RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SLC9C1Q4G0N8 1177 aa7.49□□□□□ -1.21
SBDSP1-204ENST00000453858 NIM1KQ8IY84 436 aa7.49□□□□□ -1.21
SBDSP1-204ENST00000453858 HLA-CQ95604 372 aa7.49□□□□□ -1.21
SBDSP1-204ENST00000453858 THAP11Q96EK4 314 aa7.49□□□□□ -1.21
SBDSP1-204ENST00000453858 COG3Q96JB2 828 aa7.49□□□□□ -1.21
SBDSP1-204ENST00000453858 SETDB2Q96T68 719 aa7.49□□□□□ -1.21
SBDSP1-204ENST00000453858 CDX2Q99626 313 aaPredicted RBP7.49□□□□□ -1.21
SBDSP1-204ENST00000453858 CHD7Q9P2D1 2997 aa7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 UBE2Q2LH0YL09 131 aa7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 H7C1D1 291 aa7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 ALDH1A1P00352 501 aa7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 MYCP01106 439 aaPredicted RBP7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 ST5P78524 1137 aa7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 SREBF2Q12772 1141 aa7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 RTL5Q5HYW3 569 aaPredicted RBP7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 TDHQ8IZJ6 230 aa7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 DPF2Q92785 391 aa7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 VPS33BQ9H267 617 aa7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 IRS2Q9Y4H2 1338 aa7.48□□□□□ -1.21
SBDSP1-204ENST00000453858 GJA8P48165 433 aa7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 MRE11P49959 708 aa7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 MTFR1Q15390 333 aa7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 CRY2Q49AN0 593 aa7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 MSS51Q4VC12 460 aa7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 HDGFL2Q7Z4V5 671 aaPredicted RBP7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 PRR7Q8TB68 274 aa7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 SH3TC2Q8TF17 1288 aa7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 DCPSQ96C86 337 aaKnown RBP7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 MTRQ99707 1265 aa7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 LRFN3Q9BTN0 628 aa7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 PRM3Q9NNZ6 103 aa7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 ASTN2O75129 1339 aaPredicted RBP7.47□□□□□ -1.21
SBDSP1-204ENST00000453858 KIF24Q5T7B8 1368 aa7.46□□□□□ -1.21
SBDSP1-204ENST00000453858 IGF2BP3O00425 579 aaKnown RBP eCLIP7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 AP1G2O75843 785 aa7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 RAD17O75943 681 aa7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 CAMTA2O94983 1202 aa7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 HSP90AB1P08238 724 aaKnown RBP7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 COPS2P61201 443 aa7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 AOC3Q16853 763 aa7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 TBC1D10BQ4KMP7 808 aaPredicted RBP7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 COL26A1Q96A83 441 aa7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 FAM161BQ96MY7 647 aa7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 SPSB2Q99619 263 aa7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 C1QTNF1Q9BXJ1 281 aa7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 RTFDC1Q9BY42 306 aaPredicted RBP7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 TBC1D2BQ9UPU7 963 aa7.46□□□□□ -1.22
SBDSP1-204ENST00000453858 COL2A1P02458 1487 aaPredicted RBP7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 A0A087WZG4 1122 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 YDJCA8MPS7 323 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 PPIP5K2O43314 1243 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 ADH1BP00325 375 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 GJB1P08034 283 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 CANXP27824 592 aaKnown RBP7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 HOXA10P31260 410 aaPredicted RBP7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 INHBEP58166 350 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 SP3Q02447 781 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 TNIP1Q15025 636 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 BCL2L13Q9BXK5 485 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 HCN4Q9Y3Q4 1203 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 DNAH14Q0VDD8 3507 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 ZNF646O15015 1829 aaPredicted RBP7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 FLT4P35916 1363 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 VPS13AQ96RL7 3174 aa7.45□□□□□ -1.22
SBDSP1-204ENST00000453858 ZFHX2Q9C0A1 2572 aaPredicted RBP7.44□□□□□ -1.22
SBDSP1-204ENST00000453858 PRAMEF22A3QJZ6 481 aa7.44□□□□□ -1.22
SBDSP1-204ENST00000453858 FYB1O15117 783 aa7.44□□□□□ -1.22
SBDSP1-204ENST00000453858 CRHR2Q13324 411 aa7.44□□□□□ -1.22
SBDSP1-204ENST00000453858 LAPTM4AQ15012 233 aa7.44□□□□□ -1.22
SBDSP1-204ENST00000453858 SPRYD7Q5W111 196 aa7.44□□□□□ -1.22
SBDSP1-204ENST00000453858 RNF19BQ6ZMZ0 732 aa7.44□□□□□ -1.22
SBDSP1-204ENST00000453858 TMC1Q8TDI8 760 aa7.44□□□□□ -1.22
SBDSP1-204ENST00000453858 SEMA6BQ9H3T3 888 aa7.44□□□□□ -1.22
SBDSP1-204ENST00000453858 TERF2IPQ9NYB0 399 aa7.44□□□□□ -1.22
SBDSP1-204ENST00000453858 SSC5DA1L4H1 1573 aa7.43□□□□□ -1.22
SBDSP1-204ENST00000453858 ZNF292O60281 2723 aa7.43□□□□□ -1.22
SBDSP1-204ENST00000453858 CFAP99D6REC4 459 aa7.43□□□□□ -1.22
SBDSP1-204ENST00000453858 JUNDP17535 347 aa7.43□□□□□ -1.22
SBDSP1-204ENST00000453858 MAGEA10P43363 369 aaPredicted RBP7.43□□□□□ -1.22
SBDSP1-204ENST00000453858 PTPN12Q05209 780 aaKnown RBP7.43□□□□□ -1.22
SBDSP1-204ENST00000453858 MCM6Q14566 821 aa7.43□□□□□ -1.22
SBDSP1-204ENST00000453858 LDLRAD1Q5T700 205 aa7.43□□□□□ -1.22
SBDSP1-204ENST00000453858 USP38Q8NB14 1042 aa7.43□□□□□ -1.22
SBDSP1-204ENST00000453858 NKX2-3Q8TAU0 364 aa7.43□□□□□ -1.22
SBDSP1-204ENST00000453858 ST20-MTHFSA0A0A6YYL1 179 aa7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 MTHFSP49914 203 aa7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 MMP16P51512 607 aa7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 FOXK2Q01167 660 aa7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 LYPD8Q6UX82 237 aa7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 NBPF5PQ86XG9 351 aaPredicted RBP7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 PNMA1Q8ND90 353 aa7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 PTPN18Q99952 460 aa7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 GGA3Q9NZ52 723 aa7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 ALPK3Q96L96 1907 aa7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 RAB3GAP2Q9H2M9 1393 aa7.42□□□□□ -1.22
SBDSP1-204ENST00000453858 RAD21O60216 631 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 FARP2O94887 1054 aaPredicted RBP7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 USP17L8P0C7I0 530 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 CTDSPL2Q05D32 466 aa7.41□□□□□ -1.22
SBDSP1-204ENST00000453858 KIAA2012Q0VF49 1180 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms