□□□□ -0.23
SEC16A-207ENST00000453963 TPTE2Q6XPS3 522 aa13.59□□□□□ -0.23
SEC16A-207ENST00000453963 IGSF22Q8N9C0 903 aa13.59□□□□□ -0.23
SEC16A-207ENST00000453963 FAM173BQ6P4H8 233 aa13.59□□□□□ -0.23
SEC16A-207ENST00000453963 CPLX4Q7Z7G2 160 aa13.59□□□□□ -0.23
SEC16A-207ENST00000453963 NAA16Q6N069 864 aaPredicted RBP13.59□□□□□ -0.23
SEC16A-207ENST00000453963 CEP57Q86XR8 500 aa13.59□□□□□ -0.23
SEC16A-207ENST00000453963 NEK11Q8NG66 645 aa13.59□□□□□ -0.23
SEC16A-207ENST00000453963 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
SEC16A-207ENST00000453963 PPP1R2P41236 205 aa13.59□□□□□ -0.23
SEC16A-207ENST00000453963 CWF19L2Q2TBE0 894 aaKnown RBP13.59□□□□□ -0.23
SEC16A-207ENST00000453963 MLKLQ8NB16 471 aa13.58□□□□□ -0.24
SEC16A-207ENST00000453963 NLRP12P59046 1061 aa13.58□□□□□ -0.24
SEC16A-207ENST00000453963 TFCP2Q12800 502 aa13.58□□□□□ -0.24
SEC16A-207ENST00000453963 G2E3Q7L622 706 aa13.58□□□□□ -0.24
SEC16A-207ENST00000453963 DDX21Q9NR30 783 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEC16A-207ENST00000453963 CHL1O00533 1208 aa13.58□□□□□ -0.24
SEC16A-207ENST00000453963 CCDC6Q16204 474 aa13.58□□□□□ -0.24
SEC16A-207ENST00000453963 RNMTO43148 476 aaKnown RBP13.57□□□□□ -0.24
SEC16A-207ENST00000453963 CCDC174Q6PII3 467 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 FERMT2Q96AC1 680 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 KCNH3Q9ULD8 1083 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 SAMM50Q9Y512 469 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 SSH2Q76I76 1423 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 RTCBQ9Y3I0 505 aaKnown RBP13.57□□□□□ -0.24
SEC16A-207ENST00000453963 ACTN2P35609 894 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 DNAJC21Q5F1R6 531 aaKnown RBP13.57□□□□□ -0.24
SEC16A-207ENST00000453963 GBP6Q6ZN66 633 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 SLC4A8Q2Y0W8 1093 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 CYP26C1Q6V0L0 522 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 IFT81Q8WYA0 676 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 HOMER2Q9NSB8 354 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 IKBKGQ9Y6K9 419 aa13.57□□□□□ -0.24
SEC16A-207ENST00000453963 CUTAO60888 179 aa13.56□□□□□ -0.24
SEC16A-207ENST00000453963 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
SEC16A-207ENST00000453963 IRS4O14654 1257 aaPredicted RBP13.56□□□□□ -0.24
SEC16A-207ENST00000453963 HOXB7P09629 217 aa13.56□□□□□ -0.24
SEC16A-207ENST00000453963 USP37Q86T82 979 aa13.56□□□□□ -0.24
SEC16A-207ENST00000453963 PCDH11XQ9BZA7 1347 aa13.56□□□□□ -0.24
SEC16A-207ENST00000453963 PCDH11YQ9BZA8 1340 aa13.56□□□□□ -0.24
SEC16A-207ENST00000453963 TMTC1Q8IUR5 882 aa13.56□□□□□ -0.24
SEC16A-207ENST00000453963 FERMT1Q9BQL6 677 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms