RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 BRINP2Q9C0B6 783 aa6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 GPN3Q9UHW5 284 aaPredicted RBP6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 POLR3KQ9Y2Y1 108 aaPredicted RBP6.07□□□□□ -1.44
HMGN3P1-201ENST00000453847 ESYT3A0FGR9 886 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 U2SURPO15042 1029 aaKnown RBP6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 B3GALT4O96024 378 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 NME2P22392 152 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 MCM4P33991 863 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 ZNF252P-AS1Q0IIN9 211 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 RUFY4Q6ZNE9 571 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 FILIP1Q7Z7B0 1213 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 RPUSD2Q8IZ73 545 aaKnown RBP6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 REXO1Q8N1G1 1221 aaKnown RBP6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 MIR1-1HGQ9H1L0 117 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 CLEC4MQ9H2X3 399 aaPredicted RBP6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 EHMT1Q9H9B1 1298 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 FANCLQ9NW38 375 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 DACH1Q9UI36 760 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 ZNRF3Q9ULT6 936 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 SOX13Q9UN79 622 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 CYP8B1Q9UNU6 501 aa6.06□□□□□ -1.44
HMGN3P1-201ENST00000453847 C2CD2LO14523 706 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 ARNTP27540 789 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 CDK8P49336 464 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 ZNF165P49910 485 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 CASP7P55210 303 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 IGBP1P78318 339 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 PCDH1Q08174 1060 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 RASGRF1Q13972 1273 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 TNNI3KQ59H18 835 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 FAM182BQ5T319 152 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 GK5Q6ZS86 529 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 KIAA0907Q7Z7F0 614 aaPredicted RBP6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 PDZD3Q86UT5 571 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 LSRQ86X29 649 aaPredicted RBP6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 CCDC155Q8N6L0 562 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 JMYQ8N9B5 988 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 BSNDQ8WZ55 320 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 GTPBP3Q969Y2 492 aaKnown RBP6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 ZNF837Q96EG3 531 aaPredicted RBP6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 CHMP4AQ9BY43 222 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 ANTXR1Q9H6X2 564 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 PCDH12Q9NPG4 1184 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 DNAJB12Q9NXW2 375 aaKnown RBP6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 CACNA2D2Q9NY47 1150 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 KLF15Q9UIH9 416 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 LEMD3Q9Y2U8 911 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 NOP58Q9Y2X3 529 aaKnown RBP6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 COL4A3BPQ9Y5P4 624 aa6.05□□□□□ -1.44
HMGN3P1-201ENST00000453847 hCG_2014768A0A024R1R8 64 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 H7C1W4 665 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 PDPK1O15530 556 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 MARCH6O60337 910 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 MAN1A2O60476 641 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 CHMP4BP1P59074 171 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 CWF19L2Q2TBE0 894 aaKnown RBP6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 FBXW10Q5XX13 1052 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 CEP135Q66GS9 1140 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 SULF2Q8IWU5 870 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 CRIPAKQ8N1N5 446 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 FERD3LQ96RJ6 166 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 ADAM19Q9H013 955 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 TMEM260Q9NX78 707 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 ACTR10Q9NZ32 417 aa6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 R3HCC1Q9Y3T6 440 aaKnown RBP6.04□□□□□ -1.44
HMGN3P1-201ENST00000453847 B2RBV5 119 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 DIAPH1O60610 1272 aaKnown RBP6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 CDC45O75419 566 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 CLSTN1O94985 981 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 ATE1O95260 518 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 GJB6O95452 261 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 ESRRAP11474 423 aaPredicted RBP6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 FGFR3P22607 806 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 GYS2P54840 703 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 AMPD3Q01432 767 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 TKFCQ3LXA3 575 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 RNF187Q5TA31 235 aaPredicted RBP6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 HGSNATQ68CP4 663 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 STAG1Q8WVM7 1258 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 ATP13A2Q9NQ11 1180 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 NAGPAQ9UK23 515 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 ATXN7L1Q9ULK2 861 aaPredicted RBP6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 MAPK8IP1Q9UQF2 711 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 PCDHB14Q9Y5E9 798 aa6.03□□□□□ -1.44
HMGN3P1-201ENST00000453847 A0A1W2PQH9 124 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 GFRA2O00451 464 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 AXIN1O15169 862 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 DNAJC6O75061 913 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 DGAT1O75907 488 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 PPP2R3AQ06190 1150 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 PERM1Q5SV97 790 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 MRM1Q6IN84 353 aaKnown RBP6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 LLGL2Q6P1M3 1020 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 SPATC1Q76KD6 591 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 SYT9Q86SS6 491 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 OR6P1Q8NGX9 317 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 CRBNQ96SW2 442 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 MDFIQ99750 246 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 IGFLR1Q9H665 355 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms