RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 CHD4Q14839 1912 aa23.74■■□□□ 1.39
PDCD2-204ENST00000453163 ERFEQ4G0M1 354 aa23.74■■□□□ 1.39
PDCD2-204ENST00000453163 C3orf67Q6ZVT6 689 aa23.74■■□□□ 1.39
PDCD2-204ENST00000453163 A0A1B0GUL6 1792 aa23.74■■□□□ 1.39
PDCD2-204ENST00000453163 CEBPZQ03701 1054 aaKnown RBP23.74■■□□□ 1.39
PDCD2-204ENST00000453163 MAP3K12Q12852 859 aa23.74■■□□□ 1.39
PDCD2-204ENST00000453163 CLEC4GQ6UXB4 293 aa23.74■■□□□ 1.39
PDCD2-204ENST00000453163 FTOQ9C0B1 505 aaKnown RBP eCLIP23.74■■□□□ 1.39
PDCD2-204ENST00000453163 DACT1Q9NYF0 836 aa23.74■■□□□ 1.39
PDCD2-204ENST00000453163 ADD1P35611 737 aaKnown RBP23.73■■□□□ 1.39
PDCD2-204ENST00000453163 TRDNQ13061 729 aa23.73■■□□□ 1.39
PDCD2-204ENST00000453163 CAMK4Q16566 473 aa23.73■■□□□ 1.39
PDCD2-204ENST00000453163 NUP62CLQ9H1M0 184 aa23.73■■□□□ 1.39
PDCD2-204ENST00000453163 MBD4O95243 580 aa23.73■■□□□ 1.39
PDCD2-204ENST00000453163 VPS72Q15906 364 aa23.73■■□□□ 1.39
PDCD2-204ENST00000453163 NOL7Q9UMY1 257 aaKnown RBP23.73■■□□□ 1.39
PDCD2-204ENST00000453163 WDR19Q8NEZ3 1342 aa23.73■■□□□ 1.39
PDCD2-204ENST00000453163 C4AP0C0L4 1744 aa23.72■■□□□ 1.39
PDCD2-204ENST00000453163 C4BP0C0L5 1744 aa23.72■■□□□ 1.39
PDCD2-204ENST00000453163 CYB5R4Q7L1T6 521 aa23.72■■□□□ 1.39
PDCD2-204ENST00000453163 EPB41L4AQ9HCS5 686 aaPredicted RBP23.72■■□□□ 1.39
PDCD2-204ENST00000453163 CFAP45Q9UL16 551 aa23.72■■□□□ 1.39
PDCD2-204ENST00000453163 CHMP4CQ96CF2 233 aa23.72■■□□□ 1.39
PDCD2-204ENST00000453163 SCN7AQ01118 1682 aa23.72■■□□□ 1.39
PDCD2-204ENST00000453163 UVSSAQ2YD98 709 aa23.71■■□□□ 1.39
PDCD2-204ENST00000453163 BICDL1Q6ZP65 573 aa23.71■■□□□ 1.39
PDCD2-204ENST00000453163 BICD2Q8TD16 824 aa23.71■■□□□ 1.39
PDCD2-204ENST00000453163 CDC5LQ99459 802 aaKnown RBP23.71■■□□□ 1.39
PDCD2-204ENST00000453163 PDCL3Q9H2J4 239 aa23.71■■□□□ 1.39
PDCD2-204ENST00000453163 ARMT1Q9H993 441 aa23.71■■□□□ 1.39
PDCD2-204ENST00000453163 ZNF500O60304 480 aaPredicted RBP23.71■■□□□ 1.39
PDCD2-204ENST00000453163 USP25Q9UHP3 1055 aa23.71■■□□□ 1.39
PDCD2-204ENST00000453163 NEDD4P46934 1319 aa23.71■■□□□ 1.39
PDCD2-204ENST00000453163 B4E1Z4 1266 aa23.7■■□□□ 1.38
PDCD2-204ENST00000453163 MAP3K11Q16584 847 aa23.7■■□□□ 1.38
PDCD2-204ENST00000453163 ILDR1Q86SU0 546 aaPredicted RBP23.7■■□□□ 1.38
PDCD2-204ENST00000453163 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.7■■□□□ 1.38
PDCD2-204ENST00000453163 IQSEC3Q9UPP2 1182 aaPredicted RBP23.7■■□□□ 1.38
PDCD2-204ENST00000453163 BTAF1O14981 1849 aa23.7■■□□□ 1.38
PDCD2-204ENST00000453163 NR1I2O75469 434 aa23.69■■□□□ 1.38
PDCD2-204ENST00000453163 ANGEL1Q9UNK9 670 aaKnown RBP23.69■■□□□ 1.38
PDCD2-204ENST00000453163 CNTNAP4Q9C0A0 1308 aa23.69■■□□□ 1.38
PDCD2-204ENST00000453163 WTIPA6NIX2 430 aaPredicted RBP23.69■■□□□ 1.38
PDCD2-204ENST00000453163 PATL2C9JE40 543 aaKnown RBP23.69■■□□□ 1.38
PDCD2-204ENST00000453163 OTUD7BQ6GQQ9 843 aa23.69■■□□□ 1.38
PDCD2-204ENST00000453163 IFNL3Q8IZI9 196 aa23.69■■□□□ 1.38
PDCD2-204ENST00000453163 KLHL34Q8N239 644 aa23.69■■□□□ 1.38
PDCD2-204ENST00000453163 USP28Q96RU2 1077 aa23.69■■□□□ 1.38
PDCD2-204ENST00000453163 INCENPQ9NQS7 918 aa23.69■■□□□ 1.38
PDCD2-204ENST00000453163 DHX16O60231 1041 aaKnown RBP23.68■■□□□ 1.38
PDCD2-204ENST00000453163 TBC1D9BQ66K14 1250 aa23.68■■□□□ 1.38
PDCD2-204ENST00000453163 TNMDQ9H2S6 317 aa23.68■■□□□ 1.38
PDCD2-204ENST00000453163 UBAP1LF5GYI3 381 aa23.68■■□□□ 1.38
PDCD2-204ENST00000453163 CCDC192P0DO97 292 aa23.68■■□□□ 1.38
PDCD2-204ENST00000453163 ALX1Q15699 326 aa23.68■■□□□ 1.38
PDCD2-204ENST00000453163 NAPBQ9H115 298 aa23.68■■□□□ 1.38
PDCD2-204ENST00000453163 DDX19AQ9NUU7 478 aaKnown RBP23.68■■□□□ 1.38
PDCD2-204ENST00000453163 ZMYM6O95789 1325 aa23.68■■□□□ 1.38
PDCD2-204ENST00000453163 SH2B2O14492 632 aaPredicted RBP23.67■■□□□ 1.38
PDCD2-204ENST00000453163 CPLX1O14810 134 aa23.67■■□□□ 1.38
PDCD2-204ENST00000453163 ANKRD18AQ8IVF6 992 aa23.67■■□□□ 1.38
PDCD2-204ENST00000453163 CKAP2LQ8IYA6 745 aa23.67■■□□□ 1.38
PDCD2-204ENST00000453163 LCORLQ8N3X6 602 aa23.67■■□□□ 1.38
PDCD2-204ENST00000453163 BCL2L12Q9HB09 334 aa23.67■■□□□ 1.38
PDCD2-204ENST00000453163 SENP2Q9HC62 589 aa23.67■■□□□ 1.38
PDCD2-204ENST00000453163 ORC3Q9UBD5 711 aaPredicted RBP23.67■■□□□ 1.38
PDCD2-204ENST00000453163 PRKAB2O43741 272 aa23.67■■□□□ 1.38
PDCD2-204ENST00000453163 ZMYND15Q9H091 742 aa23.67■■□□□ 1.38
PDCD2-204ENST00000453163 CTDSPL2Q05D32 466 aa23.67■■□□□ 1.38
PDCD2-204ENST00000453163 SF3B3Q15393 1217 aaKnown RBP23.67■■□□□ 1.38
PDCD2-204ENST00000453163 GSG1L2A8MUP6 293 aa23.66■■□□□ 1.38
PDCD2-204ENST00000453163 CLSTN2Q9H4D0 955 aa23.66■■□□□ 1.38
PDCD2-204ENST00000453163 GJB4Q9NTQ9 266 aa23.66■■□□□ 1.38
PDCD2-204ENST00000453163 LRP2BPQ9P2M1 347 aa23.66■■□□□ 1.38
PDCD2-204ENST00000453163 RCOR1Q9UKL0 485 aa23.66■■□□□ 1.38
PDCD2-204ENST00000453163 RXRAP19793 462 aa23.66■■□□□ 1.38
PDCD2-204ENST00000453163 GYG1P46976 350 aa23.66■■□□□ 1.38
PDCD2-204ENST00000453163 FAM182BQ5T319 152 aa23.66■■□□□ 1.38
PDCD2-204ENST00000453163 C8orf76Q96K31 380 aa23.66■■□□□ 1.38
PDCD2-204ENST00000453163 CCDC39Q9UFE4 941 aa23.66■■□□□ 1.38
PDCD2-204ENST00000453163 SRP68Q9UHB9 627 aaKnown RBP23.66■■□□□ 1.38
PDCD2-204ENST00000453163 MIGA1Q8NAN2 632 aa23.65■■□□□ 1.38
PDCD2-204ENST00000453163 TACC3Q9Y6A5 838 aa23.65■■□□□ 1.38
PDCD2-204ENST00000453163 TIAM2Q8IVF5 1701 aa23.65■■□□□ 1.38
PDCD2-204ENST00000453163 GTF2E1P29083 439 aaPredicted RBP23.65■■□□□ 1.38
PDCD2-204ENST00000453163 TYRO3Q06418 890 aa23.65■■□□□ 1.38
PDCD2-204ENST00000453163 PKNOX2Q96KN3 472 aa23.65■■□□□ 1.38
PDCD2-204ENST00000453163 ZNF396Q96N95 335 aaPredicted RBP23.65■■□□□ 1.38
PDCD2-204ENST00000453163 COL1A1P02452 1464 aaPredicted RBP23.65■■□□□ 1.38
PDCD2-204ENST00000453163 ZNF804BA4D1E1 1349 aa23.64■■□□□ 1.38
PDCD2-204ENST00000453163 APOA5Q6Q788 366 aa23.64■■□□□ 1.37
PDCD2-204ENST00000453163 CELF1Q92879 486 aaKnown RBP23.64■■□□□ 1.37
PDCD2-204ENST00000453163 BSDC1Q9NW68 430 aaPredicted RBP23.64■■□□□ 1.37
PDCD2-204ENST00000453163 MRVI1Q9Y6F6 885 aa23.64■■□□□ 1.37
PDCD2-204ENST00000453163 SLC4A4Q9Y6R1 1079 aa23.64■■□□□ 1.37
PDCD2-204ENST00000453163 ECM29Q5VYK3 1845 aa23.63■■□□□ 1.37
PDCD2-204ENST00000453163 ADCY5O95622 1261 aa23.63■■□□□ 1.37
PDCD2-204ENST00000453163 METAP2P50579 478 aaKnown RBP eCLIP23.63■■□□□ 1.37
PDCD2-204ENST00000453163 RBM43Q6ZSC3 357 aaKnown RBP23.63■■□□□ 1.37
PDCD2-204ENST00000453163 FNBP4Q8N3X1 1017 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms